co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G16080

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080114: positive regulation of glycine hydroxymethyltransferase activity	0.00E+00
2	GO:0015739: sialic acid transport	0.00E+00
3	GO:0033494: ferulate metabolic process	0.00E+00
4	GO:0005996: monosaccharide metabolic process	0.00E+00
5	GO:0007638: mechanosensory behavior	0.00E+00
6	GO:0009773: photosynthetic electron transport in photosystem I	1.28E-11
7	GO:0015979: photosynthesis	2.70E-08
8	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.60E-05
9	GO:0010037: response to carbon dioxide	2.94E-05
10	GO:0015976: carbon utilization	2.94E-05
11	GO:0045727: positive regulation of translation	2.94E-05
12	GO:2000122: negative regulation of stomatal complex development	2.94E-05
13	GO:0071277: cellular response to calcium ion	2.00E-04
14	GO:1904966: positive regulation of vitamin E biosynthetic process	2.00E-04
15	GO:1904964: positive regulation of phytol biosynthetic process	2.00E-04
16	GO:1902458: positive regulation of stomatal opening	2.00E-04
17	GO:0071588: hydrogen peroxide mediated signaling pathway	2.00E-04
18	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	2.00E-04
19	GO:0032544: plastid translation	2.04E-04
20	GO:0006810: transport	2.78E-04
21	GO:0018298: protein-chromophore linkage	4.18E-04
22	GO:0097054: L-glutamate biosynthetic process	4.48E-04
23	GO:1903426: regulation of reactive oxygen species biosynthetic process	4.48E-04
24	GO:0030388: fructose 1,6-bisphosphate metabolic process	4.48E-04
25	GO:1902326: positive regulation of chlorophyll biosynthetic process	4.48E-04
26	GO:0009725: response to hormone	5.25E-04
27	GO:0010207: photosystem II assembly	5.92E-04
28	GO:0071492: cellular response to UV-A	7.29E-04
29	GO:0090506: axillary shoot meristem initiation	7.29E-04
30	GO:0006000: fructose metabolic process	7.29E-04
31	GO:0006636: unsaturated fatty acid biosynthetic process	7.36E-04
32	GO:0009744: response to sucrose	7.78E-04
33	GO:0061077: chaperone-mediated protein folding	9.79E-04
34	GO:0006228: UTP biosynthetic process	1.04E-03
35	GO:0043572: plastid fission	1.04E-03
36	GO:0007231: osmosensory signaling pathway	1.04E-03
37	GO:0006241: CTP biosynthetic process	1.04E-03
38	GO:0006537: glutamate biosynthetic process	1.04E-03
39	GO:0006165: nucleoside diphosphate phosphorylation	1.04E-03
40	GO:0009658: chloroplast organization	1.16E-03
41	GO:0019676: ammonia assimilation cycle	1.38E-03
42	GO:0071486: cellular response to high light intensity	1.38E-03
43	GO:0009765: photosynthesis, light harvesting	1.38E-03
44	GO:0006183: GTP biosynthetic process	1.38E-03
45	GO:0015994: chlorophyll metabolic process	1.38E-03
46	GO:0033500: carbohydrate homeostasis	1.38E-03
47	GO:0071555: cell wall organization	1.60E-03
48	GO:0016120: carotene biosynthetic process	1.76E-03
49	GO:0006656: phosphatidylcholine biosynthetic process	1.76E-03
50	GO:0046785: microtubule polymerization	1.76E-03
51	GO:0045038: protein import into chloroplast thylakoid membrane	1.76E-03
52	GO:0016123: xanthophyll biosynthetic process	1.76E-03
53	GO:0080110: sporopollenin biosynthetic process	1.76E-03
54	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.17E-03
55	GO:0010190: cytochrome b6f complex assembly	2.17E-03
56	GO:0010405: arabinogalactan protein metabolic process	2.17E-03
57	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.17E-03
58	GO:0016554: cytidine to uridine editing	2.17E-03
59	GO:0055114: oxidation-reduction process	2.39E-03
60	GO:0010019: chloroplast-nucleus signaling pathway	2.60E-03
61	GO:0010067: procambium histogenesis	2.60E-03
62	GO:0010027: thylakoid membrane organization	2.80E-03
63	GO:0009395: phospholipid catabolic process	3.06E-03
64	GO:0010196: nonphotochemical quenching	3.06E-03
65	GO:0010411: xyloglucan metabolic process	3.29E-03
66	GO:0007623: circadian rhythm	3.50E-03
67	GO:0009704: de-etiolation	3.55E-03
