co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G18250

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032544: plastid translation	5.65E-06
2	GO:1901599: (-)-pinoresinol biosynthetic process	1.97E-05
3	GO:0010424: DNA methylation on cytosine within a CG sequence	5.10E-05
4	GO:0010069: zygote asymmetric cytokinesis in embryo sac	5.10E-05
5	GO:0006065: UDP-glucuronate biosynthetic process	9.05E-05
6	GO:0010583: response to cyclopentenone	9.96E-05
7	GO:0000919: cell plate assembly	1.86E-04
8	GO:0009956: radial pattern formation	1.86E-04
9	GO:0009955: adaxial/abaxial pattern specification	3.57E-04
10	GO:1901259: chloroplast rRNA processing	3.57E-04
11	GO:0048444: floral organ morphogenesis	3.57E-04
12	GO:0010555: response to mannitol	3.57E-04
13	GO:0071669: plant-type cell wall organization or biogenesis	4.19E-04
14	GO:0050790: regulation of catalytic activity	4.19E-04
15	GO:0009642: response to light intensity	4.84E-04
16	GO:0048367: shoot system development	5.01E-04
17	GO:0006526: arginine biosynthetic process	5.50E-04
18	GO:0048589: developmental growth	6.19E-04
19	GO:0006349: regulation of gene expression by genetic imprinting	6.90E-04
20	GO:0006949: syncytium formation	7.62E-04
21	GO:0010216: maintenance of DNA methylation	8.37E-04
22	GO:0010015: root morphogenesis	8.37E-04
23	GO:0009807: lignan biosynthetic process	8.37E-04
24	GO:0050826: response to freezing	9.90E-04
25	GO:0009934: regulation of meristem structural organization	1.07E-03
26	GO:0009933: meristem structural organization	1.07E-03
27	GO:0019344: cysteine biosynthetic process	1.32E-03
28	GO:0007010: cytoskeleton organization	1.32E-03
29	GO:0051302: regulation of cell division	1.41E-03
30	GO:0048278: vesicle docking	1.50E-03
31	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.68E-03
32	GO:0009294: DNA mediated transformation	1.68E-03
33	GO:0000271: polysaccharide biosynthetic process	1.98E-03
34	GO:0000413: protein peptidyl-prolyl isomerization	1.98E-03
35	GO:0010305: leaf vascular tissue pattern formation	2.08E-03
36	GO:0006520: cellular amino acid metabolic process	2.08E-03
37	GO:0061025: membrane fusion	2.18E-03
38	GO:0071554: cell wall organization or biogenesis	2.40E-03
39	GO:0007264: small GTPase mediated signal transduction	2.50E-03
40	GO:0009828: plant-type cell wall loosening	2.73E-03
41	GO:0006906: vesicle fusion	3.31E-03
42	GO:0016311: dephosphorylation	3.55E-03
43	GO:0030244: cellulose biosynthetic process	3.68E-03
44	GO:0048767: root hair elongation	3.80E-03
45	GO:0009813: flavonoid biosynthetic process	3.80E-03
46	GO:0009832: plant-type cell wall biogenesis	3.80E-03
47	GO:0007568: aging	4.06E-03
48	GO:0009910: negative regulation of flower development	4.06E-03
49	GO:0006887: exocytosis	4.86E-03
50	GO:0006631: fatty acid metabolic process	4.86E-03
51	GO:0042546: cell wall biogenesis	5.28E-03
52	GO:0009664: plant-type cell wall organization	6.00E-03
53	GO:0006813: potassium ion transport	6.31E-03
54	GO:0010224: response to UV-B	6.46E-03
55	GO:0016569: covalent chromatin modification	7.72E-03
56	GO:0042742: defense response to bacterium	9.51E-03
57	GO:0071555: cell wall organization	9.51E-03
58	GO:0045490: pectin catabolic process	1.18E-02
59	GO:0009409: response to cold	1.29E-02
60	GO:0046686: response to cadmium ion	1.49E-02
61	GO:0009826: unidimensional cell growth	1.57E-02
62	GO:0006970: response to osmotic stress	1.70E-02
63	GO:0007049: cell cycle	1.74E-02
