co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G11380

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080127: fruit septum development	0.00E+00
2	GO:0006792: regulation of sulfur utilization	0.00E+00
3	GO:0010200: response to chitin	2.89E-06
4	GO:0010411: xyloglucan metabolic process	2.03E-05
5	GO:0042546: cell wall biogenesis	7.03E-05
6	GO:0009751: response to salicylic acid	7.98E-05
7	GO:0030154: cell differentiation	8.62E-05
8	GO:0000271: polysaccharide biosynthetic process	9.90E-05
9	GO:0045489: pectin biosynthetic process	1.11E-04
10	GO:0010583: response to cyclopentenone	1.65E-04
11	GO:0009962: regulation of flavonoid biosynthetic process	1.84E-04
12	GO:2000029: regulation of proanthocyanidin biosynthetic process	1.84E-04
13	GO:0050691: regulation of defense response to virus by host	1.84E-04
14	GO:0033481: galacturonate biosynthetic process	1.84E-04
15	GO:0031542: positive regulation of anthocyanin biosynthetic process	4.15E-04
16	GO:0071497: cellular response to freezing	4.15E-04
17	GO:0009733: response to auxin	4.29E-04
18	GO:0040008: regulation of growth	4.68E-04
19	GO:0009718: anthocyanin-containing compound biosynthetic process	4.70E-04
20	GO:0048467: gynoecium development	5.30E-04
21	GO:0010581: regulation of starch biosynthetic process	6.76E-04
22	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	6.76E-04
23	GO:0006357: regulation of transcription from RNA polymerase II promoter	8.26E-04
24	GO:0031347: regulation of defense response	8.57E-04
25	GO:0009826: unidimensional cell growth	9.20E-04
26	GO:2000022: regulation of jasmonic acid mediated signaling pathway	9.58E-04
27	GO:1902358: sulfate transmembrane transport	9.65E-04
28	GO:0040007: growth	1.04E-03
29	GO:0006355: regulation of transcription, DNA-templated	1.04E-03
30	GO:0071555: cell wall organization	1.27E-03
31	GO:0046345: abscisic acid catabolic process	1.28E-03
32	GO:0009741: response to brassinosteroid	1.41E-03
33	GO:0016131: brassinosteroid metabolic process	1.63E-03
34	GO:2000762: regulation of phenylpropanoid metabolic process	1.63E-03
35	GO:0010438: cellular response to sulfur starvation	1.63E-03
36	GO:0006468: protein phosphorylation	1.67E-03
37	GO:0060918: auxin transport	2.01E-03
38	GO:1902456: regulation of stomatal opening	2.01E-03
39	GO:0047484: regulation of response to osmotic stress	2.01E-03
40	GO:0003006: developmental process involved in reproduction	2.01E-03
41	GO:0009828: plant-type cell wall loosening	2.10E-03
42	GO:0010555: response to mannitol	2.41E-03
43	GO:2000067: regulation of root morphogenesis	2.41E-03
44	GO:1901001: negative regulation of response to salt stress	2.41E-03
45	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.64E-03
46	GO:0009753: response to jasmonic acid	2.70E-03
47	GO:0050829: defense response to Gram-negative bacterium	2.83E-03
48	GO:0051510: regulation of unidimensional cell growth	2.83E-03
49	GO:0030162: regulation of proteolysis	3.28E-03
50	GO:0010439: regulation of glucosinolate biosynthetic process	3.28E-03
51	GO:0009813: flavonoid biosynthetic process	3.42E-03
52	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.75E-03
53	GO:0010099: regulation of photomorphogenesis	3.75E-03
54	GO:0007186: G-protein coupled receptor signaling pathway	3.75E-03
55	GO:0010119: regulation of stomatal movement	3.76E-03
56	GO:0016051: carbohydrate biosynthetic process	4.12E-03
57	GO:0019432: triglyceride biosynthetic process	4.25E-03
58	GO:0048507: meristem development	4.25E-03
59	GO:0051865: protein autoubiquitination	4.25E-03
60	GO:0000902: cell morphogenesis	4.25E-03
61	GO:0009638: phototropism	4.76E-03
62	GO:0043069: negative regulation of programmed cell death	5.30E-03
63	GO:0009738: abscisic acid-activated signaling pathway	5.52E-03
64	GO:0009860: pollen tube growth	5.79E-03
65	GO:1903507: negative regulation of nucleic acid-templated transcription	5.85E-03
66	GO:0009750: response to fructose	5.85E-03
67	GO:0000038: very long-chain fatty acid metabolic process	5.85E-03
68	GO:2000652: regulation of secondary cell wall biogenesis	5.85E-03
69	GO:0009723: response to ethylene	6.34E-03
