co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G10940

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006105: succinate metabolic process	0.00E+00
2	GO:0043171: peptide catabolic process	0.00E+00
3	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
4	GO:0019484: beta-alanine catabolic process	0.00E+00
5	GO:1900490: positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity	0.00E+00
6	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
7	GO:0042344: indole glucosinolate catabolic process	6.53E-06
8	GO:0052544: defense response by callose deposition in cell wall	1.26E-05
9	GO:0006020: inositol metabolic process	1.50E-05
10	GO:0009817: defense response to fungus, incompatible interaction	2.85E-05
11	GO:0000380: alternative mRNA splicing, via spliceosome	4.46E-05
12	GO:1902265: abscisic acid homeostasis	1.93E-04
13	GO:0071366: cellular response to indolebutyric acid stimulus	1.93E-04
14	GO:0009865: pollen tube adhesion	1.93E-04
15	GO:0006540: glutamate decarboxylation to succinate	1.93E-04
16	GO:0032958: inositol phosphate biosynthetic process	1.93E-04
17	GO:0046167: glycerol-3-phosphate biosynthetic process	1.93E-04
18	GO:0009450: gamma-aminobutyric acid catabolic process	1.93E-04
19	GO:1990641: response to iron ion starvation	1.93E-04
20	GO:0001666: response to hypoxia	2.76E-04
21	GO:0009727: detection of ethylene stimulus	4.33E-04
22	GO:0006101: citrate metabolic process	4.33E-04
23	GO:0009257: 10-formyltetrahydrofolate biosynthetic process	4.33E-04
24	GO:0010033: response to organic substance	4.33E-04
25	GO:0006641: triglyceride metabolic process	4.33E-04
26	GO:0010119: regulation of stomatal movement	4.74E-04
27	GO:0002237: response to molecule of bacterial origin	5.65E-04
28	GO:0009651: response to salt stress	6.13E-04
29	GO:0006954: inflammatory response	7.06E-04
30	GO:0019563: glycerol catabolic process	7.06E-04
31	GO:1900140: regulation of seedling development	7.06E-04
32	GO:0090630: activation of GTPase activity	7.06E-04
33	GO:0030029: actin filament-based process	7.06E-04
34	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	7.06E-04
35	GO:0006072: glycerol-3-phosphate metabolic process	1.01E-03
36	GO:0015749: monosaccharide transport	1.01E-03
37	GO:0009113: purine nucleobase biosynthetic process	1.01E-03
38	GO:1901332: negative regulation of lateral root development	1.01E-03
39	GO:0006882: cellular zinc ion homeostasis	1.01E-03
40	GO:0010601: positive regulation of auxin biosynthetic process	1.01E-03
41	GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain	1.34E-03
42	GO:0010188: response to microbial phytotoxin	1.34E-03
43	GO:0006878: cellular copper ion homeostasis	1.34E-03
44	GO:0006646: phosphatidylethanolamine biosynthetic process	1.34E-03
45	GO:0009687: abscisic acid metabolic process	1.34E-03
46	GO:0015743: malate transport	1.34E-03
47	GO:0006536: glutamate metabolic process	1.34E-03
48	GO:0042742: defense response to bacterium	1.45E-03
49	GO:0010182: sugar mediated signaling pathway	1.51E-03
50	GO:0048544: recognition of pollen	1.62E-03
51	GO:0016926: protein desumoylation	1.70E-03
52	GO:0043097: pyrimidine nucleoside salvage	1.70E-03
53	GO:0006635: fatty acid beta-oxidation	1.85E-03
54	GO:0006206: pyrimidine nucleobase metabolic process	2.10E-03
55	GO:0000741: karyogamy	2.10E-03
56	GO:0050665: hydrogen peroxide biosynthetic process	2.10E-03
57	GO:0015691: cadmium ion transport	2.10E-03
58	GO:0042732: D-xylose metabolic process	2.10E-03
59	GO:0071281: cellular response to iron ion	2.11E-03
60	GO:0010286: heat acclimation	2.38E-03
61	GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity	2.52E-03
62	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	2.52E-03
63	GO:0048437: floral organ development	2.96E-03
64	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	2.96E-03
65	GO:0009396: folic acid-containing compound biosynthetic process	2.96E-03
66	GO:0010038: response to metal ion	2.96E-03
67	GO:0010044: response to aluminum ion	2.96E-03
