co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G16920

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0016553: base conversion or substitution editing	0.00E+00
2	GO:0042493: response to drug	0.00E+00
3	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	0.00E+00
4	GO:0033494: ferulate metabolic process	0.00E+00
5	GO:0006412: translation	3.65E-12
6	GO:0032544: plastid translation	3.99E-08
7	GO:0042254: ribosome biogenesis	1.36E-07
8	GO:0015976: carbon utilization	3.05E-05
9	GO:0000413: protein peptidyl-prolyl isomerization	1.22E-04
10	GO:0043489: RNA stabilization	2.04E-04
11	GO:0010442: guard cell morphogenesis	2.04E-04
12	GO:0042371: vitamin K biosynthetic process	2.04E-04
13	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	2.04E-04
14	GO:0009735: response to cytokinin	3.49E-04
15	GO:0006949: syncytium formation	3.60E-04
16	GO:0045454: cell redox homeostasis	4.49E-04
17	GO:0052541: plant-type cell wall cellulose metabolic process	4.57E-04
18	GO:0006695: cholesterol biosynthetic process	4.57E-04
19	GO:0042742: defense response to bacterium	4.63E-04
20	GO:0006869: lipid transport	5.31E-04
21	GO:0015840: urea transport	7.44E-04
22	GO:0006165: nucleoside diphosphate phosphorylation	1.06E-03
23	GO:0006228: UTP biosynthetic process	1.06E-03
24	GO:0010088: phloem development	1.06E-03
25	GO:0009650: UV protection	1.06E-03
26	GO:0006424: glutamyl-tRNA aminoacylation	1.06E-03
27	GO:0046739: transport of virus in multicellular host	1.06E-03
28	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	1.06E-03
29	GO:0006241: CTP biosynthetic process	1.06E-03
30	GO:0009826: unidimensional cell growth	1.15E-03
31	GO:0009411: response to UV	1.20E-03
32	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.20E-03
33	GO:0019722: calcium-mediated signaling	1.30E-03
34	GO:2000122: negative regulation of stomatal complex development	1.41E-03
35	GO:0010037: response to carbon dioxide	1.41E-03
36	GO:0009956: radial pattern formation	1.41E-03
37	GO:0051322: anaphase	1.41E-03
38	GO:0006085: acetyl-CoA biosynthetic process	1.41E-03
39	GO:0006183: GTP biosynthetic process	1.41E-03
40	GO:0042335: cuticle development	1.51E-03
41	GO:0048359: mucilage metabolic process involved in seed coat development	1.80E-03
42	GO:0032543: mitochondrial translation	1.80E-03
43	GO:0042549: photosystem II stabilization	2.21E-03
44	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.21E-03
45	GO:0009828: plant-type cell wall loosening	2.43E-03
46	GO:0007267: cell-cell signaling	2.58E-03
47	GO:1901259: chloroplast rRNA processing	2.66E-03
48	GO:0042372: phylloquinone biosynthetic process	2.66E-03
49	GO:0009612: response to mechanical stimulus	2.66E-03
50	GO:0006694: steroid biosynthetic process	2.66E-03
51	GO:0048444: floral organ morphogenesis	2.66E-03
52	GO:0010555: response to mannitol	2.66E-03
53	GO:0009955: adaxial/abaxial pattern specification	2.66E-03
54	GO:0009409: response to cold	3.11E-03
55	GO:0009645: response to low light intensity stimulus	3.13E-03
56	GO:0048528: post-embryonic root development	3.13E-03
57	GO:0015995: chlorophyll biosynthetic process	3.40E-03
58	GO:0010411: xyloglucan metabolic process	3.40E-03
59	GO:0009642: response to light intensity	3.63E-03
60	GO:0030091: protein repair	3.63E-03
61	GO:0000028: ribosomal small subunit assembly	3.63E-03
