GO Enrichment Analysis of Co-expressed Genes with
AT1G18440
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 2 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 3 | GO:0042407: cristae formation | 0.00E+00 |
| 4 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 5 | GO:0006573: valine metabolic process | 0.00E+00 |
| 6 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.56E-05 |
| 7 | GO:0006551: leucine metabolic process | 2.19E-05 |
| 8 | GO:0007017: microtubule-based process | 4.24E-05 |
| 9 | GO:0009735: response to cytokinin | 5.42E-05 |
| 10 | GO:0071258: cellular response to gravity | 5.64E-05 |
| 11 | GO:0010424: DNA methylation on cytosine within a CG sequence | 5.64E-05 |
| 12 | GO:0010069: zygote asymmetric cytokinesis in embryo sac | 5.64E-05 |
| 13 | GO:0006423: cysteinyl-tRNA aminoacylation | 5.64E-05 |
| 14 | GO:0006424: glutamyl-tRNA aminoacylation | 1.49E-04 |
| 15 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.49E-04 |
| 16 | GO:0006241: CTP biosynthetic process | 1.49E-04 |
| 17 | GO:0006165: nucleoside diphosphate phosphorylation | 1.49E-04 |
| 18 | GO:0006228: UTP biosynthetic process | 1.49E-04 |
| 19 | GO:0006183: GTP biosynthetic process | 2.04E-04 |
| 20 | GO:0032543: mitochondrial translation | 2.62E-04 |
| 21 | GO:0006796: phosphate-containing compound metabolic process | 3.24E-04 |
| 22 | GO:0009082: branched-chain amino acid biosynthetic process | 3.89E-04 |
| 23 | GO:0009099: valine biosynthetic process | 3.89E-04 |
| 24 | GO:0010555: response to mannitol | 3.89E-04 |
| 25 | GO:0006268: DNA unwinding involved in DNA replication | 3.89E-04 |
| 26 | GO:0042026: protein refolding | 3.89E-04 |
| 27 | GO:0046686: response to cadmium ion | 4.49E-04 |
| 28 | GO:0009642: response to light intensity | 5.25E-04 |
| 29 | GO:0006412: translation | 5.67E-04 |
| 30 | GO:0009097: isoleucine biosynthetic process | 5.98E-04 |
| 31 | GO:0006783: heme biosynthetic process | 6.71E-04 |
| 32 | GO:0006349: regulation of gene expression by genetic imprinting | 7.48E-04 |
| 33 | GO:0043067: regulation of programmed cell death | 7.48E-04 |
| 34 | GO:0006779: porphyrin-containing compound biosynthetic process | 7.48E-04 |
| 35 | GO:0006782: protoporphyrinogen IX biosynthetic process | 8.27E-04 |
| 36 | GO:0010216: maintenance of DNA methylation | 9.07E-04 |
| 37 | GO:0045037: protein import into chloroplast stroma | 9.89E-04 |
| 38 | GO:0006270: DNA replication initiation | 1.16E-03 |
| 39 | GO:0019344: cysteine biosynthetic process | 1.43E-03 |
| 40 | GO:0042742: defense response to bacterium | 1.61E-03 |
| 41 | GO:0042254: ribosome biogenesis | 1.71E-03 |
| 42 | GO:0007005: mitochondrion organization | 1.73E-03 |
| 43 | GO:0009294: DNA mediated transformation | 1.83E-03 |
| 44 | GO:0009411: response to UV | 1.83E-03 |
| 45 | GO:0000413: protein peptidyl-prolyl isomerization | 2.15E-03 |
| 46 | GO:0010197: polar nucleus fusion | 2.26E-03 |
| 47 | GO:0010182: sugar mediated signaling pathway | 2.26E-03 |
| 48 | GO:0009627: systemic acquired resistance | 3.60E-03 |
| 49 | GO:0015995: chlorophyll biosynthetic process | 3.73E-03 |
| 50 | GO:0008219: cell death | 4.00E-03 |
| 51 | GO:0009813: flavonoid biosynthetic process | 4.14E-03 |
| 52 | GO:0009910: negative regulation of flower development | 4.42E-03 |
| 53 | GO:0006631: fatty acid metabolic process | 5.30E-03 |
| 54 | GO:0042542: response to hydrogen peroxide | 5.45E-03 |
| 55 | GO:0008283: cell proliferation | 5.60E-03 |
| 56 | GO:0009585: red, far-red light phototransduction | 6.88E-03 |
| 57 | GO:0006457: protein folding | 6.90E-03 |
| 58 | GO:0009651: response to salt stress | 7.42E-03 |
| 59 | GO:0006414: translational elongation | 7.95E-03 |
| 60 | GO:0016569: covalent chromatin modification | 8.43E-03 |
| 61 | GO:0009790: embryo development | 1.15E-02 |
| 62 | GO:0009409: response to cold | 1.47E-02 |
| 63 | GO:0009658: chloroplast organization | 1.76E-02 |
| 64 | GO:0007049: cell cycle | 1.90E-02 |
| 65 | GO:0015979: photosynthesis | 2.25E-02 |
| 66 | GO:0045454: cell redox homeostasis | 2.33E-02 |
| 67 | GO:0009793: embryo development ending in seed dormancy | 2.51E-02 |