68	GO:2000070: regulation of response to water deprivation	3.55E-03
69	GO:0009819: drought recovery	3.55E-03
70	GO:0030091: protein repair	3.55E-03
71	GO:0009817: defense response to fungus, incompatible interaction	3.65E-03
72	GO:0017004: cytochrome complex assembly	4.06E-03
73	GO:0006002: fructose 6-phosphate metabolic process	4.06E-03
74	GO:0015996: chlorophyll catabolic process	4.06E-03
75	GO:0007186: G-protein coupled receptor signaling pathway	4.06E-03
76	GO:0009657: plastid organization	4.06E-03
77	GO:0010119: regulation of stomatal movement	4.21E-03
78	GO:0010206: photosystem II repair	4.60E-03
79	GO:0090333: regulation of stomatal closure	4.60E-03
80	GO:0015780: nucleotide-sugar transport	4.60E-03
81	GO:0090305: nucleic acid phosphodiester bond hydrolysis	4.60E-03
82	GO:0034599: cellular response to oxidative stress	4.82E-03
83	GO:0010205: photoinhibition	5.15E-03
84	GO:1900865: chloroplast RNA modification	5.15E-03
85	GO:0043069: negative regulation of programmed cell death	5.74E-03
86	GO:0042546: cell wall biogenesis	6.18E-03
87	GO:0006415: translational termination	6.34E-03
88	GO:0009089: lysine biosynthetic process via diaminopimelate	6.34E-03
89	GO:0043085: positive regulation of catalytic activity	6.34E-03
90	GO:0000272: polysaccharide catabolic process	6.34E-03
91	GO:0018119: peptidyl-cysteine S-nitrosylation	6.34E-03
92	GO:0006816: calcium ion transport	6.34E-03
93	GO:0019684: photosynthesis, light reaction	6.34E-03
94	GO:0009644: response to high light intensity	6.43E-03
95	GO:0008643: carbohydrate transport	6.43E-03
96	GO:0045037: protein import into chloroplast stroma	6.96E-03
97	GO:0006094: gluconeogenesis	7.61E-03
98	GO:0005986: sucrose biosynthetic process	7.61E-03
99	GO:0006364: rRNA processing	8.01E-03
100	GO:0019253: reductive pentose-phosphate cycle	8.28E-03
101	GO:0010223: secondary shoot formation	8.28E-03
102	GO:0010143: cutin biosynthetic process	8.28E-03
103	GO:0010020: chloroplast fission	8.28E-03
104	GO:0070588: calcium ion transmembrane transport	8.97E-03
105	GO:0005985: sucrose metabolic process	8.97E-03
106	GO:0019762: glucosinolate catabolic process	9.68E-03
107	GO:0055085: transmembrane transport	9.94E-03
108	GO:0006487: protein N-linked glycosylation	1.04E-02
109	GO:0009768: photosynthesis, light harvesting in photosystem I	1.12E-02
110	GO:0006869: lipid transport	1.13E-02
111	GO:0031408: oxylipin biosynthetic process	1.19E-02
112	GO:0016998: cell wall macromolecule catabolic process	1.19E-02
113	GO:0016226: iron-sulfur cluster assembly	1.27E-02
114	GO:0019748: secondary metabolic process	1.27E-02
115	GO:0009294: DNA mediated transformation	1.35E-02
116	GO:0001944: vasculature development	1.35E-02
117	GO:0010089: xylem development	1.43E-02
118	GO:0010584: pollen exine formation	1.43E-02
119	GO:0016117: carotenoid biosynthetic process	1.52E-02
120	GO:0010087: phloem or xylem histogenesis	1.60E-02
121	GO:0042631: cellular response to water deprivation	1.60E-02
122	GO:0006662: glycerol ether metabolic process	1.69E-02
123	GO:0010182: sugar mediated signaling pathway	1.69E-02
124	GO:0006633: fatty acid biosynthetic process	1.80E-02
125	GO:0009791: post-embryonic development	1.87E-02
126	GO:0000302: response to reactive oxygen species	1.97E-02
127	GO:0002229: defense response to oomycetes	1.97E-02
128	GO:0042742: defense response to bacterium	2.01E-02
129	GO:0010090: trichome morphogenesis	2.16E-02
130	GO:1901657: glycosyl compound metabolic process	2.16E-02
131	GO:0019760: glucosinolate metabolic process	2.25E-02
132	GO:0009735: response to cytokinin	2.43E-02
133	GO:0016126: sterol biosynthetic process	2.55E-02
134	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.66E-02
135	GO:0009416: response to light stimulus	2.71E-02
136	GO:0009611: response to wounding	2.79E-02
137	GO:0009409: response to cold	3.13E-02
138	GO:0042254: ribosome biogenesis	3.13E-02
139	GO:0000160: phosphorelay signal transduction system	3.20E-02