62	GO:0010497: plasmodesmata-mediated intercellular transport	4.15E-03
63	GO:0006526: arginine biosynthetic process	4.15E-03
64	GO:0009808: lignin metabolic process	4.15E-03
65	GO:0009932: cell tip growth	4.15E-03
66	GO:0045337: farnesyl diphosphate biosynthetic process	4.70E-03
67	GO:0033384: geranyl diphosphate biosynthetic process	4.70E-03
68	GO:0006783: heme biosynthetic process	4.70E-03
69	GO:0015780: nucleotide-sugar transport	4.70E-03
70	GO:0006779: porphyrin-containing compound biosynthetic process	5.27E-03
71	GO:0006631: fatty acid metabolic process	5.66E-03
72	GO:0006782: protoporphyrinogen IX biosynthetic process	5.86E-03
73	GO:0042546: cell wall biogenesis	6.38E-03
74	GO:0009773: photosynthetic electron transport in photosystem I	6.48E-03
75	GO:0018119: peptidyl-cysteine S-nitrosylation	6.48E-03
76	GO:0010015: root morphogenesis	6.48E-03
77	GO:0009664: plant-type cell wall organization	7.70E-03
78	GO:0006006: glucose metabolic process	7.78E-03
79	GO:0009725: response to hormone	7.78E-03
80	GO:0006813: potassium ion transport	8.27E-03
81	GO:0009933: meristem structural organization	8.47E-03
82	GO:0019253: reductive pentose-phosphate cycle	8.47E-03
83	GO:0010207: photosystem II assembly	8.47E-03
84	GO:0009934: regulation of meristem structural organization	8.47E-03
85	GO:0010143: cutin biosynthetic process	8.47E-03
86	GO:0006071: glycerol metabolic process	9.90E-03
87	GO:0006833: water transport	9.90E-03
88	GO:0019762: glucosinolate catabolic process	9.90E-03
89	GO:0000027: ribosomal large subunit assembly	1.06E-02
90	GO:0019344: cysteine biosynthetic process	1.06E-02
91	GO:0010026: trichome differentiation	1.14E-02
92	GO:0007017: microtubule-based process	1.14E-02
93	GO:0051302: regulation of cell division	1.14E-02
94	GO:0061077: chaperone-mediated protein folding	1.22E-02
95	GO:0030245: cellulose catabolic process	1.30E-02
96	GO:0016042: lipid catabolic process	1.32E-02
97	GO:0000226: microtubule cytoskeleton organization	1.64E-02
98	GO:0010305: leaf vascular tissue pattern formation	1.73E-02
99	GO:0006520: cellular amino acid metabolic process	1.73E-02
100	GO:0002229: defense response to oomycetes	2.01E-02
101	GO:0016132: brassinosteroid biosynthetic process	2.01E-02
102	GO:0045490: pectin catabolic process	2.05E-02
103	GO:0010583: response to cyclopentenone	2.11E-02
104	GO:0055114: oxidation-reduction process	2.37E-02
105	GO:0071805: potassium ion transmembrane transport	2.41E-02
106	GO:0000910: cytokinesis	2.51E-02
107	GO:0010027: thylakoid membrane organization	2.61E-02
108	GO:0009627: systemic acquired resistance	2.83E-02
109	GO:0016311: dephosphorylation	3.05E-02
110	GO:0009817: defense response to fungus, incompatible interaction	3.16E-02
111	GO:0009813: flavonoid biosynthetic process	3.27E-02
112	GO:0006811: ion transport	3.38E-02
113	GO:0009407: toxin catabolic process	3.38E-02
114	GO:0009834: plant-type secondary cell wall biogenesis	3.38E-02
115	GO:0009631: cold acclimation	3.50E-02
116	GO:0010119: regulation of stomatal movement	3.50E-02
117	GO:0007568: aging	3.50E-02
118	GO:0006810: transport	3.69E-02
119	GO:0045087: innate immune response	3.74E-02
120	GO:0006457: protein folding	3.89E-02
121	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.05E-02
122	GO:0042542: response to hydrogen peroxide	4.35E-02
123	GO:0008283: cell proliferation	4.47E-02
