co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G11210

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010730: negative regulation of hydrogen peroxide biosynthetic process	0.00E+00
2	GO:0005997: xylulose metabolic process	0.00E+00
3	GO:0010219: regulation of vernalization response	0.00E+00
4	GO:0012502: induction of programmed cell death	0.00E+00
5	GO:0010378: temperature compensation of the circadian clock	0.00E+00
6	GO:0000390: spliceosomal complex disassembly	0.00E+00
7	GO:0007623: circadian rhythm	2.48E-08
8	GO:0009409: response to cold	2.12E-07
9	GO:0009415: response to water	7.15E-07
10	GO:0009737: response to abscisic acid	1.65E-06
11	GO:0042542: response to hydrogen peroxide	1.64E-05
12	GO:0009414: response to water deprivation	5.30E-05
13	GO:0098869: cellular oxidant detoxification	5.34E-05
14	GO:0032958: inositol phosphate biosynthetic process	1.14E-04
15	GO:0006369: termination of RNA polymerase II transcription	1.14E-04
16	GO:0009609: response to symbiotic bacterium	1.14E-04
17	GO:0009817: defense response to fungus, incompatible interaction	1.46E-04
18	GO:0009631: cold acclimation	1.79E-04
19	GO:0048833: specification of floral organ number	2.65E-04
20	GO:0051170: nuclear import	2.65E-04
21	GO:0042256: mature ribosome assembly	4.38E-04
22	GO:0006598: polyamine catabolic process	4.38E-04
23	GO:0006278: RNA-dependent DNA biosynthetic process	4.38E-04
24	GO:0042344: indole glucosinolate catabolic process	4.38E-04
25	GO:0009269: response to desiccation	4.64E-04
26	GO:1901332: negative regulation of lateral root development	6.29E-04
27	GO:0006020: inositol metabolic process	6.29E-04
28	GO:0010601: positive regulation of auxin biosynthetic process	6.29E-04
29	GO:0015749: monosaccharide transport	6.29E-04
30	GO:0042752: regulation of circadian rhythm	8.05E-04
31	GO:0006646: phosphatidylethanolamine biosynthetic process	8.35E-04
32	GO:0015743: malate transport	8.35E-04
33	GO:0048442: sepal development	8.35E-04
34	GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain	8.35E-04
35	GO:0010508: positive regulation of autophagy	8.35E-04
36	GO:0097428: protein maturation by iron-sulfur cluster transfer	1.05E-03
37	GO:0048578: positive regulation of long-day photoperiodism, flowering	1.05E-03
38	GO:0043097: pyrimidine nucleoside salvage	1.05E-03
39	GO:0009651: response to salt stress	1.07E-03
40	GO:0010286: heat acclimation	1.17E-03
41	GO:0006206: pyrimidine nucleobase metabolic process	1.29E-03
42	GO:0000741: karyogamy	1.29E-03
43	GO:0045040: protein import into mitochondrial outer membrane	1.29E-03
44	GO:0010029: regulation of seed germination	1.38E-03
45	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.54E-03
46	GO:0010555: response to mannitol	1.54E-03
47	GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity	1.54E-03
48	GO:0045926: negative regulation of growth	1.54E-03
49	GO:0018298: protein-chromophore linkage	1.69E-03
50	GO:0000160: phosphorelay signal transduction system	1.77E-03
51	GO:1900057: positive regulation of leaf senescence	1.81E-03
52	GO:1902074: response to salt	1.81E-03
53	GO:0045995: regulation of embryonic development	1.81E-03
54	GO:0048437: floral organ development	1.81E-03
55	GO:0009769: photosynthesis, light harvesting in photosystem II	1.81E-03
56	GO:0010218: response to far red light	1.86E-03
57	GO:0009819: drought recovery	2.09E-03
58	GO:0009637: response to blue light	2.13E-03
59	GO:0001510: RNA methylation	2.39E-03
60	GO:0046916: cellular transition metal ion homeostasis	2.70E-03
61	GO:0019432: triglyceride biosynthetic process	2.70E-03
62	GO:0009644: response to high light intensity	2.96E-03
63	GO:0005982: starch metabolic process	3.02E-03
64	GO:2000280: regulation of root development	3.02E-03
65	GO:0009970: cellular response to sulfate starvation	3.36E-03
66	GO:0006995: cellular response to nitrogen starvation	3.36E-03
67	GO:0048441: petal development	3.36E-03
68	GO:0055062: phosphate ion homeostasis	3.36E-03
69	GO:0009682: induced systemic resistance	3.71E-03
70	GO:0052544: defense response by callose deposition in cell wall	3.71E-03
71	GO:0045892: negative regulation of transcription, DNA-templated	3.80E-03
72	GO:0016925: protein sumoylation	4.06E-03
73	GO:0006626: protein targeting to mitochondrion	4.43E-03
74	GO:0006355: regulation of transcription, DNA-templated	4.65E-03
