GO Enrichment Analysis of Co-expressed Genes with
AT1G18460
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009661: chromoplast organization | 0.00E+00 |
| 2 | GO:1905157: positive regulation of photosynthesis | 0.00E+00 |
| 3 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 4 | GO:0015970: guanosine tetraphosphate biosynthetic process | 0.00E+00 |
| 5 | GO:1902171: regulation of tocopherol cyclase activity | 0.00E+00 |
| 6 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 7 | GO:0046677: response to antibiotic | 0.00E+00 |
| 8 | GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process | 0.00E+00 |
| 9 | GO:0015995: chlorophyll biosynthetic process | 7.60E-07 |
| 10 | GO:0009640: photomorphogenesis | 2.86E-06 |
| 11 | GO:0009643: photosynthetic acclimation | 9.58E-06 |
| 12 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 9.58E-06 |
| 13 | GO:0050821: protein stabilization | 2.51E-05 |
| 14 | GO:0000305: response to oxygen radical | 5.94E-05 |
| 15 | GO:0010114: response to red light | 8.51E-05 |
| 16 | GO:0046373: L-arabinose metabolic process | 1.44E-04 |
| 17 | GO:0090342: regulation of cell aging | 1.44E-04 |
| 18 | GO:0050992: dimethylallyl diphosphate biosynthetic process | 1.44E-04 |
| 19 | GO:1904143: positive regulation of carotenoid biosynthetic process | 1.44E-04 |
| 20 | GO:0009915: phloem sucrose loading | 1.44E-04 |
| 21 | GO:0042548: regulation of photosynthesis, light reaction | 1.44E-04 |
| 22 | GO:0010017: red or far-red light signaling pathway | 2.14E-04 |
| 23 | GO:0045493: xylan catabolic process | 2.46E-04 |
| 24 | GO:0048575: short-day photoperiodism, flowering | 2.46E-04 |
| 25 | GO:0055114: oxidation-reduction process | 3.02E-04 |
| 26 | GO:0009741: response to brassinosteroid | 3.24E-04 |
| 27 | GO:0051639: actin filament network formation | 3.57E-04 |
| 28 | GO:0007623: circadian rhythm | 4.44E-04 |
| 29 | GO:0051764: actin crosslink formation | 4.78E-04 |
| 30 | GO:0051205: protein insertion into membrane | 4.78E-04 |
| 31 | GO:0006749: glutathione metabolic process | 4.78E-04 |
| 32 | GO:0045038: protein import into chloroplast thylakoid membrane | 6.05E-04 |
| 33 | GO:0016123: xanthophyll biosynthetic process | 6.05E-04 |
| 34 | GO:0016120: carotene biosynthetic process | 6.05E-04 |
| 35 | GO:0032973: amino acid export | 7.40E-04 |
| 36 | GO:0009228: thiamine biosynthetic process | 7.40E-04 |
| 37 | GO:0006655: phosphatidylglycerol biosynthetic process | 7.40E-04 |
| 38 | GO:0009658: chloroplast organization | 7.67E-04 |
| 39 | GO:0009910: negative regulation of flower development | 8.51E-04 |
| 40 | GO:0010189: vitamin E biosynthetic process | 8.82E-04 |
| 41 | GO:0006865: amino acid transport | 8.89E-04 |
| 42 | GO:0051510: regulation of unidimensional cell growth | 1.03E-03 |
| 43 | GO:0043090: amino acid import | 1.03E-03 |
| 44 | GO:1900056: negative regulation of leaf senescence | 1.03E-03 |
| 45 | GO:0080186: developmental vegetative growth | 1.03E-03 |
| 46 | GO:0015979: photosynthesis | 1.17E-03 |
| 47 | GO:0009642: response to light intensity | 1.18E-03 |
| 48 | GO:0045454: cell redox homeostasis | 1.25E-03 |
| 49 | GO:0010100: negative regulation of photomorphogenesis | 1.35E-03 |
