GO Enrichment Analysis of Co-expressed Genes with
AT1G12845
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1904526: regulation of microtubule binding | 0.00E+00 |
| 2 | GO:0006782: protoporphyrinogen IX biosynthetic process | 5.23E-07 |
| 3 | GO:0015995: chlorophyll biosynthetic process | 6.50E-07 |
| 4 | GO:0015979: photosynthesis | 9.08E-06 |
| 5 | GO:0006783: heme biosynthetic process | 3.71E-05 |
| 6 | GO:0010028: xanthophyll cycle | 5.64E-05 |
| 7 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 5.64E-05 |
| 8 | GO:0006824: cobalt ion transport | 5.64E-05 |
| 9 | GO:0016122: xanthophyll metabolic process | 1.37E-04 |
| 10 | GO:0034755: iron ion transmembrane transport | 1.37E-04 |
| 11 | GO:1901679: nucleotide transmembrane transport | 1.37E-04 |
| 12 | GO:0080121: AMP transport | 2.34E-04 |
| 13 | GO:0090391: granum assembly | 2.34E-04 |
| 14 | GO:0010306: rhamnogalacturonan II biosynthetic process | 3.41E-04 |
| 15 | GO:0042938: dipeptide transport | 4.56E-04 |
| 16 | GO:0009765: photosynthesis, light harvesting | 4.56E-04 |
| 17 | GO:0015994: chlorophyll metabolic process | 4.56E-04 |
| 18 | GO:0015867: ATP transport | 4.56E-04 |
| 19 | GO:0015866: ADP transport | 7.07E-04 |
| 20 | GO:0035435: phosphate ion transmembrane transport | 7.07E-04 |
| 21 | GO:0010190: cytochrome b6f complex assembly | 7.07E-04 |
| 22 | GO:0045926: negative regulation of growth | 8.44E-04 |
| 23 | GO:0009942: longitudinal axis specification | 8.44E-04 |
| 24 | GO:0098655: cation transmembrane transport | 8.44E-04 |
| 25 | GO:0009769: photosynthesis, light harvesting in photosystem II | 9.85E-04 |
| 26 | GO:0050829: defense response to Gram-negative bacterium | 9.85E-04 |
| 27 | GO:0009645: response to low light intensity stimulus | 9.85E-04 |
| 28 | GO:0010492: maintenance of shoot apical meristem identity | 1.13E-03 |
| 29 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.13E-03 |
| 30 | GO:0007389: pattern specification process | 1.29E-03 |
| 31 | GO:0098656: anion transmembrane transport | 1.45E-03 |
| 32 | GO:0048507: meristem development | 1.45E-03 |
| 33 | GO:0010206: photosystem II repair | 1.45E-03 |
| 34 | GO:0009638: phototropism | 1.62E-03 |
| 35 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.62E-03 |
| 36 | GO:0031425: chloroplast RNA processing | 1.62E-03 |
| 37 | GO:0006949: syncytium formation | 1.79E-03 |
| 38 | GO:0009773: photosynthetic electron transport in photosystem I | 1.97E-03 |
| 39 | GO:0015706: nitrate transport | 2.16E-03 |
| 40 | GO:0009785: blue light signaling pathway | 2.36E-03 |
| 41 | GO:0030048: actin filament-based movement | 2.36E-03 |
| 42 | GO:0005992: trehalose biosynthetic process | 3.18E-03 |
| 43 | GO:0051017: actin filament bundle assembly | 3.18E-03 |
| 44 | GO:0007017: microtubule-based process | 3.40E-03 |
| 45 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.40E-03 |
| 46 | GO:0009269: response to desiccation | 3.63E-03 |
| 47 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 4.10E-03 |
| 48 | GO:0048868: pollen tube development | 5.09E-03 |