68	GO:0098869: cellular oxidant detoxification	2.96E-03
69	GO:0048573: photoperiodism, flowering	3.14E-03
70	GO:0009819: drought recovery	3.43E-03
71	GO:0009690: cytokinin metabolic process	3.43E-03
72	GO:0006605: protein targeting	3.43E-03
73	GO:0032508: DNA duplex unwinding	3.43E-03
74	GO:0006102: isocitrate metabolic process	3.43E-03
75	GO:0009061: anaerobic respiration	3.43E-03
76	GO:0010228: vegetative to reproductive phase transition of meristem	3.49E-03
77	GO:0006811: ion transport	3.83E-03
78	GO:0001510: RNA methylation	3.93E-03
79	GO:0010043: response to zinc ion	4.01E-03
80	GO:0045087: innate immune response	4.40E-03
81	GO:0006098: pentose-phosphate shunt	4.44E-03
82	GO:0046916: cellular transition metal ion homeostasis	4.44E-03
83	GO:0010345: suberin biosynthetic process	4.44E-03
84	GO:0006099: tricarboxylic acid cycle	4.60E-03
85	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	4.99E-03
86	GO:0008202: steroid metabolic process	4.99E-03
87	GO:0035999: tetrahydrofolate interconversion	4.99E-03
88	GO:0009641: shade avoidance	5.55E-03
89	GO:0009682: induced systemic resistance	6.13E-03
90	GO:0016485: protein processing	6.13E-03
91	GO:0007165: signal transduction	6.18E-03
92	GO:0009737: response to abscisic acid	6.46E-03
93	GO:0010105: negative regulation of ethylene-activated signaling pathway	6.73E-03
94	GO:0016925: protein sumoylation	6.73E-03
95	GO:0009723: response to ethylene	6.90E-03
96	GO:0035556: intracellular signal transduction	6.98E-03
97	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	7.36E-03
98	GO:0080167: response to karrikin	7.54E-03
99	GO:0006541: glutamine metabolic process	8.01E-03
100	GO:0007034: vacuolar transport	8.01E-03
101	GO:0010143: cutin biosynthetic process	8.01E-03
102	GO:0005985: sucrose metabolic process	8.67E-03
103	GO:0010030: positive regulation of seed germination	8.67E-03
104	GO:0010025: wax biosynthetic process	9.35E-03
105	GO:0000162: tryptophan biosynthetic process	9.35E-03
106	GO:0006406: mRNA export from nucleus	1.01E-02
107	GO:0009695: jasmonic acid biosynthetic process	1.08E-02
108	GO:0006825: copper ion transport	1.08E-02
109	GO:0008299: isoprenoid biosynthetic process	1.08E-02
110	GO:0006396: RNA processing	1.12E-02
111	GO:0046686: response to cadmium ion	1.15E-02
112	GO:0030433: ubiquitin-dependent ERAD pathway	1.23E-02
113	GO:0031348: negative regulation of defense response	1.23E-02
114	GO:0071215: cellular response to abscisic acid stimulus	1.31E-02
115	GO:0001944: vasculature development	1.31E-02
116	GO:0009625: response to insect	1.31E-02
117	GO:0010227: floral organ abscission	1.31E-02
118	GO:0051028: mRNA transport	1.47E-02
119	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.47E-02
120	GO:0042335: cuticle development	1.55E-02
121	GO:0042391: regulation of membrane potential	1.55E-02
122	GO:0010501: RNA secondary structure unwinding	1.55E-02
123	GO:0010051: xylem and phloem pattern formation	1.55E-02
124	GO:0015991: ATP hydrolysis coupled proton transport	1.55E-02
125	GO:0042631: cellular response to water deprivation	1.55E-02
126	GO:0008360: regulation of cell shape	1.63E-02
127	GO:0010154: fruit development	1.63E-02
128	GO:0010197: polar nucleus fusion	1.63E-02
129	GO:0046323: glucose import	1.63E-02
130	GO:0009873: ethylene-activated signaling pathway	1.71E-02
131	GO:0009414: response to water deprivation	1.80E-02
132	GO:0010183: pollen tube guidance	1.81E-02
133	GO:0008654: phospholipid biosynthetic process	1.81E-02
134	GO:0009556: microsporogenesis	1.81E-02
135	GO:0007623: circadian rhythm	1.89E-02
136	GO:0009739: response to gibberellin	2.11E-02
137	GO:0019760: glucosinolate metabolic process	2.18E-02
138	GO:0009617: response to bacterium	2.25E-02
139	GO:0009735: response to cytokinin	2.28E-02
140	GO:0009911: positive regulation of flower development	2.47E-02
141	GO:0010029: regulation of seed germination	2.57E-02
142	GO:0009627: systemic acquired resistance	2.67E-02
143	GO:0006950: response to stress	2.77E-02