| 68 | GO:0009734: auxin-activated signaling pathway | 3.46E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019843: rRNA binding | 1.18E-06 |
| 2 | GO:0003984: acetolactate synthase activity | 2.19E-05 |
| 3 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 2.19E-05 |
| 4 | GO:0004655: porphobilinogen synthase activity | 2.19E-05 |
| 5 | GO:0004817: cysteine-tRNA ligase activity | 5.64E-05 |
| 6 | GO:0003735: structural constituent of ribosome | 8.81E-05 |
| 7 | GO:0005504: fatty acid binding | 9.94E-05 |
| 8 | GO:0004148: dihydrolipoyl dehydrogenase activity | 9.94E-05 |
| 9 | GO:0005200: structural constituent of cytoskeleton | 1.41E-04 |
| 10 | GO:0004550: nucleoside diphosphate kinase activity | 1.49E-04 |
| 11 | GO:0045430: chalcone isomerase activity | 2.04E-04 |
| 12 | GO:0003746: translation elongation factor activity | 2.70E-04 |
| 13 | GO:0016462: pyrophosphatase activity | 3.24E-04 |
| 14 | GO:0051920: peroxiredoxin activity | 3.89E-04 |
| 15 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 3.89E-04 |
| 16 | GO:0004427: inorganic diphosphatase activity | 4.56E-04 |
| 17 | GO:0016209: antioxidant activity | 5.25E-04 |
| 18 | GO:0003678: DNA helicase activity | 6.71E-04 |
| 19 | GO:0044183: protein binding involved in protein folding | 9.07E-04 |
| 20 | GO:0008094: DNA-dependent ATPase activity | 1.63E-03 |
| 21 | GO:0003729: mRNA binding | 2.65E-03 |
| 22 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 3.09E-03 |
| 23 | GO:0016597: amino acid binding | 3.22E-03 |
| 24 | GO:0030145: manganese ion binding | 4.42E-03 |
| 25 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.23E-03 |
| 26 | GO:0016740: transferase activity | 6.51E-03 |
| 27 | GO:0005507: copper ion binding | 7.59E-03 |
| 28 | GO:0045735: nutrient reservoir activity | 7.73E-03 |
| 29 | GO:0051082: unfolded protein binding | 8.79E-03 |
| 30 | GO:0008565: protein transporter activity | 1.17E-02 |
| 31 | GO:0005515: protein binding | 1.69E-02 |
| 32 | GO:0008168: methyltransferase activity | 1.71E-02 |
| 33 | GO:0000287: magnesium ion binding | 1.74E-02 |
| 34 | GO:0004601: peroxidase activity | 1.76E-02 |
| 35 | GO:0003682: chromatin binding | 1.83E-02 |
| 36 | GO:0052689: carboxylic ester hydrolase activity | 2.20E-02 |
| 37 | GO:0003924: GTPase activity | 2.71E-02 |
| 38 | GO:0009055: electron carrier activity | 2.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005948: acetolactate synthase complex | 0.00E+00 |
| 2 | GO:0009570: chloroplast stroma | 1.09E-20 |
| 3 | GO:0009507: chloroplast | 7.34E-14 |
| 4 | GO:0009941: chloroplast envelope | 2.43E-12 |
| 5 | GO:0009579: thylakoid | 1.94E-07 |
| 6 | GO:0045298: tubulin complex | 8.46E-06 |
| 7 | GO:0000311: plastid large ribosomal subunit | 1.85E-05 |
| 8 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 2.19E-05 |
| 9 | GO:0042555: MCM complex | 2.04E-04 |
| 10 | GO:0048046: apoplast | 2.94E-04 |
| 11 | GO:0009505: plant-type cell wall | 3.19E-04 |
| 12 | GO:0031977: thylakoid lumen | 3.21E-04 |
| 13 | GO:0000347: THO complex | 4.56E-04 |
| 14 | GO:0009539: photosystem II reaction center | 5.98E-04 |
| 15 | GO:0022626: cytosolic ribosome | 6.38E-04 |
| 16 | GO:0031012: extracellular matrix | 1.07E-03 |
| 17 | GO:0046658: anchored component of plasma membrane | 1.44E-03 |
| 18 | GO:0009654: photosystem II oxygen evolving complex | 1.53E-03 |
| 19 | GO:0005840: ribosome | 1.70E-03 |
| 20 | GO:0005618: cell wall | 1.83E-03 |
| 21 | GO:0000790: nuclear chromatin | 2.04E-03 |
| 22 | GO:0009536: plastid | 2.08E-03 |
| 23 | GO:0010319: stromule | 3.09E-03 |
| 24 | GO:0009535: chloroplast thylakoid membrane | 4.45E-03 |
| 25 | GO:0031225: anchored component of membrane | 8.32E-03 |
| 26 | GO:0009706: chloroplast inner membrane | 8.79E-03 |
| 27 | GO:0009543: chloroplast thylakoid lumen | 1.03E-02 |
| 28 | GO:0005623: cell | 1.05E-02 |
| 29 | GO:0005759: mitochondrial matrix | 1.21E-02 |
| 30 | GO:0005874: microtubule | 2.00E-02 |
| 31 | GO:0022625: cytosolic large ribosomal subunit | 2.13E-02 |
| 32 | GO:0005739: mitochondrion | 4.82E-02 |