GO Enrichment Analysis of Co-expressed Genes with
AT1G17140
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 2 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 5.06E-06 |
| 3 | GO:0009828: plant-type cell wall loosening | 1.75E-05 |
| 4 | GO:0015995: chlorophyll biosynthetic process | 3.05E-05 |
| 5 | GO:0006949: syncytium formation | 5.49E-05 |
| 6 | GO:0043489: RNA stabilization | 5.64E-05 |
| 7 | GO:0042759: long-chain fatty acid biosynthetic process | 5.64E-05 |
| 8 | GO:0042371: vitamin K biosynthetic process | 5.64E-05 |
| 9 | GO:0009664: plant-type cell wall organization | 1.07E-04 |
| 10 | GO:0006568: tryptophan metabolic process | 1.37E-04 |
| 11 | GO:0090391: granum assembly | 2.34E-04 |
| 12 | GO:0046168: glycerol-3-phosphate catabolic process | 2.34E-04 |
| 13 | GO:0006986: response to unfolded protein | 3.41E-04 |
| 14 | GO:0009413: response to flooding | 3.41E-04 |
| 15 | GO:0051085: chaperone mediated protein folding requiring cofactor | 3.41E-04 |
| 16 | GO:0010239: chloroplast mRNA processing | 3.41E-04 |
| 17 | GO:0006072: glycerol-3-phosphate metabolic process | 3.41E-04 |
| 18 | GO:0045490: pectin catabolic process | 4.05E-04 |
| 19 | GO:0048497: maintenance of floral organ identity | 5.78E-04 |
| 20 | GO:0009826: unidimensional cell growth | 6.70E-04 |
| 21 | GO:0009913: epidermal cell differentiation | 7.07E-04 |
| 22 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 8.44E-04 |
| 23 | GO:1901259: chloroplast rRNA processing | 8.44E-04 |
| 24 | GO:0010196: nonphotochemical quenching | 9.85E-04 |
| 25 | GO:0048564: photosystem I assembly | 1.13E-03 |
| 26 | GO:0045292: mRNA cis splicing, via spliceosome | 1.13E-03 |
| 27 | GO:0006353: DNA-templated transcription, termination | 1.13E-03 |
| 28 | GO:0032544: plastid translation | 1.29E-03 |
| 29 | GO:0010206: photosystem II repair | 1.45E-03 |
| 30 | GO:0000373: Group II intron splicing | 1.45E-03 |
| 31 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.62E-03 |
| 32 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.79E-03 |
| 33 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.16E-03 |
| 34 | GO:0010207: photosystem II assembly | 2.56E-03 |
| 35 | GO:0010143: cutin biosynthetic process | 2.56E-03 |
| 36 | GO:0010025: wax biosynthetic process | 2.97E-03 |
| 37 | GO:0009451: RNA modification | 3.63E-03 |
| 38 | GO:0009739: response to gibberellin | 3.96E-03 |
| 39 | GO:0006457: protein folding | 4.23E-03 |
| 40 | GO:0080022: primary root development | 4.83E-03 |
| 41 | GO:0006412: translation | 4.94E-03 |
| 42 | GO:0042254: ribosome biogenesis | 5.57E-03 |
| 43 | GO:0048825: cotyledon development | 5.61E-03 |
| 44 | GO:0030163: protein catabolic process | 6.43E-03 |
| 45 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 7.01E-03 |
| 46 | GO:0010027: thylakoid membrane organization | 7.59E-03 |
| 47 | GO:0015979: photosynthesis | 7.73E-03 |
| 48 | GO:0009627: systemic acquired resistance | 8.19E-03 |
| 49 | GO:0009631: cold acclimation | 1.01E-02 |
| 50 | GO:0045087: innate immune response | 1.08E-02 |
| 51 | GO:0030001: metal ion transport | 1.18E-02 |
| 52 | GO:0010114: response to red light | 1.29E-02 |
| 53 | GO:0009735: response to cytokinin | 1.63E-02 |
| 54 | GO:0009740: gibberellic acid mediated signaling pathway | 1.96E-02 |
| 55 | GO:0042545: cell wall modification | 2.00E-02 |
| 56 | GO:0006396: RNA processing | 2.09E-02 |
| 57 | GO:0009845: seed germination | 2.54E-02 |
| 58 | GO:0009790: embryo development | 2.68E-02 |
| 59 | GO:0006508: proteolysis | 3.07E-02 |
| 60 | GO:0009658: chloroplast organization | 4.12E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 2 | GO:0016851: magnesium chelatase activity | 1.75E-06 |
| 3 | GO:0019843: rRNA binding | 1.59E-05 |
| 4 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 5.64E-05 |
