GO Enrichment Analysis of Co-expressed Genes with
AT1G10990
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043269: regulation of ion transport | 0.00E+00 |
| 2 | GO:0000162: tryptophan biosynthetic process | 1.35E-06 |
| 3 | GO:0071456: cellular response to hypoxia | 2.74E-06 |
| 4 | GO:0009851: auxin biosynthetic process | 7.22E-06 |
| 5 | GO:0009623: response to parasitic fungus | 4.60E-05 |
| 6 | GO:0009682: induced systemic resistance | 4.81E-05 |
| 7 | GO:0052544: defense response by callose deposition in cell wall | 4.81E-05 |
| 8 | GO:0055114: oxidation-reduction process | 8.62E-05 |
| 9 | GO:0042343: indole glucosinolate metabolic process | 8.62E-05 |
| 10 | GO:0009727: detection of ethylene stimulus | 1.13E-04 |
| 11 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 1.13E-04 |
| 12 | GO:0060919: auxin influx | 1.13E-04 |
| 13 | GO:1902626: assembly of large subunit precursor of preribosome | 1.95E-04 |
| 14 | GO:0071398: cellular response to fatty acid | 1.95E-04 |
| 15 | GO:0042256: mature ribosome assembly | 1.95E-04 |
| 16 | GO:0019438: aromatic compound biosynthetic process | 2.85E-04 |
| 17 | GO:0002239: response to oomycetes | 2.85E-04 |
| 18 | GO:0009617: response to bacterium | 3.62E-04 |
| 19 | GO:0000460: maturation of 5.8S rRNA | 3.84E-04 |
| 20 | GO:0010107: potassium ion import | 3.84E-04 |
| 21 | GO:0010600: regulation of auxin biosynthetic process | 3.84E-04 |
| 22 | GO:0007029: endoplasmic reticulum organization | 4.88E-04 |
| 23 | GO:0009759: indole glucosinolate biosynthetic process | 5.98E-04 |
| 24 | GO:0000470: maturation of LSU-rRNA | 5.98E-04 |
| 25 | GO:0009267: cellular response to starvation | 5.98E-04 |
| 26 | GO:0010315: auxin efflux | 5.98E-04 |
| 27 | GO:0000054: ribosomal subunit export from nucleus | 7.13E-04 |
| 28 | GO:0080027: response to herbivore | 8.33E-04 |
| 29 | GO:0016559: peroxisome fission | 9.57E-04 |
| 30 | GO:0042742: defense response to bacterium | 9.77E-04 |
| 31 | GO:0009808: lignin metabolic process | 1.09E-03 |
| 32 | GO:0006813: potassium ion transport | 1.14E-03 |
| 33 | GO:0009733: response to auxin | 1.16E-03 |
| 34 | GO:0034765: regulation of ion transmembrane transport | 1.22E-03 |
| 35 | GO:0090333: regulation of stomatal closure | 1.22E-03 |
| 36 | GO:0007338: single fertilization | 1.22E-03 |
| 37 | GO:0008202: steroid metabolic process | 1.36E-03 |
| 38 | GO:0009626: plant-type hypersensitive response | 1.42E-03 |
| 39 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 1.51E-03 |
| 40 | GO:0006032: chitin catabolic process | 1.51E-03 |
| 41 | GO:0009688: abscisic acid biosynthetic process | 1.51E-03 |
| 42 | GO:0000272: polysaccharide catabolic process | 1.66E-03 |
| 43 | GO:0030148: sphingolipid biosynthetic process | 1.66E-03 |
| 44 | GO:0071365: cellular response to auxin stimulus | 1.81E-03 |
| 45 | GO:0002213: defense response to insect | 1.81E-03 |
| 46 | GO:0010540: basipetal auxin transport | 2.14E-03 |
| 47 | GO:0071732: cellular response to nitric oxide | 2.31E-03 |
| 48 | GO:0010030: positive regulation of seed germination | 2.31E-03 |
| 49 | GO:0009969: xyloglucan biosynthetic process | 2.31E-03 |
| 50 | GO:0007031: peroxisome organization | 2.31E-03 |
| 51 | GO:0080147: root hair cell development | 2.67E-03 |
| 52 | GO:0031408: oxylipin biosynthetic process | 3.04E-03 |
| 53 | GO:0016998: cell wall macromolecule catabolic process | 3.04E-03 |
| 54 | GO:0098542: defense response to other organism | 3.04E-03 |
| 55 | GO:0009814: defense response, incompatible interaction | 3.23E-03 |
| 56 | GO:0016226: iron-sulfur cluster assembly | 3.23E-03 |
| 57 | GO:0035428: hexose transmembrane transport | 3.23E-03 |
| 58 | GO:0006952: defense response | 3.43E-03 |
| 59 | GO:0071369: cellular response to ethylene stimulus | 3.43E-03 |
| 60 | GO:0009693: ethylene biosynthetic process | 3.43E-03 |
| 61 | GO:0071215: cellular response to abscisic acid stimulus | 3.43E-03 |
| 62 | GO:0042391: regulation of membrane potential | 4.04E-03 |