64	GO:0045454: cell redox homeostasis	2.13E-02
65	GO:0006886: intracellular protein transport	2.18E-02
66	GO:0006869: lipid transport	2.28E-02
67	GO:0048364: root development	2.55E-02
68	GO:0009651: response to salt stress	3.20E-02
69	GO:0009735: response to cytokinin	3.49E-02
70	GO:0051301: cell division	3.96E-02
71	GO:0006457: protein folding	4.48E-02
72	GO:0006412: translation	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	1.97E-05
2	GO:0042349: guiding stereospecific synthesis activity	1.97E-05
3	GO:0005504: fatty acid binding	9.05E-05
4	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	9.05E-05
5	GO:0003979: UDP-glucose 6-dehydrogenase activity	9.05E-05
6	GO:0045430: chalcone isomerase activity	1.86E-04
7	GO:0046527: glucosyltransferase activity	1.86E-04
8	GO:0051920: peroxiredoxin activity	3.57E-04
9	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	3.57E-04
10	GO:0051753: mannan synthase activity	3.57E-04
11	GO:0051287: NAD binding	3.71E-04
12	GO:0016209: antioxidant activity	4.84E-04
13	GO:0005507: copper ion binding	8.89E-04
14	GO:0008324: cation transmembrane transporter activity	1.41E-03
15	GO:0016760: cellulose synthase (UDP-forming) activity	1.68E-03
16	GO:0030570: pectate lyase activity	1.68E-03
17	GO:0005199: structural constituent of cell wall	2.08E-03
18	GO:0005200: structural constituent of cytoskeleton	2.84E-03
19	GO:0009055: electron carrier activity	2.86E-03
20	GO:0016413: O-acetyltransferase activity	2.95E-03
21	GO:0030145: manganese ion binding	4.06E-03
22	GO:0003993: acid phosphatase activity	4.45E-03
23	GO:0000149: SNARE binding	4.58E-03
24	GO:0005484: SNAP receptor activity	5.13E-03
25	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	5.71E-03
26	GO:0045735: nutrient reservoir activity	7.08E-03
27	GO:0019843: rRNA binding	9.42E-03
28	GO:0016829: lyase activity	9.96E-03
29	GO:0042802: identical protein binding	1.40E-02
30	GO:0008168: methyltransferase activity	1.57E-02
31	GO:0004601: peroxidase activity	1.61E-02
32	GO:0003682: chromatin binding	1.67E-02
33	GO:0003735: structural constituent of ribosome	1.90E-02
34	GO:0042803: protein homodimerization activity	2.20E-02
35	GO:0004722: protein serine/threonine phosphatase activity	2.28E-02
36	GO:0003924: GTPase activity	2.47E-02
37	GO:0008289: lipid binding	3.13E-02
38	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.54E-02

Rank	GO Term	Adjusted P value
1	GO:0046658: anchored component of plasma membrane	6.77E-08
2	GO:0031225: anchored component of membrane	7.25E-06
3	GO:0009579: thylakoid	7.01E-05
4	GO:0009570: chloroplast stroma	1.16E-04
5	GO:0048046: apoplast	2.29E-04
6	GO:0005763: mitochondrial small ribosomal subunit	6.19E-04
7	GO:0005886: plasma membrane	8.15E-04
8	GO:0005618: cell wall	1.50E-03
9	GO:0009504: cell plate	2.29E-03
10	GO:0010319: stromule	2.84E-03
11	GO:0009535: chloroplast thylakoid membrane	3.78E-03
12	GO:0031201: SNARE complex	4.86E-03
13	GO:0031977: thylakoid lumen	4.86E-03
14	GO:0005856: cytoskeleton	5.56E-03
15	GO:0012505: endomembrane system	7.89E-03
16	GO:0005576: extracellular region	8.57E-03
17	GO:0009506: plasmodesma	9.33E-03
18	GO:0009941: chloroplast envelope	9.67E-03
19	GO:0009524: phragmoplast	9.78E-03
20	GO:0005840: ribosome	9.97E-03
21	GO:0009507: chloroplast	1.04E-02
22	GO:0009536: plastid	1.17E-02
23	GO:0031969: chloroplast membrane	1.87E-02
24	GO:0016020: membrane	2.56E-02
25	GO:0022626: cytosolic ribosome	3.61E-02
26	GO:0009534: chloroplast thylakoid	4.26E-02