co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G17070

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
2	GO:0043171: peptide catabolic process	0.00E+00
3	GO:0060213: positive regulation of nuclear-transcribed mRNA poly(A) tail shortening	0.00E+00
4	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
5	GO:0032012: regulation of ARF protein signal transduction	2.75E-06
6	GO:0009409: response to cold	2.50E-05
7	GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic	1.20E-04
8	GO:0009609: response to symbiotic bacterium	1.20E-04
9	GO:0007623: circadian rhythm	1.91E-04
10	GO:0045948: positive regulation of translational initiation	2.77E-04
11	GO:0048209: regulation of vesicle targeting, to, from or within Golgi	2.77E-04
12	GO:0001736: establishment of planar polarity	2.77E-04
13	GO:0032509: endosome transport via multivesicular body sorting pathway	2.77E-04
14	GO:0050684: regulation of mRNA processing	2.77E-04
15	GO:0032784: regulation of DNA-templated transcription, elongation	4.58E-04
16	GO:0042256: mature ribosome assembly	4.58E-04
17	GO:0009269: response to desiccation	4.95E-04
18	GO:0015749: monosaccharide transport	6.57E-04
19	GO:0006882: cellular zinc ion homeostasis	6.57E-04
20	GO:2001289: lipid X metabolic process	6.57E-04
21	GO:0010601: positive regulation of auxin biosynthetic process	6.57E-04
22	GO:0006878: cellular copper ion homeostasis	8.72E-04
23	GO:0006646: phosphatidylethanolamine biosynthetic process	8.72E-04
24	GO:0015743: malate transport	8.72E-04
25	GO:0033320: UDP-D-xylose biosynthetic process	8.72E-04
26	GO:0042273: ribosomal large subunit biogenesis	8.72E-04
27	GO:0006891: intra-Golgi vesicle-mediated transport	9.78E-04
28	GO:0006635: fatty acid beta-oxidation	9.78E-04
29	GO:0042732: D-xylose metabolic process	1.35E-03
30	GO:0010358: leaf shaping	1.35E-03
31	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.47E-03
32	GO:0009414: response to water deprivation	1.57E-03
33	GO:0009942: longitudinal axis specification	1.61E-03
34	GO:0048280: vesicle fusion with Golgi apparatus	1.61E-03
35	GO:0010555: response to mannitol	1.61E-03
36	GO:0000911: cytokinesis by cell plate formation	1.61E-03
37	GO:0006950: response to stress	1.63E-03
38	GO:0009737: response to abscisic acid	1.71E-03
39	GO:1902074: response to salt	1.89E-03
40	GO:0046470: phosphatidylcholine metabolic process	1.89E-03
41	GO:0048437: floral organ development	1.89E-03
42	GO:0006811: ion transport	1.99E-03
43	GO:0010119: regulation of stomatal movement	2.08E-03
44	GO:0009787: regulation of abscisic acid-activated signaling pathway	2.19E-03
45	GO:0009415: response to water	2.19E-03
46	GO:0007155: cell adhesion	2.19E-03
47	GO:0001510: RNA methylation	2.50E-03
48	GO:0006367: transcription initiation from RNA polymerase II promoter	2.50E-03
49	GO:0006972: hyperosmotic response	2.50E-03
50	GO:0009880: embryonic pattern specification	2.50E-03
51	GO:0042542: response to hydrogen peroxide	2.81E-03
52	GO:0046916: cellular transition metal ion homeostasis	2.82E-03
53	GO:2000280: regulation of root development	3.16E-03
54	GO:0006896: Golgi to vacuole transport	3.51E-03
55	GO:0006995: cellular response to nitrogen starvation	3.51E-03
56	GO:0010629: negative regulation of gene expression	3.51E-03
57	GO:0009970: cellular response to sulfate starvation	3.51E-03
58	GO:0048765: root hair cell differentiation	3.88E-03
59	GO:0006886: intracellular protein transport	4.22E-03
60	GO:0016925: protein sumoylation	4.26E-03
61	GO:0010102: lateral root morphogenesis	4.64E-03
62	GO:2000012: regulation of auxin polar transport	4.64E-03
63	GO:0010540: basipetal auxin transport	5.04E-03
64	GO:0009225: nucleotide-sugar metabolic process	5.46E-03
65	GO:0009695: jasmonic acid biosynthetic process	6.76E-03
66	GO:0006979: response to oxidative stress	6.86E-03
67	GO:0009845: seed germination	7.55E-03
68	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	9.17E-03
69	GO:0042147: retrograde transport, endosome to Golgi	9.17E-03
70	GO:0042391: regulation of membrane potential	9.68E-03