| 49 | GO:0007018: microtubule-based movement | 5.35E-03 |
| 50 | GO:0010193: response to ozone | 5.88E-03 |
| 51 | GO:0000302: response to reactive oxygen species | 5.88E-03 |
| 52 | GO:0010583: response to cyclopentenone | 6.15E-03 |
| 53 | GO:0009828: plant-type cell wall loosening | 6.71E-03 |
| 54 | GO:0010252: auxin homeostasis | 6.71E-03 |
| 55 | GO:0006508: proteolysis | 7.98E-03 |
| 56 | GO:0018298: protein-chromophore linkage | 9.13E-03 |
| 57 | GO:0010218: response to far red light | 9.78E-03 |
| 58 | GO:0007568: aging | 1.01E-02 |
| 59 | GO:0009637: response to blue light | 1.08E-02 |
| 60 | GO:0034599: cellular response to oxidative stress | 1.11E-02 |
| 61 | GO:0006839: mitochondrial transport | 1.18E-02 |
| 62 | GO:0006631: fatty acid metabolic process | 1.22E-02 |
| 63 | GO:0010114: response to red light | 1.29E-02 |
| 64 | GO:0009926: auxin polar transport | 1.29E-02 |
| 65 | GO:0009644: response to high light intensity | 1.36E-02 |
| 66 | GO:0009664: plant-type cell wall organization | 1.51E-02 |
| 67 | GO:0009735: response to cytokinin | 1.63E-02 |
| 68 | GO:0010224: response to UV-B | 1.63E-02 |
| 69 | GO:0006857: oligopeptide transport | 1.67E-02 |
| 70 | GO:0009416: response to light stimulus | 1.78E-02 |
| 71 | GO:0042545: cell wall modification | 2.00E-02 |
| 72 | GO:0009742: brassinosteroid mediated signaling pathway | 2.13E-02 |
| 73 | GO:0055085: transmembrane transport | 2.26E-02 |
| 74 | GO:0042744: hydrogen peroxide catabolic process | 2.63E-02 |
| 75 | GO:0045490: pectin catabolic process | 3.02E-02 |
| 76 | GO:0009451: RNA modification | 3.07E-02 |
| 77 | GO:0006470: protein dephosphorylation | 3.32E-02 |
| 78 | GO:0009826: unidimensional cell growth | 4.01E-02 |
| 79 | GO:0009860: pollen tube growth | 4.34E-02 |
| 80 | GO:0080167: response to karrikin | 4.80E-02 |
| 81 | GO:0009409: response to cold | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 2 | GO:0004853: uroporphyrinogen decarboxylase activity | 0.00E+00 |
| 3 | GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity | 5.64E-05 |
| 4 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 5.64E-05 |
| 5 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.37E-04 |
| 6 | GO:0016851: magnesium chelatase activity | 3.41E-04 |
| 7 | GO:0042936: dipeptide transporter activity | 4.56E-04 |
| 8 | GO:0080122: AMP transmembrane transporter activity | 5.78E-04 |
| 9 | GO:0004130: cytochrome-c peroxidase activity | 7.07E-04 |
| 10 | GO:0015217: ADP transmembrane transporter activity | 8.44E-04 |
| 11 | GO:0016832: aldehyde-lyase activity | 8.44E-04 |
| 12 | GO:0005347: ATP transmembrane transporter activity | 8.44E-04 |
| 13 | GO:0003777: microtubule motor activity | 1.62E-03 |
| 14 | GO:0005381: iron ion transmembrane transporter activity | 1.62E-03 |
| 15 | GO:0009672: auxin:proton symporter activity | 1.62E-03 |
| 16 | GO:0004805: trehalose-phosphatase activity | 1.79E-03 |
| 17 | GO:0047372: acylglycerol lipase activity | 1.97E-03 |
| 18 | GO:0031072: heat shock protein binding | 2.36E-03 |
