Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G13460

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048867: stem cell fate determination0.00E+00
2GO:0006848: pyruvate transport0.00E+00
3GO:0032012: regulation of ARF protein signal transduction5.93E-08
4GO:0001736: establishment of planar polarity3.42E-05
5GO:0010353: response to trehalose3.42E-05
6GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway6.16E-05
7GO:0032786: positive regulation of DNA-templated transcription, elongation6.16E-05
8GO:0016579: protein deubiquitination7.37E-05
9GO:0080119: ER body organization9.36E-05
10GO:0035194: posttranscriptional gene silencing by RNA2.10E-04
11GO:0009610: response to symbiotic fungus2.99E-04
12GO:0006875: cellular metal ion homeostasis3.46E-04
13GO:0009932: cell tip growth3.94E-04
14GO:0090332: stomatal closure4.96E-04
15GO:0048765: root hair cell differentiation6.03E-04
16GO:0052544: defense response by callose deposition in cell wall6.03E-04
17GO:0010152: pollen maturation6.58E-04
18GO:0006890: retrograde vesicle-mediated transport, Golgi to ER6.58E-04
19GO:0005983: starch catabolic process6.58E-04
20GO:0009725: response to hormone7.14E-04
21GO:0002237: response to molecule of bacterial origin7.72E-04
22GO:0042023: DNA endoreduplication8.91E-04
23GO:0006406: mRNA export from nucleus9.51E-04
24GO:0010073: meristem maintenance1.01E-03
25GO:0006874: cellular calcium ion homeostasis1.01E-03
26GO:0031348: negative regulation of defense response1.14E-03
27GO:0001944: vasculature development1.21E-03
28GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.34E-03
29GO:0042147: retrograde transport, endosome to Golgi1.34E-03
30GO:0010182: sugar mediated signaling pathway1.48E-03
31GO:0006814: sodium ion transport1.56E-03
32GO:0071281: cellular response to iron ion1.86E-03
33GO:0071805: potassium ion transmembrane transport2.02E-03
34GO:0016310: phosphorylation2.19E-03
35GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.26E-03
36GO:0008219: cell death2.61E-03
37GO:0010119: regulation of stomatal movement2.87E-03
38GO:0009631: cold acclimation2.87E-03
39GO:0006897: endocytosis3.43E-03
40GO:0009926: auxin polar transport3.63E-03
41GO:0006511: ubiquitin-dependent protein catabolic process3.82E-03
42GO:0009846: pollen germination4.23E-03
43GO:0009736: cytokinin-activated signaling pathway4.44E-03
44GO:0006813: potassium ion transport4.44E-03
45GO:0006417: regulation of translation4.76E-03
46GO:0006396: RNA processing5.77E-03
47GO:0000398: mRNA splicing, via spliceosome6.24E-03
48GO:0015031: protein transport7.21E-03
49GO:0016036: cellular response to phosphate starvation7.87E-03
50GO:0010150: leaf senescence8.26E-03
51GO:0009826: unidimensional cell growth1.09E-02
52GO:0006970: response to osmotic stress1.18E-02
53GO:0009723: response to ethylene1.24E-02
54GO:0045892: negative regulation of transcription, DNA-templated1.50E-02
55GO:0009408: response to heat1.72E-02
56GO:0009753: response to jasmonic acid1.81E-02
57GO:0009651: response to salt stress1.91E-02
58GO:0009873: ethylene-activated signaling pathway2.07E-02
59GO:0009734: auxin-activated signaling pathway2.20E-02
60GO:0009738: abscisic acid-activated signaling pathway2.53E-02
61GO:0051301: cell division2.76E-02
62GO:0045893: positive regulation of transcription, DNA-templated2.86E-02
63GO:0055085: transmembrane transport3.07E-02
64GO:0009414: response to water deprivation4.21E-02
65GO:0042742: defense response to bacterium4.29E-02
66GO:0006979: response to oxidative stress4.31E-02
RankGO TermAdjusted P value
1GO:0005086: ARF guanyl-nucleotide exchange factor activity2.87E-07
2GO:0050521: alpha-glucan, water dikinase activity1.30E-05
3GO:0000978: RNA polymerase II core promoter proximal region sequence-specific DNA binding1.30E-05
4GO:0030371: translation repressor activity1.30E-05
5GO:0036459: thiol-dependent ubiquitinyl hydrolase activity2.20E-05
6GO:0001078: transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding3.42E-05
7GO:0004843: thiol-dependent ubiquitin-specific protease activity5.15E-05
8GO:0019829: cation-transporting ATPase activity6.16E-05
9GO:0050833: pyruvate transmembrane transporter activity6.16E-05
10GO:0000285: 1-phosphatidylinositol-3-phosphate 5-kinase activity9.36E-05
11GO:0003729: mRNA binding1.41E-04
12GO:0003730: mRNA 3'-UTR binding2.53E-04
13GO:0005085: guanyl-nucleotide exchange factor activity2.99E-04
14GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity5.49E-04
15GO:0015386: potassium:proton antiporter activity6.03E-04
16GO:0005388: calcium-transporting ATPase activity7.14E-04
17GO:0015079: potassium ion transmembrane transporter activity1.01E-03
18GO:0015385: sodium:proton antiporter activity1.86E-03
19GO:0015297: antiporter activity8.00E-03
20GO:0042626: ATPase activity, coupled to transmembrane movement of substances9.77E-03
21GO:0008233: peptidase activity1.29E-02
22GO:0004722: protein serine/threonine phosphatase activity1.58E-02
23GO:0000166: nucleotide binding2.59E-02
24GO:0005215: transporter activity4.60E-02
RankGO TermAdjusted P value
1GO:0000445: THO complex part of transcription export complex1.30E-04
2GO:0005847: mRNA cleavage and polyadenylation specificity factor complex1.68E-04
3GO:0000228: nuclear chromosome1.68E-04
4GO:0031307: integral component of mitochondrial outer membrane6.58E-04
5GO:0031966: mitochondrial membrane4.23E-03
6GO:0010008: endosome membrane5.09E-03
7GO:0005789: endoplasmic reticulum membrane8.67E-03
8GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.20E-02
9GO:0031969: chloroplast membrane1.31E-02
10GO:0005887: integral component of plasma membrane2.14E-02
11GO:0009941: chloroplast envelope2.68E-02
12GO:0005634: nucleus3.47E-02
13GO:0005802: trans-Golgi network3.63E-02
14GO:0005783: endoplasmic reticulum3.98E-02
Gene type



Gene DE type