co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G10140

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043269: regulation of ion transport	0.00E+00
2	GO:0033587: shikimate biosynthetic process	0.00E+00
3	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
4	GO:0009061: anaerobic respiration	5.57E-05
5	GO:0051245: negative regulation of cellular defense response	9.88E-05
6	GO:0006481: C-terminal protein methylation	9.88E-05
7	GO:0010941: regulation of cell death	9.88E-05
8	GO:0008202: steroid metabolic process	1.06E-04
9	GO:0010150: leaf senescence	1.22E-04
10	GO:0043069: negative regulation of programmed cell death	1.26E-04
11	GO:0002215: defense response to nematode	2.32E-04
12	GO:0060919: auxin influx	2.32E-04
13	GO:0015865: purine nucleotide transport	2.32E-04
14	GO:2000693: positive regulation of seed maturation	2.32E-04
15	GO:0019441: tryptophan catabolic process to kynurenine	2.32E-04
16	GO:0031408: oxylipin biosynthetic process	3.84E-04
17	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	3.86E-04
18	GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity	3.86E-04
19	GO:0010498: proteasomal protein catabolic process	3.86E-04
20	GO:0048586: regulation of long-day photoperiodism, flowering	3.86E-04
21	GO:0046902: regulation of mitochondrial membrane permeability	5.54E-04
22	GO:0006612: protein targeting to membrane	5.54E-04
23	GO:0010255: glucose mediated signaling pathway	5.54E-04
24	GO:0001676: long-chain fatty acid metabolic process	5.54E-04
25	GO:0019438: aromatic compound biosynthetic process	5.54E-04
26	GO:0006624: vacuolar protein processing	5.54E-04
27	GO:0010363: regulation of plant-type hypersensitive response	7.37E-04
28	GO:0030308: negative regulation of cell growth	9.32E-04
29	GO:0010315: auxin efflux	1.14E-03
30	GO:0033365: protein localization to organelle	1.14E-03
31	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.14E-03
32	GO:0046470: phosphatidylcholine metabolic process	1.59E-03
33	GO:0071669: plant-type cell wall organization or biogenesis	1.59E-03
34	GO:0070370: cellular heat acclimation	1.59E-03
35	GO:1900057: positive regulation of leaf senescence	1.59E-03
36	GO:0016559: peroxisome fission	1.84E-03
37	GO:0009808: lignin metabolic process	2.10E-03
38	GO:0055085: transmembrane transport	2.24E-03
39	GO:0051707: response to other organism	2.27E-03
40	GO:0007338: single fertilization	2.37E-03
41	GO:0006098: pentose-phosphate shunt	2.37E-03
42	GO:0016571: histone methylation	2.65E-03
43	GO:0007064: mitotic sister chromatid cohesion	2.95E-03
44	GO:0006535: cysteine biosynthetic process from serine	2.95E-03
45	GO:0006032: chitin catabolic process	2.95E-03
46	GO:0052544: defense response by callose deposition in cell wall	3.25E-03
47	GO:0000272: polysaccharide catabolic process	3.25E-03
48	GO:0006378: mRNA polyadenylation	3.25E-03
49	GO:0071365: cellular response to auxin stimulus	3.57E-03
50	GO:0009626: plant-type hypersensitive response	3.82E-03
51	GO:0010540: basipetal auxin transport	4.22E-03
52	GO:0034605: cellular response to heat	4.22E-03
53	GO:0007031: peroxisome organization	4.57E-03
54	GO:0042343: indole glucosinolate metabolic process	4.57E-03
55	GO:0010167: response to nitrate	4.57E-03
56	GO:0006979: response to oxidative stress	4.60E-03
57	GO:0000162: tryptophan biosynthetic process	4.92E-03
58	GO:0019344: cysteine biosynthetic process	5.28E-03
59	GO:0009863: salicylic acid mediated signaling pathway	5.28E-03
60	GO:0048278: vesicle docking	6.03E-03
61	GO:0016998: cell wall macromolecule catabolic process	6.03E-03
62	GO:0030433: ubiquitin-dependent ERAD pathway	6.42E-03
63	GO:0071456: cellular response to hypoxia	6.42E-03
64	GO:0000271: polysaccharide biosynthetic process	8.07E-03
65	GO:0010468: regulation of gene expression	8.86E-03
66	GO:0046686: response to cadmium ion	8.91E-03
67	GO:0061025: membrane fusion	8.94E-03
68	GO:0009749: response to glucose	9.39E-03
