co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G13740

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090627: plant epidermal cell differentiation	0.00E+00
2	GO:0010207: photosystem II assembly	1.99E-05
3	GO:0035304: regulation of protein dephosphorylation	4.85E-05
4	GO:0007166: cell surface receptor signaling pathway	6.91E-05
5	GO:0009697: salicylic acid biosynthetic process	2.30E-04
6	GO:0009913: epidermal cell differentiation	2.85E-04
7	GO:0003006: developmental process involved in reproduction	2.85E-04
8	GO:0042549: photosystem II stabilization	2.85E-04
9	GO:0042372: phylloquinone biosynthetic process	3.42E-04
10	GO:0042761: very long-chain fatty acid biosynthetic process	6.61E-04
11	GO:0010205: photoinhibition	6.61E-04
12	GO:0019684: photosynthesis, light reaction	8.02E-04
13	GO:0046856: phosphatidylinositol dephosphorylation	8.02E-04
14	GO:0007623: circadian rhythm	9.17E-04
15	GO:0010025: wax biosynthetic process	1.18E-03
16	GO:0016998: cell wall macromolecule catabolic process	1.44E-03
17	GO:0010017: red or far-red light signaling pathway	1.52E-03
18	GO:0040007: growth	1.61E-03
19	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.61E-03
20	GO:0080022: primary root development	1.89E-03
21	GO:0009958: positive gravitropism	1.99E-03
22	GO:0042752: regulation of circadian rhythm	2.09E-03
23	GO:0048825: cotyledon development	2.19E-03
24	GO:0016032: viral process	2.40E-03
25	GO:0009828: plant-type cell wall loosening	2.61E-03
26	GO:0051607: defense response to virus	2.82E-03
27	GO:0010411: xyloglucan metabolic process	3.28E-03
28	GO:0000160: phosphorelay signal transduction system	3.63E-03
29	GO:0010311: lateral root formation	3.63E-03
30	GO:0016051: carbohydrate biosynthetic process	4.13E-03
31	GO:0030001: metal ion transport	4.51E-03
32	GO:0010114: response to red light	4.91E-03
33	GO:0042546: cell wall biogenesis	5.04E-03
34	GO:0009664: plant-type cell wall organization	5.74E-03
35	GO:0009736: cytokinin-activated signaling pathway	6.02E-03
36	GO:0009624: response to nematode	7.69E-03
37	GO:0009742: brassinosteroid mediated signaling pathway	8.01E-03
38	GO:0071555: cell wall organization	8.89E-03
39	GO:0009058: biosynthetic process	9.33E-03
40	GO:0009845: seed germination	9.51E-03
41	GO:0045490: pectin catabolic process	1.13E-02
42	GO:0009451: RNA modification	1.15E-02
43	GO:0009826: unidimensional cell growth	1.50E-02
44	GO:0006468: protein phosphorylation	1.67E-02
45	GO:0046777: protein autophosphorylation	1.88E-02
46	GO:0009793: embryo development ending in seed dormancy	2.07E-02
47	GO:0009751: response to salicylic acid	2.34E-02
48	GO:0009753: response to jasmonic acid	2.48E-02
49	GO:0006357: regulation of transcription from RNA polymerase II promoter	2.88E-02
50	GO:0009735: response to cytokinin	3.33E-02
51	GO:0006952: defense response	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0008909: isochorismate synthase activity	1.87E-05
2	GO:0010242: oxygen evolving activity	1.87E-05
3	GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity	1.87E-05
4	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	5.07E-05
5	GO:0004445: inositol-polyphosphate 5-phosphatase activity	1.30E-04
6	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	2.85E-04
7	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	7.30E-04
8	GO:0015020: glucuronosyltransferase activity	7.30E-04
9	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	8.75E-04
10	GO:0008266: poly(U) RNA binding	1.02E-03
11	GO:0030570: pectate lyase activity	1.61E-03
12	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.29E-03
13	GO:0000156: phosphorelay response regulator activity	2.50E-03
14	GO:0008375: acetylglucosaminyltransferase activity	3.16E-03
15	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.28E-03
16	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	6.91E-03
17	GO:0016829: lyase activity	9.51E-03
18	GO:0016301: kinase activity	1.21E-02
19	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	2.03E-02
20	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	2.19E-02
21	GO:0004519: endonuclease activity	2.51E-02
22	GO:0008289: lipid binding	2.99E-02
23	GO:0005515: protein binding	3.00E-02
24	GO:0016740: transferase activity	4.09E-02
25	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.33E-02
26	GO:0043565: sequence-specific DNA binding	4.56E-02

Rank	GO Term	Adjusted P value
1	GO:0098572: stromal side of plastid thylakoid membrane	0.00E+00
2	GO:0009534: chloroplast thylakoid	6.28E-05
3	GO:0009535: chloroplast thylakoid membrane	7.35E-05
4	GO:0042646: plastid nucleoid	1.30E-04
5	GO:0016363: nuclear matrix	3.42E-04
6	GO:0042644: chloroplast nucleoid	5.93E-04
7	GO:0009543: chloroplast thylakoid lumen	6.76E-04
8	GO:0009508: plastid chromosome	9.49E-04
9	GO:0005578: proteinaceous extracellular matrix	9.49E-04
10	GO:0030095: chloroplast photosystem II	1.02E-03
11	GO:0009654: photosystem II oxygen evolving complex	1.35E-03
12	GO:0019898: extrinsic component of membrane	2.19E-03
13	GO:0009295: nucleoid	2.72E-03
14	GO:0005819: spindle	4.38E-03
15	GO:0031977: thylakoid lumen	4.64E-03
16	GO:0009579: thylakoid	5.26E-03
17	GO:0005618: cell wall	7.15E-03
18	GO:0009507: chloroplast	8.48E-03
19	GO:0010287: plastoglobule	8.66E-03
20	GO:0009505: plant-type cell wall	1.12E-02
21	GO:0000139: Golgi membrane	1.21E-02
22	GO:0005576: extracellular region	1.98E-02
23	GO:0043231: intracellular membrane-bounded organelle	2.53E-02
24	GO:0048046: apoplast	3.25E-02
25	GO:0005802: trans-Golgi network	4.97E-02