70	GO:0016024: CDP-diacylglycerol biosynthetic process	6.43E-03
71	GO:0010582: floral meristem determinacy	6.43E-03
72	GO:0016925: protein sumoylation	6.43E-03
73	GO:0030036: actin cytoskeleton organization	7.03E-03
74	GO:0018107: peptidyl-threonine phosphorylation	7.03E-03
75	GO:0009585: red, far-red light phototransduction	7.14E-03
76	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	7.23E-03
77	GO:0002237: response to molecule of bacterial origin	7.64E-03
78	GO:0010540: basipetal auxin transport	7.64E-03
79	GO:0034605: cellular response to heat	7.64E-03
80	GO:0010143: cutin biosynthetic process	7.64E-03
81	GO:0005985: sucrose metabolic process	8.27E-03
82	GO:0009969: xyloglucan biosynthetic process	8.27E-03
83	GO:0009225: nucleotide-sugar metabolic process	8.27E-03
84	GO:0006636: unsaturated fatty acid biosynthetic process	8.93E-03
85	GO:2000377: regulation of reactive oxygen species metabolic process	9.60E-03
86	GO:0005992: trehalose biosynthetic process	9.60E-03
87	GO:0006487: protein N-linked glycosylation	9.60E-03
88	GO:0019953: sexual reproduction	1.03E-02
89	GO:0010026: trichome differentiation	1.03E-02
90	GO:0016998: cell wall macromolecule catabolic process	1.10E-02
91	GO:0010017: red or far-red light signaling pathway	1.17E-02
92	GO:0009411: response to UV	1.25E-02
93	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.25E-02
94	GO:0006351: transcription, DNA-templated	1.27E-02
95	GO:0019722: calcium-mediated signaling	1.32E-02
96	GO:0010214: seed coat development	1.32E-02
97	GO:0010118: stomatal movement	1.48E-02
98	GO:0048653: anther development	1.48E-02
99	GO:0000226: microtubule cytoskeleton organization	1.48E-02
100	GO:0009958: positive gravitropism	1.56E-02
101	GO:0010268: brassinosteroid homeostasis	1.56E-02
102	GO:0009749: response to glucose	1.73E-02
103	GO:0009791: post-embryonic development	1.73E-02
104	GO:0009737: response to abscisic acid	1.75E-02
105	GO:0009734: auxin-activated signaling pathway	1.76E-02
106	GO:0002229: defense response to oomycetes	1.81E-02
107	GO:0016132: brassinosteroid biosynthetic process	1.81E-02
108	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.81E-02
109	GO:0007264: small GTPase mediated signal transduction	1.90E-02
110	GO:0009739: response to gibberellin	1.98E-02
111	GO:0009639: response to red or far red light	2.07E-02
112	GO:0016125: sterol metabolic process	2.07E-02
113	GO:0019760: glucosinolate metabolic process	2.07E-02
114	GO:0007267: cell-cell signaling	2.17E-02
115	GO:0001666: response to hypoxia	2.35E-02
116	GO:0009416: response to light stimulus	2.35E-02
117	GO:0035556: intracellular signal transduction	2.51E-02
118	GO:0048573: photoperiodism, flowering	2.64E-02
119	GO:0016311: dephosphorylation	2.74E-02
120	GO:0048481: plant ovule development	2.84E-02
121	GO:0048767: root hair elongation	2.94E-02
122	GO:0010218: response to far red light	3.05E-02
123	GO:0048527: lateral root development	3.15E-02
124	GO:0007568: aging	3.15E-02
125	GO:0048366: leaf development	3.22E-02
126	GO:0009867: jasmonic acid mediated signaling pathway	3.36E-02
127	GO:0009637: response to blue light	3.36E-02
128	GO:0046777: protein autophosphorylation	3.62E-02
129	GO:0044550: secondary metabolite biosynthetic process	3.68E-02
130	GO:0042542: response to hydrogen peroxide	3.92E-02
131	GO:0010114: response to red light	4.03E-02
132	GO:0009744: response to sucrose	4.03E-02
133	GO:0045454: cell redox homeostasis	4.05E-02
134	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.61E-02
135	GO:0009664: plant-type cell wall organization	4.73E-02
136	GO:0006629: lipid metabolic process	4.97E-02
137	GO:0009809: lignin biosynthetic process	4.98E-02
138	GO:0006486: protein glycosylation	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0045552: dihydrokaempferol 4-reductase activity	0.00E+00
2	GO:0090411: brassinosteroid binding	0.00E+00
3	GO:0047890: flavanone 4-reductase activity	0.00E+00
4	GO:0016711: flavonoid 3'-monooxygenase activity	0.00E+00
5	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.51E-04
6	GO:0080132: fatty acid alpha-hydroxylase activity	1.84E-04
7	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.14E-04