| 50 | GO:0071482: cellular response to light stimulus | 1.35E-03 |
| 51 | GO:0009657: plastid organization | 1.35E-03 |
| 52 | GO:0080144: amino acid homeostasis | 1.52E-03 |
| 53 | GO:0048507: meristem development | 1.52E-03 |
| 54 | GO:0010380: regulation of chlorophyll biosynthetic process | 1.69E-03 |
| 55 | GO:0009688: abscisic acid biosynthetic process | 1.88E-03 |
| 56 | GO:0043085: positive regulation of catalytic activity | 2.07E-03 |
| 57 | GO:0030148: sphingolipid biosynthetic process | 2.07E-03 |
| 58 | GO:0015770: sucrose transport | 2.07E-03 |
| 59 | GO:0016925: protein sumoylation | 2.27E-03 |
| 60 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.27E-03 |
| 61 | GO:0009742: brassinosteroid mediated signaling pathway | 2.35E-03 |
| 62 | GO:2000028: regulation of photoperiodism, flowering | 2.47E-03 |
| 63 | GO:0018107: peptidyl-threonine phosphorylation | 2.47E-03 |
| 64 | GO:0009266: response to temperature stimulus | 2.68E-03 |
| 65 | GO:0005985: sucrose metabolic process | 2.89E-03 |
| 66 | GO:0009833: plant-type primary cell wall biogenesis | 3.11E-03 |
| 67 | GO:0034976: response to endoplasmic reticulum stress | 3.11E-03 |
| 68 | GO:0051017: actin filament bundle assembly | 3.34E-03 |
| 69 | GO:0006289: nucleotide-excision repair | 3.34E-03 |
| 70 | GO:0016114: terpenoid biosynthetic process | 3.81E-03 |
| 71 | GO:0070417: cellular response to cold | 4.81E-03 |
| 72 | GO:0006662: glycerol ether metabolic process | 5.34E-03 |
| 73 | GO:0010182: sugar mediated signaling pathway | 5.34E-03 |
| 74 | GO:0010305: leaf vascular tissue pattern formation | 5.34E-03 |
| 75 | GO:0009826: unidimensional cell growth | 5.65E-03 |
| 76 | GO:0008654: phospholipid biosynthetic process | 5.89E-03 |
| 77 | GO:0009791: post-embryonic development | 5.89E-03 |
| 78 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 6.17E-03 |
| 79 | GO:0010193: response to ozone | 6.17E-03 |
| 80 | GO:0009723: response to ethylene | 6.78E-03 |
| 81 | GO:0044550: secondary metabolite biosynthetic process | 7.90E-03 |
| 82 | GO:0010027: thylakoid membrane organization | 7.97E-03 |
| 83 | GO:0030244: cellulose biosynthetic process | 9.59E-03 |
| 84 | GO:0000160: phosphorelay signal transduction system | 9.93E-03 |
| 85 | GO:0010311: lateral root formation | 9.93E-03 |
| 86 | GO:0010218: response to far red light | 1.03E-02 |
| 87 | GO:0007568: aging | 1.06E-02 |
| 88 | GO:0048527: lateral root development | 1.06E-02 |
| 89 | GO:0009637: response to blue light | 1.13E-02 |
| 90 | GO:0034599: cellular response to oxidative stress | 1.17E-02 |
| 91 | GO:0006631: fatty acid metabolic process | 1.28E-02 |
| 92 | GO:0009585: red, far-red light phototransduction | 1.67E-02 |
| 93 | GO:0006813: potassium ion transport | 1.67E-02 |
| 94 | GO:0010224: response to UV-B | 1.71E-02 |
| 95 | GO:0006417: regulation of translation | 1.80E-02 |
| 96 | GO:0009740: gibberellic acid mediated signaling pathway | 2.06E-02 |
| 97 | GO:0009624: response to nematode | 2.15E-02 |
| 98 | GO:0018105: peptidyl-serine phosphorylation | 2.19E-02 |
| 99 | GO:0006396: RNA processing | 2.19E-02 |
| 100 | GO:0006351: transcription, DNA-templated | 2.78E-02 |
| 101 | GO:0009790: embryo development | 2.81E-02 |