144	GO:0009409: response to cold	2.92E-02
145	GO:0006970: response to osmotic stress	3.15E-02
146	GO:0006468: protein phosphorylation	3.16E-02
147	GO:0006499: N-terminal protein myristoylation	3.20E-02
148	GO:0006511: ubiquitin-dependent protein catabolic process	3.73E-02
149	GO:0016192: vesicle-mediated transport	3.80E-02
150	GO:0030001: metal ion transport	3.87E-02
151	GO:0006897: endocytosis	3.99E-02
152	GO:0042542: response to hydrogen peroxide	4.11E-02
153	GO:0009640: photomorphogenesis	4.23E-02
154	GO:0009926: auxin polar transport	4.23E-02
155	GO:0051707: response to other organism	4.23E-02
156	GO:0000209: protein polyubiquitination	4.35E-02
157	GO:0006855: drug transmembrane transport	4.71E-02
158	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.84E-02
159	GO:0000165: MAPK cascade	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity	0.00E+00
2	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
3	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
4	GO:0004370: glycerol kinase activity	0.00E+00
5	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
6	GO:0047787: delta4-3-oxosteroid 5beta-reductase activity	0.00E+00
7	GO:0009045: xylose isomerase activity	0.00E+00
8	GO:0005253: anion channel activity	2.77E-05
9	GO:0004525: ribonuclease III activity	1.56E-04
10	GO:0000828: inositol hexakisphosphate kinase activity	1.93E-04
11	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	1.93E-04
12	GO:0003867: 4-aminobutyrate transaminase activity	1.93E-04
13	GO:0070006: metalloaminopeptidase activity	1.93E-04
14	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	1.93E-04
15	GO:0009679: hexose:proton symporter activity	1.93E-04
16	GO:0035671: enone reductase activity	1.93E-04
17	GO:0000829: inositol heptakisphosphate kinase activity	1.93E-04
18	GO:0010013: N-1-naphthylphthalamic acid binding	1.93E-04
19	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	1.93E-04
20	GO:0046870: cadmium ion binding	1.93E-04
21	GO:0004329: formate-tetrahydrofolate ligase activity	4.33E-04
22	GO:0019200: carbohydrate kinase activity	4.33E-04
23	GO:0032791: lead ion binding	4.33E-04
24	GO:0004609: phosphatidylserine decarboxylase activity	4.33E-04
25	GO:0003994: aconitate hydratase activity	4.33E-04
26	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	4.33E-04
27	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	4.33E-04
28	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	4.33E-04
29	GO:0004839: ubiquitin activating enzyme activity	4.33E-04
30	GO:0038199: ethylene receptor activity	4.33E-04
31	GO:0004175: endopeptidase activity	5.65E-04
32	GO:0017150: tRNA dihydrouridine synthase activity	7.06E-04
33	GO:0019948: SUMO activating enzyme activity	7.06E-04
34	GO:0005047: signal recognition particle binding	7.06E-04
35	GO:0019829: cation-transporting ATPase activity	7.06E-04
36	GO:0019706: protein-cysteine S-palmitoyltransferase activity	9.35E-04
37	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.01E-03
38	GO:0015086: cadmium ion transmembrane transporter activity	1.01E-03
39	GO:0004108: citrate (Si)-synthase activity	1.01E-03
40	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.01E-03
41	GO:0051740: ethylene binding	1.01E-03
42	GO:0004300: enoyl-CoA hydratase activity	1.01E-03
43	GO:0048027: mRNA 5'-UTR binding	1.01E-03
44	GO:0042277: peptide binding	1.34E-03
45	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	1.34E-03
46	GO:0004834: tryptophan synthase activity	1.34E-03
47	GO:0004737: pyruvate decarboxylase activity	1.34E-03
48	GO:0016929: SUMO-specific protease activity	1.70E-03
49	GO:0010294: abscisic acid glucosyltransferase activity	1.70E-03
50	GO:0015145: monosaccharide transmembrane transporter activity	1.70E-03
51	GO:0008641: small protein activating enzyme activity	1.70E-03
52	GO:0000293: ferric-chelate reductase activity	2.10E-03
53	GO:0019137: thioglucosidase activity	2.10E-03
54	GO:0005247: voltage-gated chloride channel activity	2.10E-03