75	GO:0009266: response to temperature stimulus	4.81E-03
76	GO:0048440: carpel development	4.81E-03
77	GO:0007034: vacuolar transport	4.81E-03
78	GO:0010030: positive regulation of seed germination	5.21E-03
79	GO:0007165: signal transduction	5.24E-03
80	GO:0006071: glycerol metabolic process	5.61E-03
81	GO:0009768: photosynthesis, light harvesting in photosystem I	6.45E-03
82	GO:0016575: histone deacetylation	6.45E-03
83	GO:0048511: rhythmic process	6.89E-03
84	GO:0010017: red or far-red light signaling pathway	7.34E-03
85	GO:0071215: cellular response to abscisic acid stimulus	7.79E-03
86	GO:0048443: stamen development	8.26E-03
87	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	8.74E-03
88	GO:0008284: positive regulation of cell proliferation	8.74E-03
89	GO:0042631: cellular response to water deprivation	9.23E-03
90	GO:0000226: microtubule cytoskeleton organization	9.23E-03
91	GO:0042391: regulation of membrane potential	9.23E-03
92	GO:0009738: abscisic acid-activated signaling pathway	9.64E-03
93	GO:0010197: polar nucleus fusion	9.73E-03
94	GO:0046323: glucose import	9.73E-03
95	GO:0009749: response to glucose	1.08E-02
96	GO:0009617: response to bacterium	1.08E-02
97	GO:0008654: phospholipid biosynthetic process	1.08E-02
98	GO:0009556: microsporogenesis	1.08E-02
99	GO:0010468: regulation of gene expression	1.08E-02
100	GO:0035556: intracellular signal transduction	1.08E-02
101	GO:0000302: response to reactive oxygen species	1.13E-02
102	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.13E-02
103	GO:0045893: positive regulation of transcription, DNA-templated	1.20E-02
104	GO:0006914: autophagy	1.29E-02
105	GO:0019760: glucosinolate metabolic process	1.29E-02
106	GO:0009911: positive regulation of flower development	1.46E-02
107	GO:0006511: ubiquitin-dependent protein catabolic process	1.48E-02
108	GO:0006970: response to osmotic stress	1.51E-02
109	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.52E-02
110	GO:0007049: cell cycle	1.56E-02
111	GO:0048573: photoperiodism, flowering	1.64E-02
112	GO:0006950: response to stress	1.64E-02
113	GO:0006811: ion transport	1.89E-02
114	GO:0007568: aging	1.96E-02
115	GO:0016051: carbohydrate biosynthetic process	2.09E-02
116	GO:0030001: metal ion transport	2.29E-02
117	GO:0010114: response to red light	2.50E-02
118	GO:0009640: photomorphogenesis	2.50E-02
119	GO:0009408: response to heat	2.56E-02
120	GO:0008643: carbohydrate transport	2.65E-02
121	GO:0000165: MAPK cascade	2.87E-02
122	GO:0006812: cation transport	2.94E-02
123	GO:0042538: hyperosmotic salinity response	2.94E-02
124	GO:0009585: red, far-red light phototransduction	3.09E-02
125	GO:0051603: proteolysis involved in cellular protein catabolic process	3.17E-02
126	GO:0009553: embryo sac development	3.89E-02
127	GO:0006396: RNA processing	4.06E-02
128	GO:0009908: flower development	4.10E-02
129	GO:0005975: carbohydrate metabolic process	4.11E-02
130	GO:0051726: regulation of cell cycle	4.14E-02
131	GO:0046686: response to cadmium ion	4.25E-02
132	GO:0000398: mRNA splicing, via spliceosome	4.40E-02
133	GO:0009416: response to light stimulus	4.53E-02
134	GO:0009611: response to wounding	4.63E-02
135	GO:0009058: biosynthetic process	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
2	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
3	GO:1990446: U1 snRNP binding	0.00E+00
4	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	1.14E-04
5	GO:0009679: hexose:proton symporter activity	1.14E-04
6	GO:0000829: inositol heptakisphosphate kinase activity	1.14E-04
7	GO:0046870: cadmium ion binding	1.14E-04
8	GO:0000828: inositol hexakisphosphate kinase activity	1.14E-04
9	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	1.14E-04
10	GO:0004856: xylulokinase activity	1.14E-04
11	GO:0001047: core promoter binding	2.65E-04
12	GO:0032791: lead ion binding	2.65E-04
13	GO:0004609: phosphatidylserine decarboxylase activity	2.65E-04
14	GO:0047216: inositol 3-alpha-galactosyltransferase activity	2.65E-04
15	GO:0004839: ubiquitin activating enzyme activity	2.65E-04
16	GO:0004096: catalase activity	4.38E-04
17	GO:0046592: polyamine oxidase activity	4.38E-04
18	GO:0019948: SUMO activating enzyme activity	4.38E-04
19	GO:0017150: tRNA dihydrouridine synthase activity	4.38E-04
20	GO:0005253: anion channel activity	8.35E-04