69	GO:0009851: auxin biosynthetic process	9.39E-03
70	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	9.85E-03
71	GO:0009630: gravitropism	1.03E-02
72	GO:1901657: glycosyl compound metabolic process	1.08E-02
73	GO:0009826: unidimensional cell growth	1.11E-02
74	GO:0009567: double fertilization forming a zygote and endosperm	1.13E-02
75	GO:0006464: cellular protein modification process	1.13E-02
76	GO:0071805: potassium ion transmembrane transport	1.18E-02
77	GO:0051607: defense response to virus	1.23E-02
78	GO:0001666: response to hypoxia	1.28E-02
79	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.33E-02
80	GO:0006906: vesicle fusion	1.38E-02
81	GO:0006950: response to stress	1.43E-02
82	GO:0055114: oxidation-reduction process	1.50E-02
83	GO:0009817: defense response to fungus, incompatible interaction	1.54E-02
84	GO:0030244: cellulose biosynthetic process	1.54E-02
85	GO:0008219: cell death	1.54E-02
86	GO:0048767: root hair elongation	1.60E-02
87	GO:0009832: plant-type cell wall biogenesis	1.60E-02
88	GO:0006811: ion transport	1.65E-02
89	GO:0010043: response to zinc ion	1.71E-02
90	GO:0009867: jasmonic acid mediated signaling pathway	1.82E-02
91	GO:0006869: lipid transport	1.88E-02
92	GO:0042742: defense response to bacterium	1.92E-02
93	GO:0006839: mitochondrial transport	2.00E-02
94	GO:0030001: metal ion transport	2.00E-02
95	GO:0006897: endocytosis	2.06E-02
96	GO:0006631: fatty acid metabolic process	2.06E-02
97	GO:0006887: exocytosis	2.06E-02
98	GO:0006629: lipid metabolic process	2.11E-02
99	GO:0042542: response to hydrogen peroxide	2.12E-02
100	GO:0009926: auxin polar transport	2.18E-02
101	GO:0050832: defense response to fungus	2.35E-02
102	GO:0009809: lignin biosynthetic process	2.70E-02
103	GO:0006813: potassium ion transport	2.70E-02
104	GO:0009873: ethylene-activated signaling pathway	2.73E-02
105	GO:0051603: proteolysis involved in cellular protein catabolic process	2.77E-02
106	GO:0009409: response to cold	2.81E-02
107	GO:0048367: shoot system development	3.11E-02
108	GO:0005975: carbohydrate metabolic process	3.24E-02
109	GO:0009908: flower development	3.39E-02
110	GO:0009553: embryo sac development	3.39E-02
111	GO:0009742: brassinosteroid mediated signaling pathway	3.62E-02
112	GO:0009738: abscisic acid-activated signaling pathway	3.63E-02
113	GO:0009611: response to wounding	3.83E-02
114	GO:0035556: intracellular signal transduction	3.95E-02
115	GO:0006457: protein folding	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0008142: oxysterol binding	7.06E-05
2	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	9.88E-05
3	GO:0033984: indole-3-glycerol-phosphate lyase activity	9.88E-05
4	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	9.88E-05
5	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	9.88E-05
6	GO:0047372: acylglycerol lipase activity	1.48E-04
7	GO:0032934: sterol binding	2.32E-04
8	GO:0004142: diacylglycerol cholinephosphotransferase activity	2.32E-04
9	GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	2.32E-04
10	GO:0004061: arylformamidase activity	2.32E-04
11	GO:0004566: beta-glucuronidase activity	2.32E-04
12	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	3.86E-04
13	GO:0016595: glutamate binding	3.86E-04
14	GO:0004834: tryptophan synthase activity	7.37E-04
15	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	7.37E-04
16	GO:0010328: auxin influx transmembrane transporter activity	7.37E-04
17	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	9.32E-04
18	GO:0005496: steroid binding	9.32E-04
19	GO:0005471: ATP:ADP antiporter activity	9.32E-04
20	GO:0036402: proteasome-activating ATPase activity	1.14E-03
21	GO:0004124: cysteine synthase activity	1.36E-03
22	GO:0051753: mannan synthase activity	1.36E-03
23	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	1.36E-03
24	GO:0102425: myricetin 3-O-glucosyltransferase activity	1.59E-03