55	GO:0030976: thiamine pyrophosphate binding	2.10E-03
56	GO:0004629: phospholipase C activity	2.10E-03
57	GO:0004849: uridine kinase activity	2.52E-03
58	GO:0004602: glutathione peroxidase activity	2.52E-03
59	GO:0004435: phosphatidylinositol phospholipase C activity	2.52E-03
60	GO:0005507: copper ion binding	2.87E-03
61	GO:0015140: malate transmembrane transporter activity	2.96E-03
62	GO:0016831: carboxy-lyase activity	2.96E-03
63	GO:0005096: GTPase activator activity	3.65E-03
64	GO:0005375: copper ion transmembrane transporter activity	3.93E-03
65	GO:0000989: transcription factor activity, transcription factor binding	4.44E-03
66	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	4.44E-03
67	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	4.99E-03
68	GO:0005524: ATP binding	5.17E-03
69	GO:0004673: protein histidine kinase activity	5.55E-03
70	GO:0004177: aminopeptidase activity	6.13E-03
71	GO:0000976: transcription regulatory region sequence-specific DNA binding	6.73E-03
72	GO:0016301: kinase activity	7.24E-03
73	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	7.36E-03
74	GO:0000155: phosphorelay sensor kinase activity	7.36E-03
75	GO:0031624: ubiquitin conjugating enzyme binding	8.01E-03
76	GO:0030552: cAMP binding	8.67E-03
77	GO:0030553: cGMP binding	8.67E-03
78	GO:0003729: mRNA binding	1.06E-02
79	GO:0008270: zinc ion binding	1.08E-02
80	GO:0005216: ion channel activity	1.08E-02
81	GO:0043424: protein histidine kinase binding	1.08E-02
82	GO:0004707: MAP kinase activity	1.15E-02
83	GO:0003723: RNA binding	1.34E-02
84	GO:0030551: cyclic nucleotide binding	1.55E-02
85	GO:0005249: voltage-gated potassium channel activity	1.55E-02
86	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	1.63E-02
87	GO:0000156: phosphorelay response regulator activity	2.08E-02
88	GO:0008237: metallopeptidase activity	2.27E-02
89	GO:0005200: structural constituent of cytoskeleton	2.27E-02
90	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.40E-02
91	GO:0042802: identical protein binding	2.40E-02
92	GO:0030247: polysaccharide binding	2.77E-02
93	GO:0102483: scopolin beta-glucosidase activity	2.77E-02
94	GO:0046982: protein heterodimerization activity	2.87E-02
95	GO:0004842: ubiquitin-protein transferase activity	3.01E-02
96	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.20E-02
97	GO:0050897: cobalt ion binding	3.31E-02
98	GO:0003697: single-stranded DNA binding	3.53E-02
99	GO:0008422: beta-glucosidase activity	3.76E-02
100	GO:0051539: 4 iron, 4 sulfur cluster binding	3.87E-02
101	GO:0005516: calmodulin binding	4.23E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0005886: plasma membrane	1.56E-05
3	GO:0005777: peroxisome	9.25E-05
4	GO:0033179: proton-transporting V-type ATPase, V0 domain	1.34E-03
5	GO:0032586: protein storage vacuole membrane	1.34E-03
6	GO:0005783: endoplasmic reticulum	1.52E-03
7	GO:0034707: chloride channel complex	2.10E-03
8	GO:0000815: ESCRT III complex	2.52E-03
9	GO:0030131: clathrin adaptor complex	3.43E-03
10	GO:0005802: trans-Golgi network	3.53E-03
11	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	3.93E-03
12	GO:0000326: protein storage vacuole	3.93E-03
13	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	3.93E-03
14	GO:0000786: nucleosome	4.20E-03
15	GO:0031090: organelle membrane	4.44E-03
16	GO:0030125: clathrin vesicle coat	5.55E-03
17	GO:0005737: cytoplasm	8.39E-03
18	GO:0030176: integral component of endoplasmic reticulum membrane	8.67E-03
19	GO:0005794: Golgi apparatus	8.70E-03
20	GO:0016021: integral component of membrane	9.21E-03
21	GO:0010008: endosome membrane	9.32E-03
22	GO:0005829: cytosol	9.83E-03
23	GO:0005905: clathrin-coated pit	1.15E-02
24	GO:0005768: endosome	1.59E-02
25	GO:0005774: vacuolar membrane	1.65E-02
26	GO:0031965: nuclear membrane	1.81E-02
27	GO:0000151: ubiquitin ligase complex	2.98E-02
28	GO:0005773: vacuole	3.67E-02
29	GO:0009506: plasmodesma	4.31E-02
30	GO:0048046: apoplast	4.77E-02
31	GO:0031966: mitochondrial membrane	4.96E-02