124	GO:0015979: photosynthesis	4.47E-02
125	GO:0008643: carbohydrate transport	4.73E-02
126	GO:0009636: response to toxic substance	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
2	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
3	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
4	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
5	GO:0050614: delta24-sterol reductase activity	0.00E+00
6	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
7	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	0.00E+00
8	GO:0019843: rRNA binding	2.08E-18
9	GO:0003735: structural constituent of ribosome	8.31E-14
10	GO:0051920: peroxiredoxin activity	6.58E-09
11	GO:0016209: antioxidant activity	2.35E-08
12	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	7.24E-06
13	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.13E-04
14	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.65E-04
15	GO:0004655: porphobilinogen synthase activity	2.04E-04
16	GO:0015200: methylammonium transmembrane transporter activity	2.04E-04
17	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	2.04E-04
18	GO:0008289: lipid binding	2.51E-04
19	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	4.57E-04
20	GO:0004089: carbonate dehydratase activity	5.42E-04
21	GO:0008266: poly(U) RNA binding	6.10E-04
22	GO:0050734: hydroxycinnamoyltransferase activity	7.44E-04
23	GO:0004148: dihydrolipoyl dehydrogenase activity	7.44E-04
24	GO:0005504: fatty acid binding	7.44E-04
25	GO:0030267: glyoxylate reductase (NADP) activity	7.44E-04
26	GO:0070330: aromatase activity	7.44E-04
27	GO:0004550: nucleoside diphosphate kinase activity	1.06E-03
28	GO:0001872: (1->3)-beta-D-glucan binding	1.06E-03
29	GO:0003878: ATP citrate synthase activity	1.06E-03
30	GO:0030570: pectate lyase activity	1.20E-03
31	GO:0004601: peroxidase activity	1.21E-03
32	GO:0045430: chalcone isomerase activity	1.41E-03
33	GO:0015204: urea transmembrane transporter activity	1.41E-03
34	GO:0004040: amidase activity	1.80E-03
35	GO:0018685: alkane 1-monooxygenase activity	1.80E-03
36	GO:0052689: carboxylic ester hydrolase activity	1.96E-03
37	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.01E-03
38	GO:0016208: AMP binding	2.21E-03
39	GO:0008200: ion channel inhibitor activity	2.21E-03
40	GO:0008519: ammonium transmembrane transporter activity	2.21E-03
41	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.58E-03
42	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.66E-03
43	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	2.66E-03
44	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.66E-03
45	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.40E-03
46	GO:0052747: sinapyl alcohol dehydrogenase activity	3.63E-03
47	GO:0008889: glycerophosphodiester phosphodiesterase activity	4.70E-03
48	GO:0004337: geranyltranstransferase activity	4.70E-03
49	GO:0003993: acid phosphatase activity	4.98E-03
50	GO:0004161: dimethylallyltranstransferase activity	6.48E-03
51	GO:0016788: hydrolase activity, acting on ester bonds	6.50E-03
52	GO:0045551: cinnamyl-alcohol dehydrogenase activity	7.12E-03
53	GO:0051287: NAD binding	7.43E-03
54	GO:0005528: FK506 binding	1.06E-02
55	GO:0004650: polygalacturonase activity	1.08E-02
56	GO:0015079: potassium ion transmembrane transporter activity	1.14E-02
57	GO:0008324: cation transmembrane transporter activity	1.14E-02
