Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G12000

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010157: response to chlorate0.00E+00
2GO:0016048: detection of temperature stimulus0.00E+00
3GO:0080094: response to trehalose-6-phosphate0.00E+00
4GO:0006342: chromatin silencing4.49E-07
5GO:0006458: 'de novo' protein folding1.43E-06
6GO:0042026: protein refolding1.43E-06
7GO:0044030: regulation of DNA methylation3.56E-06
8GO:0006169: adenosine salvage1.48E-05
9GO:0061077: chaperone-mediated protein folding2.67E-05
10GO:0007005: mitochondrion organization2.99E-05
11GO:0045717: negative regulation of fatty acid biosynthetic process3.88E-05
12GO:0009662: etioplast organization3.88E-05
13GO:0071158: positive regulation of cell cycle arrest3.88E-05
14GO:0010468: regulation of gene expression4.73E-05
15GO:0042780: tRNA 3'-end processing6.95E-05
16GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic6.95E-05
17GO:0035066: positive regulation of histone acetylation6.95E-05
18GO:0070828: heterochromatin organization6.95E-05
19GO:0035067: negative regulation of histone acetylation1.05E-04
20GO:0044209: AMP salvage1.88E-04
21GO:0042793: transcription from plastid promoter2.34E-04
22GO:0070814: hydrogen sulfide biosynthetic process2.34E-04
23GO:0009704: de-etiolation3.84E-04
24GO:0052543: callose deposition in cell wall3.84E-04
25GO:0009642: response to light intensity3.84E-04
26GO:0000103: sulfate assimilation6.08E-04
27GO:0009970: cellular response to sulfate starvation6.08E-04
28GO:0045037: protein import into chloroplast stroma7.29E-04
29GO:0009934: regulation of meristem structural organization8.55E-04
30GO:0009658: chloroplast organization1.05E-03
31GO:0042127: regulation of cell proliferation1.41E-03
32GO:0008033: tRNA processing1.57E-03
33GO:0010501: RNA secondary structure unwinding1.57E-03
34GO:0016032: viral process1.98E-03
35GO:0006950: response to stress2.70E-03
36GO:0006457: protein folding4.27E-03
37GO:0009909: regulation of flower development5.31E-03
38GO:0009058: biosynthetic process7.65E-03
39GO:0009790: embryo development8.21E-03
40GO:0045944: positive regulation of transcription from RNA polymerase II promoter1.19E-02
41GO:0006970: response to osmotic stress1.32E-02
42GO:0048366: leaf development1.41E-02
43GO:0045892: negative regulation of transcription, DNA-templated1.68E-02
44GO:0009408: response to heat1.93E-02
45GO:0006281: DNA repair1.93E-02
46GO:0009908: flower development2.70E-02
47GO:0006414: translational elongation3.86E-02
48GO:0009414: response to water deprivation4.71E-02
49GO:0042742: defense response to bacterium4.79E-02
RankGO TermAdjusted P value
1GO:0003677: DNA binding1.96E-07
2GO:0046982: protein heterodimerization activity2.02E-06
3GO:0044183: protein binding involved in protein folding8.48E-06
4GO:0004001: adenosine kinase activity1.48E-05
5GO:0051082: unfolded protein binding1.49E-05
6GO:0004781: sulfate adenylyltransferase (ATP) activity6.95E-05
7GO:0042781: 3'-tRNA processing endoribonuclease activity6.95E-05
8GO:0001872: (1->3)-beta-D-glucan binding1.05E-04
9GO:0003713: transcription coactivator activity1.65E-03
10GO:0008483: transaminase activity2.24E-03
11GO:0004004: ATP-dependent RNA helicase activity2.70E-03
12GO:0030247: polysaccharide binding2.70E-03
13GO:0005524: ATP binding2.94E-03
14GO:0008026: ATP-dependent helicase activity6.57E-03
15GO:0030170: pyridoxal phosphate binding7.93E-03
16GO:0003682: chromatin binding1.31E-02
17GO:0042803: protein homodimerization activity1.72E-02
18GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.54E-02
19GO:0005507: copper ion binding3.73E-02
RankGO TermAdjusted P value
1GO:0005721: pericentric heterochromatin0.00E+00
2GO:0000786: nucleosome2.65E-08
3GO:0000790: nuclear chromatin3.39E-07
4GO:0042644: chloroplast nucleoid4.55E-06
5GO:0031436: BRCA1-BARD1 complex1.48E-05
6GO:0000792: heterochromatin3.88E-05
7GO:0000427: plastid-encoded plastid RNA polymerase complex3.88E-05
8GO:0070531: BRCA1-A complex6.95E-05
9GO:0042646: plastid nucleoid1.05E-04
10GO:0022626: cytosolic ribosome3.43E-04
11GO:0009941: chloroplast envelope1.12E-03
12GO:0005730: nucleolus1.68E-03
13GO:0009570: chloroplast stroma1.84E-03
14GO:0009295: nucleoid2.24E-03
15GO:0005634: nucleus2.46E-03
16GO:0009579: thylakoid3.95E-03
17GO:0009536: plastid8.17E-03
18GO:0046658: anchored component of plasma membrane1.12E-02
19GO:0009506: plasmodesma2.27E-02
20GO:0009507: chloroplast2.41E-02
21GO:0048046: apoplast2.44E-02
22GO:0031225: anchored component of membrane3.98E-02
23GO:0005622: intracellular4.37E-02
24GO:0005840: ribosome4.96E-02
Gene type



Gene DE type