co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G10020

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901485: positive regulation of transcription factor catabolic process	0.00E+00
2	GO:0080127: fruit septum development	0.00E+00
3	GO:0010583: response to cyclopentenone	9.01E-06
4	GO:0042546: cell wall biogenesis	8.18E-05
5	GO:0071555: cell wall organization	8.60E-05
6	GO:0000271: polysaccharide biosynthetic process	1.11E-04
7	GO:0045489: pectin biosynthetic process	1.25E-04
8	GO:0045010: actin nucleation	1.59E-04
9	GO:0006723: cuticle hydrocarbon biosynthetic process	1.95E-04
10	GO:0033481: galacturonate biosynthetic process	1.95E-04
11	GO:0010411: xyloglucan metabolic process	3.51E-04
12	GO:0009416: response to light stimulus	3.67E-04
13	GO:0000038: very long-chain fatty acid metabolic process	3.91E-04
14	GO:0007154: cell communication	4.38E-04
15	GO:0071497: cellular response to freezing	4.38E-04
16	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	4.38E-04
17	GO:0030036: actin cytoskeleton organization	5.09E-04
18	GO:0033591: response to L-ascorbic acid	7.14E-04
19	GO:0043447: alkane biosynthetic process	7.14E-04
20	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	7.14E-04
21	GO:0005992: trehalose biosynthetic process	7.89E-04
22	GO:0015749: monosaccharide transport	1.02E-03
23	GO:0051016: barbed-end actin filament capping	1.02E-03
24	GO:1902476: chloride transmembrane transport	1.02E-03
25	GO:0032456: endocytic recycling	1.02E-03
26	GO:0019722: calcium-mediated signaling	1.22E-03
27	GO:2000038: regulation of stomatal complex development	1.35E-03
28	GO:0042335: cuticle development	1.42E-03
29	GO:0009741: response to brassinosteroid	1.53E-03
30	GO:0032876: negative regulation of DNA endoreduplication	1.72E-03
31	GO:0030308: negative regulation of cell growth	1.72E-03
32	GO:2000762: regulation of phenylpropanoid metabolic process	1.72E-03
33	GO:0009742: brassinosteroid mediated signaling pathway	1.81E-03
34	GO:0060918: auxin transport	2.12E-03
35	GO:1900425: negative regulation of defense response to bacterium	2.12E-03
36	GO:0003006: developmental process involved in reproduction	2.12E-03
37	GO:0010090: trichome morphogenesis	2.14E-03
38	GO:0009828: plant-type cell wall loosening	2.28E-03
39	GO:0007267: cell-cell signaling	2.42E-03
40	GO:0045926: negative regulation of growth	2.54E-03
41	GO:0010555: response to mannitol	2.54E-03
42	GO:2000037: regulation of stomatal complex patterning	2.54E-03
43	GO:2000067: regulation of root morphogenesis	2.54E-03
44	GO:0006633: fatty acid biosynthetic process	2.98E-03
45	GO:0050829: defense response to Gram-negative bacterium	3.00E-03
46	GO:0006821: chloride transport	3.00E-03
47	GO:0051510: regulation of unidimensional cell growth	3.00E-03
48	GO:0040008: regulation of growth	3.17E-03
49	GO:0008610: lipid biosynthetic process	3.47E-03
50	GO:0070413: trehalose metabolism in response to stress	3.47E-03
51	GO:0006402: mRNA catabolic process	3.47E-03
52	GO:0007186: G-protein coupled receptor signaling pathway	3.97E-03
53	GO:0010099: regulation of photomorphogenesis	3.97E-03
54	GO:0007568: aging	4.08E-03
55	GO:0016051: carbohydrate biosynthetic process	4.47E-03
56	GO:0048507: meristem development	4.49E-03
57	GO:0051865: protein autoubiquitination	4.49E-03
58	GO:0000902: cell morphogenesis	4.49E-03
59	GO:0009734: auxin-activated signaling pathway	4.64E-03
60	GO:0009638: phototropism	5.04E-03
61	GO:0009826: unidimensional cell growth	5.58E-03
62	GO:0043069: negative regulation of programmed cell death	5.61E-03
63	GO:0009744: response to sucrose	5.76E-03
64	GO:0009750: response to fructose	6.20E-03
65	GO:0009733: response to auxin	6.70E-03
66	GO:0016024: CDP-diacylglycerol biosynthetic process	6.81E-03
67	GO:0010582: floral meristem determinacy	6.81E-03
68	GO:0015706: nitrate transport	6.81E-03
69	GO:0008361: regulation of cell size	6.81E-03
70	GO:2000028: regulation of photoperiodism, flowering	7.44E-03
71	GO:0018107: peptidyl-threonine phosphorylation	7.44E-03
72	GO:0009585: red, far-red light phototransduction	7.75E-03
73	GO:0048467: gynoecium development	8.10E-03
74	GO:0034605: cellular response to heat	8.10E-03