8	GO:0044212: transcription regulatory region DNA binding	3.28E-04
9	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	3.42E-04
10	GO:0050736: O-malonyltransferase activity	4.15E-04
11	GO:0048531: beta-1,3-galactosyltransferase activity	4.15E-04
12	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	4.18E-04
13	GO:0004674: protein serine/threonine kinase activity	4.76E-04
14	GO:0003700: transcription factor activity, sequence-specific DNA binding	6.67E-04
15	GO:0031683: G-protein beta/gamma-subunit complex binding	6.76E-04
16	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	6.76E-04
17	GO:0001664: G-protein coupled receptor binding	6.76E-04
18	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	9.58E-04
19	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	9.65E-04
20	GO:0033843: xyloglucan 6-xylosyltransferase activity	9.65E-04
21	GO:0050378: UDP-glucuronate 4-epimerase activity	1.28E-03
22	GO:0043565: sequence-specific DNA binding	1.53E-03
23	GO:0031386: protein tag	1.63E-03
24	GO:0016758: transferase activity, transferring hexosyl groups	1.95E-03
25	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.01E-03
26	GO:0035252: UDP-xylosyltransferase activity	2.01E-03
27	GO:0010427: abscisic acid binding	2.01E-03
28	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.01E-03
29	GO:0004672: protein kinase activity	2.73E-03
30	GO:0016621: cinnamoyl-CoA reductase activity	2.83E-03
31	GO:0008271: secondary active sulfate transmembrane transporter activity	3.75E-03
32	GO:0005506: iron ion binding	4.60E-03
33	GO:0016757: transferase activity, transferring glycosyl groups	4.87E-03
34	GO:0004805: trehalose-phosphatase activity	5.30E-03
35	GO:0004864: protein phosphatase inhibitor activity	5.30E-03
36	GO:0000976: transcription regulatory region sequence-specific DNA binding	6.43E-03
37	GO:0015116: sulfate transmembrane transporter activity	6.43E-03
38	GO:0046983: protein dimerization activity	7.84E-03
39	GO:0003712: transcription cofactor activity	8.27E-03
40	GO:0003714: transcription corepressor activity	9.60E-03
41	GO:0019825: oxygen binding	9.92E-03
42	GO:0020037: heme binding	1.05E-02
43	GO:0016301: kinase activity	1.35E-02
44	GO:0004402: histone acetyltransferase activity	1.48E-02
45	GO:0001085: RNA polymerase II transcription factor binding	1.56E-02
46	GO:0050662: coenzyme binding	1.64E-02
47	GO:0004872: receptor activity	1.73E-02
48	GO:0016791: phosphatase activity	2.07E-02
49	GO:0016759: cellulose synthase activity	2.07E-02
50	GO:0005200: structural constituent of cytoskeleton	2.17E-02
51	GO:0005515: protein binding	2.19E-02
52	GO:0008375: acetylglucosaminyltransferase activity	2.55E-02
53	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.55E-02
54	GO:0004806: triglyceride lipase activity	2.64E-02
55	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.15E-02
56	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.32E-02
57	GO:0003677: DNA binding	3.58E-02
58	GO:0005516: calmodulin binding	3.90E-02
59	GO:0004185: serine-type carboxypeptidase activity	4.03E-02
60	GO:0004871: signal transducer activity	4.24E-02
61	GO:0043621: protein self-association	4.26E-02
62	GO:0015293: symporter activity	4.38E-02
63	GO:0003924: GTPase activity	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0090568: nuclear transcriptional repressor complex	0.00E+00
2	GO:0009505: plant-type cell wall	1.30E-04
3	GO:0005794: Golgi apparatus	5.45E-04
4	GO:0042406: extrinsic component of endoplasmic reticulum membrane	6.76E-04
5	GO:0031225: anchored component of membrane	3.00E-03
6	GO:0005615: extracellular space	3.49E-03
7	GO:0046658: anchored component of plasma membrane	4.32E-03
8	GO:0048046: apoplast	5.63E-03
9	GO:0000139: Golgi membrane	8.03E-03
10	GO:0032580: Golgi cisterna membrane	2.07E-02
11	GO:0005667: transcription factor complex	2.55E-02
12	GO:0019005: SCF ubiquitin ligase complex	2.84E-02
13	GO:0005576: extracellular region	3.49E-02
14	GO:0009506: plasmodesma	3.73E-02
15	GO:0016021: integral component of membrane	3.96E-02
16	GO:0005634: nucleus	4.24E-02
17	GO:0005856: cytoskeleton	4.38E-02
18	GO:0005618: cell wall	4.91E-02