140	GO:0009407: toxin catabolic process	3.31E-02
141	GO:0010218: response to far red light	3.31E-02
142	GO:0009631: cold acclimation	3.42E-02
143	GO:0009637: response to blue light	3.65E-02
144	GO:0009853: photorespiration	3.65E-02
145	GO:0005975: carbohydrate metabolic process	3.70E-02
146	GO:0046777: protein autophosphorylation	4.06E-02
147	GO:0006631: fatty acid metabolic process	4.13E-02
148	GO:0010114: response to red light	4.37E-02
149	GO:0045454: cell redox homeostasis	4.54E-02
150	GO:0009636: response to toxic substance	4.75E-02
151	GO:0006855: drug transmembrane transport	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
2	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
3	GO:0015136: sialic acid transmembrane transporter activity	0.00E+00
4	GO:0051738: xanthophyll binding	0.00E+00
5	GO:0005456: CMP-N-acetylneuraminate transmembrane transporter activity	0.00E+00
6	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
7	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
8	GO:0016168: chlorophyll binding	7.15E-07
9	GO:0022891: substrate-specific transmembrane transporter activity	2.59E-06
10	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	2.94E-05
11	GO:0051753: mannan synthase activity	9.69E-05
12	GO:0050662: coenzyme binding	1.45E-04
13	GO:0016041: glutamate synthase (ferredoxin) activity	2.00E-04
14	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	2.00E-04
15	GO:0080132: fatty acid alpha-hydroxylase activity	2.00E-04
16	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	2.04E-04
17	GO:0019843: rRNA binding	3.64E-04
18	GO:0008967: phosphoglycolate phosphatase activity	4.48E-04
19	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	4.48E-04
20	GO:0000234: phosphoethanolamine N-methyltransferase activity	4.48E-04
21	GO:0047746: chlorophyllase activity	4.48E-04
22	GO:0042389: omega-3 fatty acid desaturase activity	4.48E-04
23	GO:0010297: heteropolysaccharide binding	4.48E-04
24	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	4.48E-04
25	GO:0004089: carbonate dehydratase activity	5.25E-04
26	GO:0050734: hydroxycinnamoyltransferase activity	7.29E-04
27	GO:0005528: FK506 binding	8.13E-04
28	GO:0016149: translation release factor activity, codon specific	1.04E-03
29	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	1.04E-03
30	GO:0004550: nucleoside diphosphate kinase activity	1.04E-03
31	GO:0043495: protein anchor	1.38E-03
32	GO:0004659: prenyltransferase activity	1.38E-03
33	GO:1990137: plant seed peroxidase activity	1.38E-03
34	GO:0004506: squalene monooxygenase activity	1.38E-03
35	GO:0051538: 3 iron, 4 sulfur cluster binding	1.76E-03
36	GO:0004872: receptor activity	1.82E-03
37	GO:0003824: catalytic activity	1.93E-03
38	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.95E-03
39	GO:0048038: quinone binding	1.95E-03
40	GO:0016688: L-ascorbate peroxidase activity	2.17E-03
41	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.17E-03
42	GO:0004130: cytochrome-c peroxidase activity	2.17E-03
43	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	2.60E-03
44	GO:0051920: peroxiredoxin activity	2.60E-03
45	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.60E-03
46	GO:0019899: enzyme binding	3.06E-03
47	GO:0005338: nucleotide-sugar transmembrane transporter activity	3.06E-03
48	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.29E-03
49	GO:0016209: antioxidant activity	3.55E-03
50	GO:0008135: translation factor activity, RNA binding	4.06E-03
51	GO:0003747: translation release factor activity	4.60E-03
52	GO:0030234: enzyme regulator activity	5.74E-03
53	GO:0008047: enzyme activator activity	5.74E-03
54	GO:0004185: serine-type carboxypeptidase activity	5.94E-03
55	GO:0015386: potassium:proton antiporter activity	6.34E-03
56	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	6.93E-03
57	GO:0031072: heat shock protein binding	7.61E-03
58	GO:0005262: calcium channel activity	7.61E-03