| 19 | GO:0015114: phosphate ion transmembrane transporter activity | 2.36E-03 |
| 20 | GO:0010329: auxin efflux transmembrane transporter activity | 2.36E-03 |
| 21 | GO:0003774: motor activity | 2.56E-03 |
| 22 | GO:0031409: pigment binding | 2.97E-03 |
| 23 | GO:0003756: protein disulfide isomerase activity | 4.34E-03 |
| 24 | GO:0019901: protein kinase binding | 5.61E-03 |
| 25 | GO:0051015: actin filament binding | 6.43E-03 |
| 26 | GO:0005200: structural constituent of cytoskeleton | 7.00E-03 |
| 27 | GO:0016168: chlorophyll binding | 7.89E-03 |
| 28 | GO:0005215: transporter activity | 8.47E-03 |
| 29 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 8.81E-03 |
| 30 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.01E-02 |
| 31 | GO:0004519: endonuclease activity | 1.09E-02 |
| 32 | GO:0008289: lipid binding | 1.40E-02 |
| 33 | GO:0045330: aspartyl esterase activity | 1.71E-02 |
| 34 | GO:0016874: ligase activity | 1.96E-02 |
| 35 | GO:0030599: pectinesterase activity | 1.96E-02 |
| 36 | GO:0051082: unfolded protein binding | 2.04E-02 |
| 37 | GO:0004252: serine-type endopeptidase activity | 2.58E-02 |
| 38 | GO:0046910: pectinesterase inhibitor activity | 2.87E-02 |
| 39 | GO:0008017: microtubule binding | 3.12E-02 |
| 40 | GO:0004601: peroxidase activity | 4.12E-02 |
| 41 | GO:0016788: hydrolase activity, acting on ester bonds | 4.17E-02 |
| 42 | GO:0050660: flavin adenine dinucleotide binding | 4.57E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0009534: chloroplast thylakoid | 3.52E-14 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.81E-13 |
| 4 | GO:0009507: chloroplast | 5.06E-11 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 5.18E-07 |
| 6 | GO:0009522: photosystem I | 1.00E-05 |
| 7 | GO:0031977: thylakoid lumen | 6.78E-05 |
| 8 | GO:0009579: thylakoid | 9.27E-05 |
| 9 | GO:0030095: chloroplast photosystem II | 1.02E-04 |
| 10 | GO:0030093: chloroplast photosystem I | 1.37E-04 |
| 11 | GO:0010007: magnesium chelatase complex | 2.34E-04 |
| 12 | GO:0010287: plastoglobule | 2.48E-04 |
| 13 | GO:0042646: plastid nucleoid | 3.41E-04 |
| 14 | GO:0009517: PSII associated light-harvesting complex II | 4.56E-04 |
| 15 | GO:0009570: chloroplast stroma | 5.65E-04 |
| 16 | GO:0016363: nuclear matrix | 8.44E-04 |
| 17 | GO:0009538: photosystem I reaction center | 1.13E-03 |
| 18 | GO:0045298: tubulin complex | 1.45E-03 |
| 19 | GO:0016459: myosin complex | 1.79E-03 |
| 20 | GO:0030076: light-harvesting complex | 2.76E-03 |
| 21 | GO:0015629: actin cytoskeleton | 4.10E-03 |
| 22 | GO:0009941: chloroplast envelope | 4.12E-03 |
| 23 | GO:0005871: kinesin complex | 4.58E-03 |
| 24 | GO:0009523: photosystem II | 5.61E-03 |
| 25 | GO:0071944: cell periphery | 6.43E-03 |
| 26 | GO:0005874: microtubule | 6.55E-03 |
| 27 | GO:0005618: cell wall | 1.17E-02 |
| 28 | GO:0005856: cytoskeleton | 1.40E-02 |
| 29 | GO:0009706: chloroplast inner membrane | 2.04E-02 |
| 30 | GO:0009505: plant-type cell wall | 4.51E-02 |
| 31 | GO:0016020: membrane | 4.88E-02 |