co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G18060

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process	0.00E+00
2	GO:0010205: photoinhibition	1.95E-05
3	GO:0046467: membrane lipid biosynthetic process	3.25E-05
4	GO:0000305: response to oxygen radical	3.25E-05
5	GO:0015979: photosynthesis	3.46E-05
6	GO:0010207: photosystem II assembly	4.55E-05
7	GO:0035304: regulation of protein dephosphorylation	8.18E-05
8	GO:0046902: regulation of mitochondrial membrane permeability	2.11E-04
9	GO:0010363: regulation of plant-type hypersensitive response	2.85E-04
10	GO:0006749: glutathione metabolic process	2.85E-04
11	GO:0042549: photosystem II stabilization	4.48E-04
12	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	4.48E-04
13	GO:0009228: thiamine biosynthetic process	4.48E-04
14	GO:0030091: protein repair	7.22E-04
15	GO:0015996: chlorophyll catabolic process	8.20E-04
16	GO:0009051: pentose-phosphate shunt, oxidative branch	9.20E-04
17	GO:0043067: regulation of programmed cell death	1.02E-03
18	GO:0045036: protein targeting to chloroplast	1.13E-03
19	GO:0019684: photosynthesis, light reaction	1.24E-03
20	GO:0046856: phosphatidylinositol dephosphorylation	1.24E-03
21	GO:0006094: gluconeogenesis	1.47E-03
22	GO:0009767: photosynthetic electron transport chain	1.47E-03
23	GO:2000377: regulation of reactive oxygen species metabolic process	1.99E-03
24	GO:0016114: terpenoid biosynthetic process	2.26E-03
25	GO:0009814: defense response, incompatible interaction	2.40E-03
26	GO:0048653: anther development	3.00E-03
27	GO:0071472: cellular response to salt stress	3.15E-03
28	GO:0010305: leaf vascular tissue pattern formation	3.15E-03
29	GO:0045454: cell redox homeostasis	4.01E-03
30	GO:0071805: potassium ion transmembrane transport	4.32E-03
31	GO:0006810: transport	4.91E-03
32	GO:0015995: chlorophyll biosynthetic process	5.22E-03
33	GO:0007568: aging	6.19E-03
34	GO:0006865: amino acid transport	6.39E-03
35	GO:0034599: cellular response to oxidative stress	6.80E-03
36	GO:0006839: mitochondrial transport	7.22E-03
37	GO:0006364: rRNA processing	9.69E-03
38	GO:0009585: red, far-red light phototransduction	9.69E-03
39	GO:0006813: potassium ion transport	9.69E-03
40	GO:0006096: glycolytic process	1.09E-02
41	GO:0016567: protein ubiquitination	1.24E-02
42	GO:0006979: response to oxidative stress	1.79E-02
43	GO:0042254: ribosome biogenesis	2.53E-02
44	GO:0006629: lipid metabolic process	3.84E-02
45	GO:0008152: metabolic process	4.12E-02

Rank	GO Term	Adjusted P value
1	GO:0051743: red chlorophyll catabolite reductase activity	0.00E+00
2	GO:0010242: oxygen evolving activity	3.25E-05
3	GO:0019172: glyoxalase III activity	8.18E-05
4	GO:0004362: glutathione-disulfide reductase activity	8.18E-05
5	GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity	8.18E-05
6	GO:0017057: 6-phosphogluconolactonase activity	2.11E-04
7	GO:0005471: ATP:ADP antiporter activity	3.65E-04
8	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	4.48E-04
9	GO:0004462: lactoylglutathione lyase activity	4.48E-04
10	GO:0004332: fructose-bisphosphate aldolase activity	4.48E-04
11	GO:0005347: ATP transmembrane transporter activity	5.36E-04
12	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	5.36E-04
13	GO:0004012: phospholipid-translocating ATPase activity	5.36E-04
14	GO:0102425: myricetin 3-O-glucosyltransferase activity	6.27E-04
15	GO:0102360: daphnetin 3-O-glucosyltransferase activity	6.27E-04
16	GO:0047893: flavonol 3-O-glucosyltransferase activity	7.22E-04
17	GO:0047372: acylglycerol lipase activity	1.24E-03
18	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	1.36E-03
19	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.47E-03
20	GO:0008266: poly(U) RNA binding	1.60E-03
21	GO:0015079: potassium ion transmembrane transporter activity	2.12E-03
22	GO:0004176: ATP-dependent peptidase activity	2.26E-03
23	GO:0035251: UDP-glucosyltransferase activity	2.26E-03
24	GO:0048038: quinone binding	3.63E-03
25	GO:0016168: chlorophyll binding	4.85E-03
26	GO:0030145: manganese ion binding	6.19E-03
27	GO:0050661: NADP binding	7.22E-03
28	GO:0016787: hydrolase activity	7.93E-03
29	GO:0015171: amino acid transmembrane transporter activity	1.04E-02
30	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.17E-02
31	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.17E-02
32	GO:0005507: copper ion binding	1.25E-02
33	GO:0005509: calcium ion binding	1.64E-02
34	GO:0003743: translation initiation factor activity	2.04E-02
35	GO:0000287: magnesium ion binding	2.46E-02
36	GO:0050660: flavin adenine dinucleotide binding	2.77E-02
37	GO:0008233: peptidase activity	2.87E-02
38	GO:0009055: electron carrier activity	4.04E-02

Rank	GO Term	Adjusted P value
1	GO:0009535: chloroplast thylakoid membrane	8.87E-13
2	GO:0009507: chloroplast	2.12E-11
3	GO:0009534: chloroplast thylakoid	1.24E-09
4	GO:0010287: plastoglobule	3.16E-06
5	GO:0009579: thylakoid	1.82E-05
6	GO:0031977: thylakoid lumen	2.24E-05
7	GO:0030095: chloroplast photosystem II	4.55E-05
8	GO:0009654: photosystem II oxygen evolving complex	7.49E-05
9	GO:0009543: chloroplast thylakoid lumen	9.86E-05
10	GO:0019898: extrinsic component of membrane	1.69E-04
11	GO:0009570: chloroplast stroma	4.88E-04
12	GO:0009533: chloroplast stromal thylakoid	6.27E-04
13	GO:0009538: photosystem I reaction center	7.22E-04
14	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	9.20E-04
15	GO:0009522: photosystem I	3.31E-03
16	GO:0009523: photosystem II	3.47E-03
17	GO:0016021: integral component of membrane	3.82E-03
18	GO:0009941: chloroplast envelope	5.11E-03
19	GO:0005623: cell	1.48E-02
20	GO:0005743: mitochondrial inner membrane	3.65E-02
21	GO:0043231: intracellular membrane-bounded organelle	4.12E-02