59	GO:0004565: beta-galactosidase activity	7.61E-03
60	GO:0008266: poly(U) RNA binding	8.28E-03
61	GO:0046872: metal ion binding	9.15E-03
62	GO:0016491: oxidoreductase activity	9.36E-03
63	GO:0031409: pigment binding	9.68E-03
64	GO:0051536: iron-sulfur cluster binding	1.04E-02
65	GO:0015079: potassium ion transmembrane transporter activity	1.12E-02
66	GO:0004176: ATP-dependent peptidase activity	1.19E-02
67	GO:0033612: receptor serine/threonine kinase binding	1.19E-02
68	GO:0008514: organic anion transmembrane transporter activity	1.43E-02
69	GO:0047134: protein-disulfide reductase activity	1.52E-02
70	GO:0005102: receptor binding	1.52E-02
71	GO:0004791: thioredoxin-disulfide reductase activity	1.78E-02
72	GO:0008289: lipid binding	2.00E-02
73	GO:0004518: nuclease activity	2.06E-02
74	GO:0000156: phosphorelay response regulator activity	2.16E-02
75	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.16E-02
76	GO:0016759: cellulose synthase activity	2.25E-02
77	GO:0008237: metallopeptidase activity	2.35E-02
78	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.35E-02
79	GO:0008375: acetylglucosaminyltransferase activity	2.76E-02
80	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.76E-02
81	GO:0004683: calmodulin-dependent protein kinase activity	2.87E-02
82	GO:0102483: scopolin beta-glucosidase activity	2.87E-02
83	GO:0008236: serine-type peptidase activity	2.98E-02
84	GO:0016788: hydrolase activity, acting on ester bonds	3.13E-02
85	GO:0015238: drug transmembrane transporter activity	3.20E-02
86	GO:0004222: metalloendopeptidase activity	3.31E-02
87	GO:0003746: translation elongation factor activity	3.65E-02
88	GO:0003993: acid phosphatase activity	3.77E-02
89	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.83E-02
90	GO:0008422: beta-glucosidase activity	3.89E-02
91	GO:0030246: carbohydrate binding	3.92E-02
92	GO:0004364: glutathione transferase activity	4.25E-02
93	GO:0016757: transferase activity, transferring glycosyl groups	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0009575: chromoplast stroma	0.00E+00
2	GO:0009507: chloroplast	2.50E-26
3	GO:0009535: chloroplast thylakoid membrane	2.40E-24
4	GO:0009941: chloroplast envelope	1.04E-12
5	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.96E-12
6	GO:0009534: chloroplast thylakoid	7.74E-11
7	GO:0009570: chloroplast stroma	1.33E-09
8	GO:0048046: apoplast	7.72E-09
9	GO:0009579: thylakoid	1.50E-08
10	GO:0009543: chloroplast thylakoid lumen	2.66E-06
11	GO:0016021: integral component of membrane	2.81E-06
12	GO:0009523: photosystem II	7.23E-06
13	GO:0010319: stromule	1.44E-05
14	GO:0031969: chloroplast membrane	3.04E-04
15	GO:0010287: plastoglobule	3.33E-04
16	GO:0042170: plastid membrane	4.48E-04
17	GO:0000427: plastid-encoded plastid RNA polymerase complex	4.48E-04
18	GO:0009528: plastid inner membrane	7.29E-04
19	GO:0042651: thylakoid membrane	8.95E-04
20	GO:0009527: plastid outer membrane	1.38E-03
21	GO:0009517: PSII associated light-harvesting complex II	1.38E-03
22	GO:0009706: chloroplast inner membrane	1.75E-03
23	GO:0009533: chloroplast stromal thylakoid	3.06E-03
24	GO:0005811: lipid particle	4.06E-03
25	GO:0015934: large ribosomal subunit	4.21E-03
26	GO:0046658: anchored component of plasma membrane	5.00E-03
27	GO:0031977: thylakoid lumen	5.48E-03
28	GO:0055028: cortical microtubule	5.74E-03
29	GO:0030095: chloroplast photosystem II	8.28E-03
30	GO:0030076: light-harvesting complex	8.97E-03
31	GO:0000139: Golgi membrane	9.82E-03
32	GO:0005758: mitochondrial intermembrane space	1.04E-02
33	GO:0009654: photosystem II oxygen evolving complex	1.12E-02
34	GO:0009532: plastid stroma	1.19E-02
35	GO:0031225: anchored component of membrane	1.36E-02
36	GO:0009522: photosystem I	1.78E-02
37	GO:0019898: extrinsic component of membrane	1.87E-02
38	GO:0005840: ribosome	2.15E-02
39	GO:0005615: extracellular space	2.22E-02
40	GO:0009707: chloroplast outer membrane	3.09E-02