| 63 | GO:0006885: regulation of pH | 4.25E-03 |
| 64 | GO:0046323: glucose import | 4.25E-03 |
| 65 | GO:0009723: response to ethylene | 4.86E-03 |
| 66 | GO:0002229: defense response to oomycetes | 4.91E-03 |
| 67 | GO:0010583: response to cyclopentenone | 5.13E-03 |
| 68 | GO:0009630: gravitropism | 5.13E-03 |
| 69 | GO:0071281: cellular response to iron ion | 5.37E-03 |
| 70 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 5.39E-03 |
| 71 | GO:0009567: double fertilization forming a zygote and endosperm | 5.60E-03 |
| 72 | GO:0019760: glucosinolate metabolic process | 5.60E-03 |
| 73 | GO:0010252: auxin homeostasis | 5.60E-03 |
| 74 | GO:0044550: secondary metabolite biosynthetic process | 5.66E-03 |
| 75 | GO:0009651: response to salt stress | 6.08E-03 |
| 76 | GO:0051607: defense response to virus | 6.08E-03 |
| 77 | GO:0001666: response to hypoxia | 6.32E-03 |
| 78 | GO:0009615: response to virus | 6.32E-03 |
| 79 | GO:0009627: systemic acquired resistance | 6.82E-03 |
| 80 | GO:0008219: cell death | 7.60E-03 |
| 81 | GO:0009817: defense response to fungus, incompatible interaction | 7.60E-03 |
| 82 | GO:0048767: root hair elongation | 7.87E-03 |
| 83 | GO:0010311: lateral root formation | 7.87E-03 |
| 84 | GO:0010043: response to zinc ion | 8.41E-03 |
| 85 | GO:0007568: aging | 8.41E-03 |
| 86 | GO:0006099: tricarboxylic acid cycle | 9.25E-03 |
| 87 | GO:0046686: response to cadmium ion | 9.34E-03 |
| 88 | GO:0009734: auxin-activated signaling pathway | 1.08E-02 |
| 89 | GO:0009636: response to toxic substance | 1.16E-02 |
| 90 | GO:0006855: drug transmembrane transport | 1.19E-02 |
| 91 | GO:0009735: response to cytokinin | 1.25E-02 |
| 92 | GO:0006812: cation transport | 1.26E-02 |
| 93 | GO:0050832: defense response to fungus | 2.12E-02 |
| 94 | GO:0006413: translational initiation | 2.38E-02 |
| 95 | GO:0010150: leaf senescence | 2.50E-02 |
| 96 | GO:0007166: cell surface receptor signaling pathway | 2.75E-02 |
| 97 | GO:0010468: regulation of gene expression | 2.84E-02 |
| 98 | GO:0080167: response to karrikin | 3.98E-02 |
| 99 | GO:0010200: response to chitin | 4.08E-02 |
| 100 | GO:0006869: lipid transport | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047634: agmatine N4-coumaroyltransferase activity | 0.00E+00 |
| 2 | GO:0004834: tryptophan synthase activity | 2.38E-06 |
| 3 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 4.60E-05 |
| 4 | GO:0033984: indole-3-glycerol-phosphate lyase activity | 4.60E-05 |
| 5 | GO:0008061: chitin binding | 8.62E-05 |
| 6 | GO:0045140: inositol phosphoceramide synthase activity | 1.13E-04 |
| 7 | GO:0047209: coniferyl-alcohol glucosyltransferase activity | 1.13E-04 |
| 8 | GO:0032934: sterol binding | 1.13E-04 |
| 9 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 1.95E-04 |
| 10 | GO:0004049: anthranilate synthase activity | 1.95E-04 |
| 11 | GO:0016656: monodehydroascorbate reductase (NADH) activity | 2.85E-04 |
| 12 | GO:0043023: ribosomal large subunit binding | 2.85E-04 |
| 13 | GO:0004031: aldehyde oxidase activity | 3.84E-04 |
| 14 | GO:0050302: indole-3-acetaldehyde oxidase activity | 3.84E-04 |
| 15 | GO:0010279: indole-3-acetic acid amido synthetase activity | 3.84E-04 |
| 16 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 3.84E-04 |
| 17 | GO:0010328: auxin influx transmembrane transporter activity | 3.84E-04 |
| 18 | GO:0042802: identical protein binding | 3.93E-04 |
| 19 | GO:0050660: flavin adenine dinucleotide binding | 6.06E-04 |
| 20 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 6.19E-04 |
| 21 | GO:0005242: inward rectifier potassium channel activity | 7.13E-04 |
| 22 | GO:0051020: GTPase binding | 7.13E-04 |
| 23 | GO:0004620: phospholipase activity | 8.33E-04 |
| 24 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 9.07E-04 |
| 25 | GO:0005506: iron ion binding | 9.53E-04 |
| 26 | GO:0043022: ribosome binding | 9.57E-04 |
| 27 | GO:0008142: oxysterol binding | 1.09E-03 |
| 28 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 1.22E-03 |