58	GO:0008810: cellulase activity	1.38E-02
59	GO:0008514: organic anion transmembrane transporter activity	1.47E-02
60	GO:0005199: structural constituent of cell wall	1.73E-02
61	GO:0008080: N-acetyltransferase activity	1.73E-02
62	GO:0008017: microtubule binding	2.14E-02
63	GO:0005200: structural constituent of cytoskeleton	2.41E-02
64	GO:0015250: water channel activity	2.61E-02
65	GO:0030247: polysaccharide binding	2.94E-02
66	GO:0102483: scopolin beta-glucosidase activity	2.94E-02
67	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.50E-02
68	GO:0030145: manganese ion binding	3.50E-02
69	GO:0008422: beta-glucosidase activity	3.98E-02
70	GO:0050661: NADP binding	4.10E-02
71	GO:0004364: glutathione transferase activity	4.35E-02
72	GO:0005507: copper ion binding	4.37E-02
73	GO:0051537: 2 iron, 2 sulfur cluster binding	4.73E-02
74	GO:0043621: protein self-association	4.73E-02
75	GO:0004871: signal transducer activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	0.00E+00
2	GO:0044391: ribosomal subunit	0.00E+00
3	GO:0009547: plastid ribosome	0.00E+00
4	GO:0009570: chloroplast stroma	2.52E-27
5	GO:0009941: chloroplast envelope	3.66E-21
6	GO:0009507: chloroplast	5.72E-18
7	GO:0009579: thylakoid	1.66E-14
8	GO:0005840: ribosome	8.34E-14
9	GO:0048046: apoplast	1.41E-12
10	GO:0009535: chloroplast thylakoid membrane	3.17E-09
11	GO:0046658: anchored component of plasma membrane	6.78E-08
12	GO:0009506: plasmodesma	7.22E-08
13	GO:0009505: plant-type cell wall	8.47E-08
14	GO:0009543: chloroplast thylakoid lumen	1.44E-07
15	GO:0031977: thylakoid lumen	1.48E-07
16	GO:0031225: anchored component of membrane	7.30E-07
17	GO:0005618: cell wall	8.67E-07
18	GO:0016020: membrane	1.10E-06
19	GO:0005576: extracellular region	1.25E-06
20	GO:0000311: plastid large ribosomal subunit	1.83E-05
21	GO:0009534: chloroplast thylakoid	2.05E-05
22	GO:0010319: stromule	2.63E-04
23	GO:0000312: plastid small ribosomal subunit	6.10E-04
24	GO:0005886: plasma membrane	6.27E-04
25	GO:0005875: microtubule associated complex	7.58E-04
26	GO:0009346: citrate lyase complex	1.06E-03
27	GO:0022626: cytosolic ribosome	1.64E-03
28	GO:0072686: mitotic spindle	1.80E-03
29	GO:0000793: condensed chromosome	2.21E-03
30	GO:0042807: central vacuole	3.13E-03
31	GO:0000794: condensed nuclear chromosome	3.13E-03
32	GO:0009533: chloroplast stromal thylakoid	3.13E-03
33	GO:0000326: protein storage vacuole	4.15E-03
34	GO:0045298: tubulin complex	4.70E-03
35	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	4.70E-03
36	GO:0000922: spindle pole	4.70E-03
37	GO:0005763: mitochondrial small ribosomal subunit	4.70E-03
38	GO:0005819: spindle	5.20E-03
39	GO:0055028: cortical microtubule	5.86E-03
40	GO:0009574: preprophase band	7.78E-03
41	GO:0031012: extracellular matrix	7.78E-03
42	GO:0005874: microtubule	7.99E-03
43	GO:0030095: chloroplast photosystem II	8.47E-03
44	GO:0022625: cytosolic large ribosomal subunit	8.91E-03
45	GO:0009654: photosystem II oxygen evolving complex	1.14E-02
46	GO:0019898: extrinsic component of membrane	1.92E-02
47	GO:0005778: peroxisomal membrane	2.41E-02
48	GO:0030529: intracellular ribonucleoprotein complex	2.61E-02
49	GO:0022627: cytosolic small ribosomal subunit	2.71E-02
50	GO:0009536: plastid	2.84E-02
51	GO:0015934: large ribosomal subunit	3.50E-02
52	GO:0005773: vacuole	4.25E-02