| 102 | GO:0040008: regulation of growth | 3.07E-02 |
| 103 | GO:0010150: leaf senescence | 3.17E-02 |
| 104 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.44E-02 |
| 105 | GO:0006468: protein phosphorylation | 3.51E-02 |
| 106 | GO:0006970: response to osmotic stress | 4.56E-02 |
| 107 | GO:0048366: leaf development | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 2 | GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | 0.00E+00 |
| 3 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 4 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 5 | GO:0034639: L-amino acid efflux transmembrane transporter activity | 0.00E+00 |
| 6 | GO:0004462: lactoylglutathione lyase activity | 9.58E-06 |
| 7 | GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | 5.94E-05 |
| 8 | GO:0052631: sphingolipid delta-8 desaturase activity | 5.94E-05 |
| 9 | GO:0019172: glyoxalase III activity | 1.44E-04 |
| 10 | GO:0008728: GTP diphosphokinase activity | 1.44E-04 |
| 11 | GO:0004362: glutathione-disulfide reductase activity | 1.44E-04 |
| 12 | GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity | 1.44E-04 |
| 13 | GO:0016805: dipeptidase activity | 2.46E-04 |
| 14 | GO:0004180: carboxypeptidase activity | 2.46E-04 |
| 15 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 2.46E-04 |
| 16 | GO:0019789: SUMO transferase activity | 3.57E-04 |
| 17 | GO:0022890: inorganic cation transmembrane transporter activity | 3.57E-04 |
| 18 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 3.57E-04 |
| 19 | GO:0009044: xylan 1,4-beta-xylosidase activity | 4.78E-04 |
| 20 | GO:0046556: alpha-L-arabinofuranosidase activity | 4.78E-04 |
| 21 | GO:0070628: proteasome binding | 4.78E-04 |
| 22 | GO:0051538: 3 iron, 4 sulfur cluster binding | 6.05E-04 |
| 23 | GO:0004605: phosphatidate cytidylyltransferase activity | 7.40E-04 |
| 24 | GO:0031593: polyubiquitin binding | 7.40E-04 |
| 25 | GO:0008506: sucrose:proton symporter activity | 1.03E-03 |
| 26 | GO:0005515: protein binding | 1.07E-03 |
| 27 | GO:0071949: FAD binding | 1.52E-03 |
| 28 | GO:0015171: amino acid transmembrane transporter activity | 1.73E-03 |
| 29 | GO:0008047: enzyme activator activity | 1.88E-03 |
| 30 | GO:0015386: potassium:proton antiporter activity | 2.07E-03 |
| 31 | GO:0008515: sucrose transmembrane transporter activity | 2.07E-03 |
| 32 | GO:0016874: ligase activity | 2.09E-03 |
| 33 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.84E-03 |
| 34 | GO:0004190: aspartic-type endopeptidase activity | 2.89E-03 |
| 35 | GO:0004672: protein kinase activity | 2.90E-03 |
| 36 | GO:0003954: NADH dehydrogenase activity | 3.34E-03 |
| 37 | GO:0043130: ubiquitin binding | 3.34E-03 |
| 38 | GO:0015079: potassium ion transmembrane transporter activity | 3.57E-03 |
| 39 | GO:0016760: cellulose synthase (UDP-forming) activity | 4.30E-03 |
| 40 | GO:0003727: single-stranded RNA binding | 4.55E-03 |
| 41 | GO:0003756: protein disulfide isomerase activity | 4.55E-03 |
| 42 | GO:0047134: protein-disulfide reductase activity | 4.81E-03 |
| 43 | GO:0004791: thioredoxin-disulfide reductase activity | 5.61E-03 |
| 44 | GO:0015299: solute:proton antiporter activity | 5.61E-03 |
