GO Enrichment Analysis of Co-expressed Genes with
AT1G15000
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 2 | GO:0006642: triglyceride mobilization | 0.00E+00 |
| 3 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 4 | GO:0006412: translation | 6.83E-11 |
| 5 | GO:0042254: ribosome biogenesis | 4.77E-08 |
| 6 | GO:0032544: plastid translation | 1.04E-07 |
| 7 | GO:0015979: photosynthesis | 3.76E-06 |
| 8 | GO:0009735: response to cytokinin | 2.32E-05 |
| 9 | GO:0046166: glyceraldehyde-3-phosphate biosynthetic process | 4.31E-05 |
| 10 | GO:0043489: RNA stabilization | 4.31E-05 |
| 11 | GO:1904966: positive regulation of vitamin E biosynthetic process | 4.31E-05 |
| 12 | GO:1904964: positive regulation of phytol biosynthetic process | 4.31E-05 |
| 13 | GO:0042371: vitamin K biosynthetic process | 4.31E-05 |
| 14 | GO:0071588: hydrogen peroxide mediated signaling pathway | 4.31E-05 |
| 15 | GO:0010020: chloroplast fission | 6.90E-05 |
| 16 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.07E-04 |
| 17 | GO:0019563: glycerol catabolic process | 1.84E-04 |
| 18 | GO:0071492: cellular response to UV-A | 1.84E-04 |
| 19 | GO:0032504: multicellular organism reproduction | 1.84E-04 |
| 20 | GO:0006424: glutamyl-tRNA aminoacylation | 2.70E-04 |
| 21 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 2.70E-04 |
| 22 | GO:0071486: cellular response to high light intensity | 3.64E-04 |
| 23 | GO:0009658: chloroplast organization | 4.55E-04 |
| 24 | GO:0032543: mitochondrial translation | 4.63E-04 |
| 25 | GO:0031365: N-terminal protein amino acid modification | 4.63E-04 |
| 26 | GO:0006461: protein complex assembly | 4.63E-04 |
| 27 | GO:0009631: cold acclimation | 5.72E-04 |
| 28 | GO:0034599: cellular response to oxidative stress | 6.53E-04 |
| 29 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 6.76E-04 |
| 30 | GO:0010019: chloroplast-nucleus signaling pathway | 6.76E-04 |
| 31 | GO:0006400: tRNA modification | 7.90E-04 |
| 32 | GO:0009657: plastid organization | 1.03E-03 |
| 33 | GO:0006949: syncytium formation | 1.43E-03 |
| 34 | GO:0009773: photosynthetic electron transport in photosystem I | 1.57E-03 |
| 35 | GO:0009073: aromatic amino acid family biosynthetic process | 1.57E-03 |
| 36 | GO:0043085: positive regulation of catalytic activity | 1.57E-03 |
| 37 | GO:0006094: gluconeogenesis | 1.87E-03 |
| 38 | GO:0019253: reductive pentose-phosphate cycle | 2.03E-03 |
| 39 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 3.24E-03 |
| 40 | GO:0080022: primary root development | 3.82E-03 |
| 41 | GO:0006662: glycerol ether metabolic process | 4.02E-03 |
| 42 | GO:0000302: response to reactive oxygen species | 4.64E-03 |
| 43 | GO:0009828: plant-type cell wall loosening | 5.30E-03 |
| 44 | GO:0045454: cell redox homeostasis | 5.75E-03 |
| 45 | GO:0010027: thylakoid membrane organization | 5.98E-03 |
| 46 | GO:0018298: protein-chromophore linkage | 7.19E-03 |
| 47 | GO:0009407: toxin catabolic process | 7.69E-03 |
| 48 | GO:0045087: innate immune response | 8.47E-03 |
| 49 | GO:0030001: metal ion transport | 9.28E-03 |
| 50 | GO:0009644: response to high light intensity | 1.07E-02 |
| 51 | GO:0009636: response to toxic substance | 1.10E-02 |
| 52 | GO:0009664: plant-type cell wall organization | 1.19E-02 |
| 53 | GO:0006096: glycolytic process | 1.40E-02 |
| 54 | GO:0055085: transmembrane transport | 1.60E-02 |
| 55 | GO:0006396: RNA processing | 1.64E-02 |
| 56 | GO:0006508: proteolysis | 1.99E-02 |
| 57 | GO:0042744: hydrogen peroxide catabolic process | 2.06E-02 |
| 58 | GO:0006633: fatty acid biosynthetic process | 2.21E-02 |
| 59 | GO:0009451: RNA modification | 2.40E-02 |
| 60 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 3.05E-02 |
| 61 | GO:0009826: unidimensional cell growth | 3.14E-02 |
| 62 | GO:0009409: response to cold | 3.46E-02 |
| 63 | GO:0006629: lipid metabolic process | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 2 | GO:0019843: rRNA binding | 1.05E-14 |
| 3 | GO:0003735: structural constituent of ribosome | 4.60E-12 |
| 4 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 4.31E-05 |
| 5 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 4.31E-05 |
| 6 | GO:0004807: triose-phosphate isomerase activity | 4.31E-05 |
| 7 | GO:0008266: poly(U) RNA binding | 6.90E-05 |
| 8 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 1.07E-04 |