71	GO:0000413: protein peptidyl-prolyl isomerization	9.68E-03
72	GO:0010087: phloem or xylem histogenesis	9.68E-03
73	GO:0015031: protein transport	9.75E-03
74	GO:0046323: glucose import	1.02E-02
75	GO:0009738: abscisic acid-activated signaling pathway	1.05E-02
76	GO:0048544: recognition of pollen	1.07E-02
77	GO:0006470: protein dephosphorylation	1.10E-02
78	GO:0008654: phospholipid biosynthetic process	1.13E-02
79	GO:0009556: microsporogenesis	1.13E-02
80	GO:0006623: protein targeting to vacuole	1.13E-02
81	GO:0016567: protein ubiquitination	1.14E-02
82	GO:0010468: regulation of gene expression	1.15E-02
83	GO:0000302: response to reactive oxygen species	1.18E-02
84	GO:0009630: gravitropism	1.24E-02
85	GO:0006914: autophagy	1.36E-02
86	GO:0010286: heat acclimation	1.41E-02
87	GO:0009826: unidimensional cell growth	1.44E-02
88	GO:0009911: positive regulation of flower development	1.54E-02
89	GO:0001666: response to hypoxia	1.54E-02
90	GO:0006970: response to osmotic stress	1.61E-02
91	GO:0006888: ER to Golgi vesicle-mediated transport	1.72E-02
92	GO:0048573: photoperiodism, flowering	1.72E-02
93	GO:0016049: cell growth	1.79E-02
94	GO:0048481: plant ovule development	1.85E-02
95	GO:0030244: cellulose biosynthetic process	1.85E-02
96	GO:0018298: protein-chromophore linkage	1.85E-02
97	GO:0010311: lateral root formation	1.92E-02
98	GO:0016192: vesicle-mediated transport	1.95E-02
99	GO:0009631: cold acclimation	2.05E-02
100	GO:0016051: carbohydrate biosynthetic process	2.19E-02
101	GO:0009637: response to blue light	2.19E-02
102	GO:0006099: tricarboxylic acid cycle	2.26E-02
103	GO:0030001: metal ion transport	2.41E-02
104	GO:0006897: endocytosis	2.48E-02
105	GO:0006631: fatty acid metabolic process	2.48E-02
106	GO:0009926: auxin polar transport	2.63E-02
107	GO:0016042: lipid catabolic process	2.67E-02
108	GO:0009408: response to heat	2.74E-02
109	GO:0009644: response to high light intensity	2.78E-02
110	GO:0000165: MAPK cascade	3.01E-02
111	GO:0042538: hyperosmotic salinity response	3.09E-02
112	GO:0009873: ethylene-activated signaling pathway	3.54E-02
113	GO:0009553: embryo sac development	4.09E-02
114	GO:0009651: response to salt stress	4.11E-02
115	GO:0006396: RNA processing	4.26E-02
116	GO:0009742: brassinosteroid mediated signaling pathway	4.35E-02
117	GO:0009908: flower development	4.39E-02
118	GO:0046686: response to cadmium ion	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0033919: glucan 1,3-alpha-glucosidase activity	0.00E+00
2	GO:0010292: GTP:GDP antiporter activity	0.00E+00
3	GO:0015926: glucosidase activity	0.00E+00
4	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
5	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
6	GO:0005086: ARF guanyl-nucleotide exchange factor activity	1.22E-05
7	GO:0070006: metalloaminopeptidase activity	1.20E-04
8	GO:0009679: hexose:proton symporter activity	1.20E-04
9	GO:0010013: N-1-naphthylphthalamic acid binding	1.20E-04
10	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	1.20E-04
11	GO:0046870: cadmium ion binding	1.20E-04
12	GO:0001047: core promoter binding	2.77E-04
13	GO:0032791: lead ion binding	2.77E-04
14	GO:0004609: phosphatidylserine decarboxylase activity	2.77E-04
15	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	2.77E-04
16	GO:0004839: ubiquitin activating enzyme activity	2.77E-04
17	GO:0004096: catalase activity	4.58E-04
18	GO:0019948: SUMO activating enzyme activity	4.58E-04
19	GO:0004108: citrate (Si)-synthase activity	6.57E-04
20	GO:0004165: dodecenoyl-CoA delta-isomerase activity	6.57E-04
21	GO:0004300: enoyl-CoA hydratase activity	6.57E-04
22	GO:0004722: protein serine/threonine phosphatase activity	8.22E-04
23	GO:0005253: anion channel activity	8.72E-04
24	GO:0042277: peptide binding	8.72E-04
25	GO:0004737: pyruvate decarboxylase activity	8.72E-04
26	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.10E-03
27	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	1.10E-03
28	GO:0015145: monosaccharide transmembrane transporter activity	1.10E-03