| 29 | GO:0071949: FAD binding | 1.22E-03 |
| 30 | GO:0004568: chitinase activity | 1.51E-03 |
| 31 | GO:0008171: O-methyltransferase activity | 1.51E-03 |
| 32 | GO:0004713: protein tyrosine kinase activity | 1.51E-03 |
| 33 | GO:0047372: acylglycerol lipase activity | 1.66E-03 |
| 34 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.98E-03 |
| 35 | GO:0010329: auxin efflux transmembrane transporter activity | 1.98E-03 |
| 36 | GO:0051536: iron-sulfur cluster binding | 2.67E-03 |
| 37 | GO:0031418: L-ascorbic acid binding | 2.67E-03 |
| 38 | GO:0004540: ribonuclease activity | 3.04E-03 |
| 39 | GO:0019825: oxygen binding | 3.41E-03 |
| 40 | GO:0005451: monovalent cation:proton antiporter activity | 4.04E-03 |
| 41 | GO:0030551: cyclic nucleotide binding | 4.04E-03 |
| 42 | GO:0005355: glucose transmembrane transporter activity | 4.47E-03 |
| 43 | GO:0015299: solute:proton antiporter activity | 4.47E-03 |
| 44 | GO:0010181: FMN binding | 4.47E-03 |
| 45 | GO:0004872: receptor activity | 4.68E-03 |
| 46 | GO:0015385: sodium:proton antiporter activity | 5.37E-03 |
| 47 | GO:0051213: dioxygenase activity | 6.32E-03 |
| 48 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 7.34E-03 |
| 49 | GO:0015238: drug transmembrane transporter activity | 7.87E-03 |
| 50 | GO:0009055: electron carrier activity | 8.24E-03 |
| 51 | GO:0003746: translation elongation factor activity | 8.96E-03 |
| 52 | GO:0020037: heme binding | 9.49E-03 |
| 53 | GO:0008422: beta-glucosidase activity | 9.53E-03 |
| 54 | GO:0051539: 4 iron, 4 sulfur cluster binding | 9.82E-03 |
| 55 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.13E-02 |
| 56 | GO:0016298: lipase activity | 1.35E-02 |
| 57 | GO:0045735: nutrient reservoir activity | 1.49E-02 |
| 58 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.59E-02 |
| 59 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.59E-02 |
| 60 | GO:0016740: transferase activity | 1.67E-02 |
| 61 | GO:0016746: transferase activity, transferring acyl groups | 1.73E-02 |
| 62 | GO:0015144: carbohydrate transmembrane transporter activity | 2.26E-02 |
| 63 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.38E-02 |
| 64 | GO:0015297: antiporter activity | 2.42E-02 |
| 65 | GO:0005351: sugar:proton symporter activity | 2.46E-02 |
| 66 | GO:0016757: transferase activity, transferring glycosyl groups | 2.51E-02 |
| 67 | GO:0008194: UDP-glycosyltransferase activity | 2.71E-02 |
| 68 | GO:0003743: translation initiation factor activity | 2.80E-02 |
| 69 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.97E-02 |
| 70 | GO:0008168: methyltransferase activity | 3.32E-02 |
| 71 | GO:0043531: ADP binding | 3.65E-02 |
| 72 | GO:0016491: oxidoreductase activity | 3.65E-02 |
| 73 | GO:0008233: peptidase activity | 3.93E-02 |
| 74 | GO:0004497: monooxygenase activity | 3.98E-02 |
| 75 | GO:0042803: protein homodimerization activity | 4.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045252: oxoglutarate dehydrogenase complex | 4.60E-05 |
| 2 | GO:0005950: anthranilate synthase complex | 1.13E-04 |
| 3 | GO:0016020: membrane | 1.76E-04 |
| 4 | GO:0005853: eukaryotic translation elongation factor 1 complex | 1.95E-04 |
| 5 | GO:0030687: preribosome, large subunit precursor | 8.33E-04 |
| 6 | GO:0005779: integral component of peroxisomal membrane | 1.09E-03 |
| 7 | GO:0012505: endomembrane system | 1.56E-03 |
| 8 | GO:0005886: plasma membrane | 3.20E-03 |
| 9 | GO:0005829: cytosol | 5.51E-03 |
| 10 | GO:0005778: peroxisomal membrane | 5.84E-03 |
| 11 | GO:0000325: plant-type vacuole | 8.41E-03 |
| 12 | GO:0016021: integral component of membrane | 1.09E-02 |
| 13 | GO:0009506: plasmodesma | 1.56E-02 |
| 14 | GO:0009570: chloroplast stroma | 1.67E-02 |
| 15 | GO:0005783: endoplasmic reticulum | 1.84E-02 |
| 16 | GO:0005802: trans-Golgi network | 2.19E-02 |
| 17 | GO:0005618: cell wall | 3.04E-02 |
| 18 | GO:0022627: cytosolic small ribosomal subunit | 3.06E-02 |
| 19 | GO:0009505: plant-type cell wall | 3.47E-02 |