21	GO:0000156: phosphorelay response regulator activity	1.04E-03
22	GO:0015145: monosaccharide transmembrane transporter activity	1.05E-03
23	GO:0008641: small protein activating enzyme activity	1.05E-03
24	GO:0016773: phosphotransferase activity, alcohol group as acceptor	1.05E-03
25	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	1.05E-03
26	GO:2001070: starch binding	1.29E-03
27	GO:0004629: phospholipase C activity	1.29E-03
28	GO:0015562: efflux transmembrane transporter activity	1.29E-03
29	GO:0000293: ferric-chelate reductase activity	1.29E-03
30	GO:0019137: thioglucosidase activity	1.29E-03
31	GO:0005515: protein binding	1.41E-03
32	GO:0004602: glutathione peroxidase activity	1.54E-03
33	GO:0004144: diacylglycerol O-acyltransferase activity	1.54E-03
34	GO:0004435: phosphatidylinositol phospholipase C activity	1.54E-03
35	GO:0004849: uridine kinase activity	1.54E-03
36	GO:0009881: photoreceptor activity	1.81E-03
37	GO:0015140: malate transmembrane transporter activity	1.81E-03
38	GO:0004525: ribonuclease III activity	2.09E-03
39	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	2.39E-03
40	GO:0008308: voltage-gated anion channel activity	2.39E-03
41	GO:0001104: RNA polymerase II transcription cofactor activity	2.39E-03
42	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.70E-03
43	GO:0008131: primary amine oxidase activity	4.81E-03
44	GO:0030552: cAMP binding	5.21E-03
45	GO:0030553: cGMP binding	5.21E-03
46	GO:0031409: pigment binding	5.61E-03
47	GO:0051536: iron-sulfur cluster binding	6.03E-03
48	GO:0004407: histone deacetylase activity	6.03E-03
49	GO:0051087: chaperone binding	6.45E-03
50	GO:0005216: ion channel activity	6.45E-03
51	GO:0008324: cation transmembrane transporter activity	6.45E-03
52	GO:0003964: RNA-directed DNA polymerase activity	6.89E-03
53	GO:0004707: MAP kinase activity	6.89E-03
54	GO:0005351: sugar:proton symporter activity	8.80E-03
55	GO:0005249: voltage-gated potassium channel activity	9.23E-03
56	GO:0030551: cyclic nucleotide binding	9.23E-03
57	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	9.73E-03
58	GO:0016168: chlorophyll binding	1.52E-02
59	GO:0102483: scopolin beta-glucosidase activity	1.64E-02
60	GO:0030247: polysaccharide binding	1.64E-02
61	GO:0003677: DNA binding	1.72E-02
62	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.77E-02
63	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.89E-02
64	GO:0050897: cobalt ion binding	1.96E-02
65	GO:0008422: beta-glucosidase activity	2.22E-02
66	GO:0005509: calcium ion binding	2.22E-02
67	GO:0005198: structural molecule activity	2.72E-02
68	GO:0016301: kinase activity	3.34E-02
69	GO:0046872: metal ion binding	3.66E-02
70	GO:0004842: ubiquitin-protein transferase activity	3.67E-02
71	GO:0016758: transferase activity, transferring hexosyl groups	4.58E-02
72	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0071008: U2-type post-mRNA release spliceosomal complex	0.00E+00
2	GO:0031981: nuclear lumen	0.00E+00
3	GO:0043036: starch grain	2.65E-04
4	GO:0032586: protein storage vacuole membrane	8.35E-04
5	GO:0070847: core mediator complex	1.29E-03
6	GO:0000815: ESCRT III complex	1.54E-03
7	GO:0005811: lipid particle	2.39E-03
8	GO:0000326: protein storage vacuole	2.39E-03
9	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	2.39E-03
10	GO:0005742: mitochondrial outer membrane translocase complex	2.39E-03
11	GO:0005777: peroxisome	2.58E-03
12	GO:0031307: integral component of mitochondrial outer membrane	4.06E-03
13	GO:0005886: plasma membrane	4.51E-03
14	GO:0030076: light-harvesting complex	5.21E-03
15	GO:0042651: thylakoid membrane	6.45E-03
16	GO:0005741: mitochondrial outer membrane	6.89E-03
17	GO:0005744: mitochondrial inner membrane presequence translocase complex	8.26E-03
18	GO:0009522: photosystem I	1.02E-02
19	GO:0009523: photosystem II	1.08E-02
20	GO:0031965: nuclear membrane	1.08E-02
21	GO:0016592: mediator complex	1.18E-02
22	GO:0005667: transcription factor complex	1.58E-02
23	GO:0000786: nucleosome	2.02E-02
24	GO:0005622: intracellular	2.08E-02
25	GO:0009941: chloroplast envelope	2.14E-02
26	GO:0031966: mitochondrial membrane	2.94E-02
27	GO:0005634: nucleus	3.68E-02
28	GO:0010287: plastoglobule	4.49E-02
29	GO:0016021: integral component of membrane	4.54E-02
30	GO:0005654: nucleoplasm	4.58E-02
31	GO:0005623: cell	4.75E-02