co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G10590

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006413: translational initiation	2.35E-06
2	GO:0045116: protein neddylation	2.73E-04
3	GO:0045040: protein import into mitochondrial outer membrane	3.37E-04
4	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	3.37E-04
5	GO:0009423: chorismate biosynthetic process	4.04E-04
6	GO:0006367: transcription initiation from RNA polymerase II promoter	6.21E-04
7	GO:0009073: aromatic amino acid family biosynthetic process	9.42E-04
8	GO:0045037: protein import into chloroplast stroma	1.03E-03
9	GO:0006626: protein targeting to mitochondrion	1.12E-03
10	GO:0006446: regulation of translational initiation	1.20E-03
11	GO:0034976: response to endoplasmic reticulum stress	1.39E-03
12	GO:0000027: ribosomal large subunit assembly	1.49E-03
13	GO:0030150: protein import into mitochondrial matrix	1.49E-03
14	GO:0007131: reciprocal meiotic recombination	1.80E-03
15	GO:0030433: ubiquitin-dependent ERAD pathway	1.80E-03
16	GO:0008033: tRNA processing	2.24E-03
17	GO:0010252: auxin homeostasis	3.09E-03
18	GO:0048573: photoperiodism, flowering	3.89E-03
19	GO:0009793: embryo development ending in seed dormancy	5.01E-03
20	GO:0006099: tricarboxylic acid cycle	5.05E-03
21	GO:0009965: leaf morphogenesis	6.33E-03
22	GO:0000398: mRNA splicing, via spliceosome	1.01E-02
23	GO:0006412: translation	1.41E-02
24	GO:0015031: protein transport	1.46E-02
25	GO:0006470: protein dephosphorylation	1.48E-02
26	GO:0046686: response to cadmium ion	1.79E-02
27	GO:0042254: ribosome biogenesis	1.86E-02
28	GO:0007049: cell cycle	1.99E-02
29	GO:0045454: cell redox homeostasis	2.43E-02
30	GO:0006886: intracellular protein transport	2.49E-02
31	GO:0006281: DNA repair	2.83E-02
32	GO:0009734: auxin-activated signaling pathway	3.61E-02
33	GO:0009651: response to salt stress	3.86E-02
34	GO:0009735: response to cytokinin	3.99E-02
35	GO:0051301: cell division	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0003856: 3-dehydroquinate synthase activity	0.00E+00
2	GO:0003743: translation initiation factor activity	3.84E-06
3	GO:0048037: cofactor binding	2.30E-05
4	GO:0004776: succinate-CoA ligase (GDP-forming) activity	5.89E-05
5	GO:0019781: NEDD8 activating enzyme activity	5.89E-05
6	GO:0004775: succinate-CoA ligase (ADP-forming) activity	5.89E-05
7	GO:0000166: nucleotide binding	7.19E-05
8	GO:0030628: pre-mRNA 3'-splice site binding	1.04E-04
9	GO:0008641: small protein activating enzyme activity	2.73E-04
10	GO:0036402: proteasome-activating ATPase activity	3.37E-04
11	GO:0008312: 7S RNA binding	5.46E-04
12	GO:0017025: TBP-class protein binding	1.30E-03
13	GO:0046872: metal ion binding	1.74E-03
14	GO:0003756: protein disulfide isomerase activity	2.02E-03
15	GO:0004527: exonuclease activity	2.36E-03
16	GO:0001085: RNA polymerase II transcription factor binding	2.36E-03
17	GO:0010181: FMN binding	2.48E-03
18	GO:0004721: phosphoprotein phosphatase activity	3.89E-03
19	GO:0003735: structural constituent of ribosome	4.14E-03
20	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.17E-03
21	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.60E-03
22	GO:0016887: ATPase activity	4.95E-03
23	GO:0051539: 4 iron, 4 sulfur cluster binding	5.36E-03
24	GO:0019843: rRNA binding	1.07E-02
25	GO:0016829: lyase activity	1.14E-02
26	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	1.18E-02
27	GO:0008565: protein transporter activity	1.22E-02
28	GO:0016491: oxidoreductase activity	1.52E-02
29	GO:0003729: mRNA binding	1.71E-02
30	GO:0003682: chromatin binding	1.91E-02
31	GO:0003723: RNA binding	2.34E-02
32	GO:0004722: protein serine/threonine phosphatase activity	2.60E-02
33	GO:0016740: transferase activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0019867: outer membrane	0.00E+00
2	GO:0005852: eukaryotic translation initiation factor 3 complex	1.68E-05
3	GO:0005744: mitochondrial inner membrane presequence translocase complex	6.90E-05
4	GO:0005672: transcription factor TFIIA complex	1.04E-04
5	GO:0089701: U2AF	1.04E-04
6	GO:0030130: clathrin coat of trans-Golgi network vesicle	1.04E-04
7	GO:0030132: clathrin coat of coated pit	1.04E-04
8	GO:0031597: cytosolic proteasome complex	4.04E-04
9	GO:0031595: nuclear proteasome complex	4.74E-04
10	GO:0005742: mitochondrial outer membrane translocase complex	6.21E-04
11	GO:0005763: mitochondrial small ribosomal subunit	6.98E-04
12	GO:0008540: proteasome regulatory particle, base subcomplex	7.77E-04
13	GO:0005741: mitochondrial outer membrane	1.70E-03
14	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.95E-03
15	GO:0005743: mitochondrial inner membrane	2.99E-03
16	GO:0005788: endoplasmic reticulum lumen	3.62E-03
17	GO:0005667: transcription factor complex	3.75E-03
18	GO:0005739: mitochondrion	4.12E-03
19	GO:0005829: cytosol	4.93E-03
20	GO:0005856: cytoskeleton	6.33E-03
21	GO:0000502: proteasome complex	7.18E-03
22	GO:0005681: spliceosomal complex	8.06E-03
23	GO:0016607: nuclear speck	8.24E-03
24	GO:0009706: chloroplast inner membrane	9.17E-03
25	GO:0005618: cell wall	9.92E-03
26	GO:0005622: intracellular	1.01E-02
27	GO:0009543: chloroplast thylakoid lumen	1.07E-02
28	GO:0005623: cell	1.09E-02
29	GO:0009524: phragmoplast	1.11E-02
30	GO:0005840: ribosome	1.20E-02
31	GO:0009536: plastid	1.41E-02
32	GO:0046658: anchored component of plasma membrane	1.64E-02
33	GO:0022625: cytosolic large ribosomal subunit	2.22E-02
34	GO:0022626: cytosolic ribosome	4.12E-02