25	GO:0102360: daphnetin 3-O-glucosyltransferase activity	1.59E-03
26	GO:0004620: phospholipase activity	1.59E-03
27	GO:0015288: porin activity	1.84E-03
28	GO:0004033: aldo-keto reductase (NADP) activity	1.84E-03
29	GO:0047893: flavonol 3-O-glucosyltransferase activity	1.84E-03
30	GO:0071949: FAD binding	2.37E-03
31	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.37E-03
32	GO:0009672: auxin:proton symporter activity	2.65E-03
33	GO:0004568: chitinase activity	2.95E-03
34	GO:0008171: O-methyltransferase activity	2.95E-03
35	GO:0004713: protein tyrosine kinase activity	2.95E-03
36	GO:0005543: phospholipid binding	3.25E-03
37	GO:0045735: nutrient reservoir activity	3.59E-03
38	GO:0010329: auxin efflux transmembrane transporter activity	3.89E-03
39	GO:0015266: protein channel activity	3.89E-03
40	GO:0004175: endopeptidase activity	4.22E-03
41	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	4.22E-03
42	GO:0017025: TBP-class protein binding	4.57E-03
43	GO:0008061: chitin binding	4.57E-03
44	GO:0015079: potassium ion transmembrane transporter activity	5.65E-03
45	GO:0035251: UDP-glucosyltransferase activity	6.03E-03
46	GO:0016760: cellulose synthase (UDP-forming) activity	6.82E-03
47	GO:0004672: protein kinase activity	8.15E-03
48	GO:0010181: FMN binding	8.94E-03
49	GO:0020037: heme binding	9.08E-03
50	GO:0004197: cysteine-type endopeptidase activity	1.03E-02
51	GO:0016759: cellulose synthase activity	1.13E-02
52	GO:0051213: dioxygenase activity	1.28E-02
53	GO:0102483: scopolin beta-glucosidase activity	1.43E-02
54	GO:0016787: hydrolase activity	1.44E-02
55	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.49E-02
56	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.54E-02
57	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.94E-02
58	GO:0008422: beta-glucosidase activity	1.94E-02
59	GO:0000149: SNARE binding	1.94E-02
60	GO:0004364: glutathione transferase activity	2.12E-02
61	GO:0005484: SNAP receptor activity	2.18E-02
62	GO:0016491: oxidoreductase activity	2.72E-02
63	GO:0016298: lipase activity	2.77E-02
64	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.25E-02
65	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.25E-02
66	GO:0016758: transferase activity, transferring hexosyl groups	3.99E-02
67	GO:0030170: pyridoxal phosphate binding	4.38E-02
68	GO:0016740: transferase activity	4.56E-02
69	GO:0015144: carbohydrate transmembrane transporter activity	4.62E-02
70	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0005849: mRNA cleavage factor complex	5.54E-04
2	GO:0000323: lytic vacuole	5.54E-04
3	GO:0009527: plastid outer membrane	7.37E-04
4	GO:0005778: peroxisomal membrane	9.73E-04
5	GO:0005783: endoplasmic reticulum	1.11E-03
6	GO:0030173: integral component of Golgi membrane	1.36E-03
7	GO:0031597: cytosolic proteasome complex	1.36E-03
8	GO:0031595: nuclear proteasome complex	1.59E-03
9	GO:0016021: integral component of membrane	1.80E-03
10	GO:0046930: pore complex	2.10E-03
11	GO:0005779: integral component of peroxisomal membrane	2.10E-03
12	GO:0008540: proteasome regulatory particle, base subcomplex	2.65E-03
13	GO:0005765: lysosomal membrane	3.25E-03
14	GO:0005886: plasma membrane	3.38E-03
15	GO:0005578: proteinaceous extracellular matrix	3.89E-03
16	GO:0005905: clathrin-coated pit	6.03E-03
17	GO:0005773: vacuole	6.12E-03
18	GO:0005744: mitochondrial inner membrane presequence translocase complex	7.23E-03
19	GO:0030136: clathrin-coated vesicle	7.64E-03
20	GO:0005774: vacuolar membrane	9.04E-03
21	GO:0005794: Golgi apparatus	1.02E-02
22	GO:0009707: chloroplast outer membrane	1.54E-02
23	GO:0000325: plant-type vacuole	1.71E-02
24	GO:0005743: mitochondrial inner membrane	1.97E-02
25	GO:0031201: SNARE complex	2.06E-02
26	GO:0000502: proteasome complex	2.70E-02
27	GO:0010008: endosome membrane	3.11E-02
28	GO:0005789: endoplasmic reticulum membrane	3.27E-02
29	GO:0012505: endomembrane system	3.39E-02
30	GO:0005777: peroxisome	4.29E-02