| 9 | GO:0022891: substrate-specific transmembrane transporter activity | 1.51E-04 |
| 10 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 1.84E-04 |
| 11 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 1.84E-04 |
| 12 | GO:0008097: 5S rRNA binding | 2.70E-04 |
| 13 | GO:0043495: protein anchor | 3.64E-04 |
| 14 | GO:0016836: hydro-lyase activity | 3.64E-04 |
| 15 | GO:0016168: chlorophyll binding | 4.05E-04 |
| 16 | GO:0004130: cytochrome-c peroxidase activity | 5.67E-04 |
| 17 | GO:0016688: L-ascorbate peroxidase activity | 5.67E-04 |
| 18 | GO:0051920: peroxiredoxin activity | 6.76E-04 |
| 19 | GO:0019899: enzyme binding | 7.90E-04 |
| 20 | GO:0008235: metalloexopeptidase activity | 7.90E-04 |
| 21 | GO:0004033: aldo-keto reductase (NADP) activity | 9.08E-04 |
| 22 | GO:0016209: antioxidant activity | 9.08E-04 |
| 23 | GO:0047617: acyl-CoA hydrolase activity | 1.29E-03 |
| 24 | GO:0008047: enzyme activator activity | 1.43E-03 |
| 25 | GO:0004177: aminopeptidase activity | 1.57E-03 |
| 26 | GO:0042802: identical protein binding | 3.20E-03 |
| 27 | GO:0047134: protein-disulfide reductase activity | 3.63E-03 |
| 28 | GO:0050662: coenzyme binding | 4.23E-03 |
| 29 | GO:0004791: thioredoxin-disulfide reductase activity | 4.23E-03 |
| 30 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 5.07E-03 |
| 31 | GO:0003723: RNA binding | 5.39E-03 |
| 32 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 6.94E-03 |
| 33 | GO:0008236: serine-type peptidase activity | 6.94E-03 |
| 34 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 8.74E-03 |
| 35 | GO:0051539: 4 iron, 4 sulfur cluster binding | 9.28E-03 |
| 36 | GO:0004364: glutathione transferase activity | 9.83E-03 |
| 37 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.07E-02 |
| 38 | GO:0005198: structural molecule activity | 1.10E-02 |
| 39 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.13E-02 |
| 40 | GO:0016740: transferase activity | 1.54E-02 |
| 41 | GO:0015035: protein disulfide oxidoreductase activity | 1.64E-02 |
| 42 | GO:0005509: calcium ion binding | 2.36E-02 |
| 43 | GO:0004601: peroxidase activity | 3.22E-02 |
| 44 | GO:0016788: hydrolase activity, acting on ester bonds | 3.27E-02 |
| 45 | GO:0016491: oxidoreductase activity | 3.36E-02 |
| 46 | GO:0003729: mRNA binding | 3.80E-02 |
| 47 | GO:0052689: carboxylic ester hydrolase activity | 4.03E-02 |
| 48 | GO:0042803: protein homodimerization activity | 4.41E-02 |
| 49 | GO:0003924: GTPase activity | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 2 | GO:0009570: chloroplast stroma | 3.19E-27 |
| 3 | GO:0009507: chloroplast | 1.60E-26 |
| 4 | GO:0009941: chloroplast envelope | 2.07E-19 |
| 5 | GO:0009579: thylakoid | 3.60E-15 |
| 6 | GO:0005840: ribosome | 3.45E-12 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 9.10E-12 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 3.97E-09 |
| 9 | GO:0009534: chloroplast thylakoid | 5.80E-09 |
| 10 | GO:0031977: thylakoid lumen | 1.45E-08 |
| 11 | GO:0009523: photosystem II | 6.28E-06 |
| 12 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 4.31E-05 |
| 13 | GO:0009547: plastid ribosome | 4.31E-05 |
| 14 | GO:0000312: plastid small ribosomal subunit | 6.90E-05 |
| 15 | GO:0009654: photosystem II oxygen evolving complex | 1.12E-04 |
| 16 | GO:0042651: thylakoid membrane | 1.12E-04 |
| 17 | GO:0019898: extrinsic component of membrane | 2.46E-04 |
| 18 | GO:0015934: large ribosomal subunit | 5.72E-04 |
| 19 | GO:0009533: chloroplast stromal thylakoid | 7.90E-04 |
| 20 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.16E-03 |
| 21 | GO:0000311: plastid large ribosomal subunit | 1.72E-03 |
| 22 | GO:0030095: chloroplast photosystem II | 2.03E-03 |
| 23 | GO:0015935: small ribosomal subunit | 2.88E-03 |
| 24 | GO:0009532: plastid stroma | 2.88E-03 |
| 25 | GO:0022627: cytosolic small ribosomal subunit | 3.33E-03 |
| 26 | GO:0009295: nucleoid | 5.52E-03 |
| 27 | GO:0010319: stromule | 5.52E-03 |
| 28 | GO:0030529: intracellular ribonucleoprotein complex | 5.98E-03 |
| 29 | GO:0016020: membrane | 9.25E-03 |
| 30 | GO:0022626: cytosolic ribosome | 1.20E-02 |
| 31 | GO:0005777: peroxisome | 1.45E-02 |
| 32 | GO:0009706: chloroplast inner membrane | 1.60E-02 |
| 33 | GO:0009536: plastid | 3.13E-02 |
| 34 | GO:0005874: microtubule | 3.67E-02 |
| 35 | GO:0022625: cytosolic large ribosomal subunit | 3.89E-02 |