29	GO:0008641: small protein activating enzyme activity	1.10E-03
30	GO:0000293: ferric-chelate reductase activity	1.35E-03
31	GO:0031369: translation initiation factor binding	1.35E-03
32	GO:0030976: thiamine pyrophosphate binding	1.35E-03
33	GO:0048040: UDP-glucuronate decarboxylase activity	1.35E-03
34	GO:0004629: phospholipase C activity	1.35E-03
35	GO:0005509: calcium ion binding	1.42E-03
36	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.61E-03
37	GO:0004435: phosphatidylinositol phospholipase C activity	1.61E-03
38	GO:0070403: NAD+ binding	1.61E-03
39	GO:0015140: malate transmembrane transporter activity	1.89E-03
40	GO:0005085: guanyl-nucleotide exchange factor activity	1.89E-03
41	GO:0004620: phospholipase activity	1.89E-03
42	GO:0016831: carboxy-lyase activity	1.89E-03
43	GO:0009881: photoreceptor activity	1.89E-03
44	GO:0050897: cobalt ion binding	2.08E-03
45	GO:0004869: cysteine-type endopeptidase inhibitor activity	2.19E-03
46	GO:0004525: ribonuclease III activity	2.19E-03
47	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.50E-03
48	GO:0004630: phospholipase D activity	2.50E-03
49	GO:0015020: glucuronosyltransferase activity	3.51E-03
50	GO:0004177: aminopeptidase activity	3.88E-03
51	GO:0005515: protein binding	3.90E-03
52	GO:0030552: cAMP binding	5.46E-03
53	GO:0030553: cGMP binding	5.46E-03
54	GO:0005216: ion channel activity	6.76E-03
55	GO:0004707: MAP kinase activity	7.22E-03
56	GO:0004176: ATP-dependent peptidase activity	7.22E-03
57	GO:0003727: single-stranded RNA binding	8.66E-03
58	GO:0005249: voltage-gated potassium channel activity	9.68E-03
59	GO:0030551: cyclic nucleotide binding	9.68E-03
60	GO:0004842: ubiquitin-protein transferase activity	1.11E-02
61	GO:0019901: protein kinase binding	1.13E-02
62	GO:0004872: receptor activity	1.13E-02
63	GO:0008237: metallopeptidase activity	1.41E-02
64	GO:0046982: protein heterodimerization activity	1.47E-02
65	GO:0008375: acetylglucosaminyltransferase activity	1.66E-02
66	GO:0004721: phosphoprotein phosphatase activity	1.72E-02
67	GO:0005096: GTPase activator activity	1.92E-02
68	GO:0004222: metalloendopeptidase activity	1.99E-02
69	GO:0003697: single-stranded DNA binding	2.19E-02
70	GO:0000149: SNARE binding	2.33E-02
71	GO:0005484: SNAP receptor activity	2.63E-02
72	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.93E-02
73	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.25E-02
74	GO:0016874: ligase activity	4.00E-02
75	GO:0016887: ATPase activity	4.24E-02
76	GO:0008026: ATP-dependent helicase activity	4.35E-02
77	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0005783: endoplasmic reticulum	1.04E-05
2	GO:0032777: Piccolo NuA4 histone acetyltransferase complex	2.77E-04
3	GO:0008287: protein serine/threonine phosphatase complex	4.58E-04
4	GO:0005886: plasma membrane	4.67E-04
5	GO:0010008: endosome membrane	5.96E-04
6	GO:0005777: peroxisome	6.09E-04
7	GO:0005776: autophagosome	8.72E-04
8	GO:0030140: trans-Golgi network transport vesicle	1.35E-03
9	GO:0016363: nuclear matrix	1.61E-03
10	GO:0030687: preribosome, large subunit precursor	1.89E-03
11	GO:0000786: nucleosome	2.18E-03
12	GO:0012507: ER to Golgi transport vesicle membrane	2.19E-03
13	GO:0031902: late endosome membrane	2.70E-03
14	GO:0031090: organelle membrane	2.82E-03
15	GO:0031966: mitochondrial membrane	3.66E-03
16	GO:0005665: DNA-directed RNA polymerase II, core complex	4.26E-03
17	GO:0005795: Golgi stack	5.46E-03
18	GO:0031410: cytoplasmic vesicle	7.69E-03
19	GO:0030136: clathrin-coated vesicle	9.17E-03
20	GO:0005770: late endosome	1.02E-02
21	GO:0031965: nuclear membrane	1.13E-02
22	GO:0005789: endoplasmic reticulum membrane	1.29E-02
23	GO:0000932: P-body	1.54E-02
24	GO:0005802: trans-Golgi network	1.99E-02
25	GO:0000325: plant-type vacuole	2.05E-02
26	GO:0031201: SNARE complex	2.48E-02
27	GO:0005634: nucleus	2.64E-02
28	GO:0005773: vacuole	2.94E-02
29	GO:0005829: cytosol	3.39E-02
30	GO:0000139: Golgi membrane	3.89E-02
31	GO:0005623: cell	4.99E-02