| 45 | GO:0000156: phosphorelay response regulator activity | 6.75E-03 |
| 46 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 6.75E-03 |
| 47 | GO:0051015: actin filament binding | 6.75E-03 |
| 48 | GO:0016759: cellulose synthase activity | 7.05E-03 |
| 49 | GO:0003684: damaged DNA binding | 7.05E-03 |
| 50 | GO:0005506: iron ion binding | 7.99E-03 |
| 51 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 8.92E-03 |
| 52 | GO:0004871: signal transducer activity | 9.11E-03 |
| 53 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 9.59E-03 |
| 54 | GO:0046872: metal ion binding | 1.06E-02 |
| 55 | GO:0050661: NADP binding | 1.24E-02 |
| 56 | GO:0005524: ATP binding | 1.38E-02 |
| 57 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.43E-02 |
| 58 | GO:0043621: protein self-association | 1.43E-02 |
| 59 | GO:0004674: protein serine/threonine kinase activity | 1.81E-02 |
| 60 | GO:0003779: actin binding | 2.10E-02 |
| 61 | GO:0015035: protein disulfide oxidoreductase activity | 2.19E-02 |
| 62 | GO:0016829: lyase activity | 2.67E-02 |
| 63 | GO:0015144: carbohydrate transmembrane transporter activity | 2.86E-02 |
| 64 | GO:0005351: sugar:proton symporter activity | 3.12E-02 |
| 65 | GO:0003677: DNA binding | 3.68E-02 |
| 66 | GO:0042802: identical protein binding | 3.76E-02 |
| 67 | GO:0016301: kinase activity | 4.11E-02 |
| 68 | GO:0008168: methyltransferase activity | 4.21E-02 |
| 69 | GO:0016788: hydrolase activity, acting on ester bonds | 4.38E-02 |
| 70 | GO:0050660: flavin adenine dinucleotide binding | 4.80E-02 |
| 71 | GO:0008233: peptidase activity | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009535: chloroplast thylakoid membrane | 4.43E-07 |
| 2 | GO:0031969: chloroplast membrane | 7.81E-06 |
| 3 | GO:0009507: chloroplast | 9.68E-05 |
| 4 | GO:0031304: intrinsic component of mitochondrial inner membrane | 1.44E-04 |
| 5 | GO:0042651: thylakoid membrane | 1.75E-04 |
| 6 | GO:0016605: PML body | 2.46E-04 |
| 7 | GO:0032432: actin filament bundle | 3.57E-04 |
| 8 | GO:0030660: Golgi-associated vesicle membrane | 4.78E-04 |
| 9 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 4.78E-04 |
| 10 | GO:0009570: chloroplast stroma | 6.63E-04 |
| 11 | GO:0009534: chloroplast thylakoid | 7.49E-04 |
| 12 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.18E-03 |
| 13 | GO:0009941: chloroplast envelope | 1.24E-03 |
| 14 | GO:0016604: nuclear body | 1.69E-03 |
| 15 | GO:0005765: lysosomal membrane | 2.07E-03 |
| 16 | GO:0005884: actin filament | 2.07E-03 |
| 17 | GO:0009706: chloroplast inner membrane | 2.22E-03 |
| 18 | GO:0005578: proteinaceous extracellular matrix | 2.47E-03 |
| 19 | GO:0030095: chloroplast photosystem II | 2.68E-03 |
| 20 | GO:0005789: endoplasmic reticulum membrane | 1.40E-02 |
| 21 | GO:0016607: nuclear speck | 1.93E-02 |
| 22 | GO:0010008: endosome membrane | 1.93E-02 |
| 23 | GO:0005834: heterotrimeric G-protein complex | 1.97E-02 |
| 24 | GO:0016021: integral component of membrane | 2.11E-02 |
| 25 | GO:0010287: plastoglobule | 2.43E-02 |
| 26 | GO:0009543: chloroplast thylakoid lumen | 2.52E-02 |
| 27 | GO:0005623: cell | 2.57E-02 |
| 28 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.62E-02 |