| 5 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 5.64E-05 |
| 6 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 5.64E-05 |
| 7 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 9.64E-05 |
| 8 | GO:0008266: poly(U) RNA binding | 1.02E-04 |
| 9 | GO:0005528: FK506 binding | 1.46E-04 |
| 10 | GO:0051087: chaperone binding | 1.63E-04 |
| 11 | GO:0030570: pectate lyase activity | 2.18E-04 |
| 12 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 2.34E-04 |
| 13 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 2.34E-04 |
| 14 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 2.34E-04 |
| 15 | GO:0008236: serine-type peptidase activity | 6.60E-04 |
| 16 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 7.07E-04 |
| 17 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 7.07E-04 |
| 18 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 8.44E-04 |
| 19 | GO:0003735: structural constituent of ribosome | 9.19E-04 |
| 20 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 1.13E-03 |
| 21 | GO:0047617: acyl-CoA hydrolase activity | 1.62E-03 |
| 22 | GO:0016829: lyase activity | 2.79E-03 |
| 23 | GO:0004252: serine-type endopeptidase activity | 2.86E-03 |
| 24 | GO:0004176: ATP-dependent peptidase activity | 3.63E-03 |
| 25 | GO:0008080: N-acetyltransferase activity | 5.09E-03 |
| 26 | GO:0016788: hydrolase activity, acting on ester bonds | 5.57E-03 |
| 27 | GO:0004518: nuclease activity | 6.15E-03 |
| 28 | GO:0016791: phosphatase activity | 6.71E-03 |
| 29 | GO:0008483: transaminase activity | 7.00E-03 |
| 30 | GO:0008237: metallopeptidase activity | 7.00E-03 |
| 31 | GO:0003723: RNA binding | 9.97E-03 |
| 32 | GO:0043621: protein self-association | 1.36E-02 |
| 33 | GO:0051287: NAD binding | 1.48E-02 |
| 34 | GO:0016887: ATPase activity | 1.55E-02 |
| 35 | GO:0045330: aspartyl esterase activity | 1.71E-02 |
| 36 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.83E-02 |
| 37 | GO:0030599: pectinesterase activity | 1.96E-02 |
| 38 | GO:0051082: unfolded protein binding | 2.04E-02 |
| 39 | GO:0016746: transferase activity, transferring acyl groups | 2.09E-02 |
| 40 | GO:0030170: pyridoxal phosphate binding | 2.58E-02 |
| 41 | GO:0046910: pectinesterase inhibitor activity | 2.87E-02 |
| 42 | GO:0008168: methyltransferase activity | 4.01E-02 |
| 43 | GO:0016491: oxidoreductase activity | 4.73E-02 |
| 44 | GO:0046983: protein dimerization activity | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009570: chloroplast stroma | 5.49E-14 |
| 2 | GO:0009507: chloroplast | 5.56E-08 |
| 3 | GO:0009941: chloroplast envelope | 6.37E-08 |
| 4 | GO:0010007: magnesium chelatase complex | 7.23E-07 |
| 5 | GO:0009515: granal stacked thylakoid | 5.64E-05 |
| 6 | GO:0009547: plastid ribosome | 5.64E-05 |
| 7 | GO:0009579: thylakoid | 9.27E-05 |
| 8 | GO:0005618: cell wall | 1.72E-04 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 2.66E-04 |
| 10 | GO:0009331: glycerol-3-phosphate dehydrogenase complex | 3.41E-04 |
| 11 | GO:0009533: chloroplast stromal thylakoid | 9.85E-04 |
| 12 | GO:0031977: thylakoid lumen | 1.02E-03 |
| 13 | GO:0009535: chloroplast thylakoid membrane | 1.13E-03 |
| 14 | GO:0005840: ribosome | 1.56E-03 |
| 15 | GO:0009505: plant-type cell wall | 2.05E-03 |
| 16 | GO:0000311: plastid large ribosomal subunit | 2.16E-03 |
| 17 | GO:0000312: plastid small ribosomal subunit | 2.56E-03 |
| 18 | GO:0005759: mitochondrial matrix | 3.23E-03 |
| 19 | GO:0009534: chloroplast thylakoid | 3.87E-03 |
| 20 | GO:0009295: nucleoid | 7.00E-03 |
| 21 | GO:0030529: intracellular ribonucleoprotein complex | 7.59E-03 |
| 22 | GO:0016020: membrane | 8.66E-03 |
| 23 | GO:0005576: extracellular region | 1.11E-02 |
| 24 | GO:0005777: peroxisome | 2.05E-02 |
| 25 | GO:0022627: cytosolic small ribosomal subunit | 3.69E-02 |
| 26 | GO:0009536: plastid | 4.41E-02 |