co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G12860

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046856: phosphatidylinositol dephosphorylation	4.91E-06
2	GO:0034337: RNA folding	1.04E-05
3	GO:0009959: negative gravitropism	1.74E-04
4	GO:1901371: regulation of leaf morphogenesis	1.74E-04
5	GO:0080036: regulation of cytokinin-activated signaling pathway	2.11E-04
6	GO:1901259: chloroplast rRNA processing	2.11E-04
7	GO:0010207: photosystem II assembly	6.53E-04
8	GO:0090351: seedling development	7.02E-04
9	GO:2000377: regulation of reactive oxygen species metabolic process	8.05E-04
10	GO:0042335: cuticle development	1.19E-03
11	GO:0071472: cellular response to salt stress	1.25E-03
12	GO:0010305: leaf vascular tissue pattern formation	1.25E-03
13	GO:0000302: response to reactive oxygen species	1.44E-03
14	GO:0016032: viral process	1.50E-03
15	GO:0009639: response to red or far red light	1.63E-03
16	GO:0010027: thylakoid membrane organization	1.83E-03
17	GO:0016049: cell growth	2.11E-03
18	GO:0000160: phosphorelay signal transduction system	2.26E-03
19	GO:0006865: amino acid transport	2.48E-03
20	GO:0034599: cellular response to oxidative stress	2.64E-03
21	GO:0006855: drug transmembrane transport	3.37E-03
22	GO:0009736: cytokinin-activated signaling pathway	3.72E-03
23	GO:0009553: embryo sac development	4.63E-03
24	GO:0042744: hydrogen peroxide catabolic process	6.03E-03
25	GO:0009451: RNA modification	7.00E-03
26	GO:0007166: cell surface receptor signaling pathway	7.56E-03
27	GO:0048366: leaf development	1.05E-02
28	GO:0015979: photosynthesis	1.19E-02
29	GO:0006629: lipid metabolic process	1.43E-02
30	GO:0009908: flower development	2.00E-02
31	GO:0051301: cell division	2.29E-02

Rank	GO Term	Adjusted P value
1	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	5.46E-07
2	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	5.89E-06
3	GO:0016787: hydrolase activity	1.18E-05
4	GO:0004445: inositol-polyphosphate 5-phosphatase activity	7.70E-05
5	GO:0004130: cytochrome-c peroxidase activity	1.74E-04
6	GO:0009927: histidine phosphotransfer kinase activity	2.11E-04
7	GO:0047372: acylglycerol lipase activity	5.09E-04
8	GO:0043424: protein histidine kinase binding	8.59E-04
9	GO:0003746: translation elongation factor activity	2.56E-03
10	GO:0015171: amino acid transmembrane transporter activity	3.98E-03
11	GO:0019843: rRNA binding	5.52E-03
12	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	6.56E-03
13	GO:0003743: translation initiation factor activity	7.68E-03
14	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	8.14E-03
15	GO:0004601: peroxidase activity	9.34E-03
16	GO:0004519: endonuclease activity	1.52E-02
17	GO:0005516: calmodulin binding	2.88E-02
18	GO:0005525: GTP binding	3.07E-02
19	GO:0005509: calcium ion binding	3.36E-02
20	GO:0003723: RNA binding	3.42E-02
21	GO:0003729: mRNA binding	4.73E-02
22	GO:0020037: heme binding	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0009534: chloroplast thylakoid	9.44E-09
2	GO:0031977: thylakoid lumen	2.01E-06
3	GO:0009543: chloroplast thylakoid lumen	1.05E-05
4	GO:0042646: plastid nucleoid	7.70E-05
5	GO:0009535: chloroplast thylakoid membrane	1.76E-04
6	GO:0016363: nuclear matrix	2.11E-04
7	GO:0009579: thylakoid	2.60E-04
8	GO:0032040: small-subunit processome	5.55E-04
9	GO:0009654: photosystem II oxygen evolving complex	8.59E-04
10	GO:0019898: extrinsic component of membrane	1.37E-03
11	GO:0009507: chloroplast	2.65E-03
12	GO:0009570: chloroplast stroma	5.38E-03
13	GO:0043231: intracellular membrane-bounded organelle	1.53E-02
14	GO:0005840: ribosome	3.68E-02
15	GO:0005886: plasma membrane	4.02E-02