75	GO:0010143: cutin biosynthetic process	8.10E-03
76	GO:0010540: basipetal auxin transport	8.10E-03
77	GO:0010167: response to nitrate	8.77E-03
78	GO:0009969: xyloglucan biosynthetic process	8.77E-03
79	GO:0009225: nucleotide-sugar metabolic process	8.77E-03
80	GO:0010025: wax biosynthetic process	9.46E-03
81	GO:0006833: water transport	9.46E-03
82	GO:0019953: sexual reproduction	1.09E-02
83	GO:0016998: cell wall macromolecule catabolic process	1.17E-02
84	GO:0010017: red or far-red light signaling pathway	1.24E-02
85	GO:0035428: hexose transmembrane transport	1.24E-02
86	GO:0009751: response to salicylic acid	1.24E-02
87	GO:0006629: lipid metabolic process	1.26E-02
88	GO:0006468: protein phosphorylation	1.37E-02
89	GO:0042631: cellular response to water deprivation	1.57E-02
90	GO:0000226: microtubule cytoskeleton organization	1.57E-02
91	GO:0034220: ion transmembrane transport	1.57E-02
92	GO:0010087: phloem or xylem histogenesis	1.57E-02
93	GO:0048653: anther development	1.57E-02
94	GO:0010305: leaf vascular tissue pattern formation	1.65E-02
95	GO:0009958: positive gravitropism	1.65E-02
96	GO:0046323: glucose import	1.65E-02
97	GO:0009791: post-embryonic development	1.83E-02
98	GO:0009749: response to glucose	1.83E-02
99	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.92E-02
100	GO:0071554: cell wall organization or biogenesis	1.92E-02
101	GO:0048235: pollen sperm cell differentiation	2.01E-02
102	GO:0007264: small GTPase mediated signal transduction	2.01E-02
103	GO:0030154: cell differentiation	2.17E-02
104	GO:0019760: glucosinolate metabolic process	2.20E-02
105	GO:0016126: sterol biosynthetic process	2.50E-02
106	GO:0009738: abscisic acid-activated signaling pathway	2.50E-02
107	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.60E-02
108	GO:0048573: photoperiodism, flowering	2.80E-02
109	GO:0016311: dephosphorylation	2.91E-02
110	GO:0048767: root hair elongation	3.12E-02
111	GO:0009860: pollen tube growth	3.20E-02
112	GO:0010218: response to far red light	3.23E-02
113	GO:0010119: regulation of stomatal movement	3.34E-02
114	GO:0009637: response to blue light	3.57E-02
115	GO:0080167: response to karrikin	3.68E-02
116	GO:0010200: response to chitin	3.80E-02
117	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.80E-02
118	GO:0046777: protein autophosphorylation	3.93E-02
119	GO:0010114: response to red light	4.27E-02
120	GO:0045454: cell redox homeostasis	4.39E-02
121	GO:0031347: regulation of defense response	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0080132: fatty acid alpha-hydroxylase activity	1.95E-04
2	GO:0009671: nitrate:proton symporter activity	1.95E-04
3	GO:0003838: sterol 24-C-methyltransferase activity	1.95E-04
4	GO:0008252: nucleotidase activity	1.95E-04
5	GO:0004864: protein phosphatase inhibitor activity	3.37E-04
6	GO:0004805: trehalose-phosphatase activity	3.37E-04
7	GO:0048531: beta-1,3-galactosyltransferase activity	4.38E-04
8	GO:0016757: transferase activity, transferring glycosyl groups	6.64E-04
9	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	7.14E-04
10	GO:0031683: G-protein beta/gamma-subunit complex binding	7.14E-04
11	GO:0047274: galactinol-sucrose galactosyltransferase activity	7.14E-04
12	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	7.14E-04
13	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	7.14E-04
14	GO:0001664: G-protein coupled receptor binding	7.14E-04
15	GO:0033843: xyloglucan 6-xylosyltransferase activity	1.02E-03
16	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.04E-03
17	GO:0050378: UDP-glucuronate 4-epimerase activity	1.35E-03
18	GO:0005253: anion channel activity	1.35E-03
19	GO:0044212: transcription regulatory region DNA binding	1.50E-03
20	GO:0009922: fatty acid elongase activity	1.72E-03
21	GO:0015145: monosaccharide transmembrane transporter activity	1.72E-03
22	GO:0002020: protease binding	1.72E-03
23	GO:0004872: receptor activity	1.76E-03
24	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.89E-03
25	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.12E-03
26	GO:0035252: UDP-xylosyltransferase activity	2.12E-03
27	GO:0010427: abscisic acid binding	2.12E-03
28	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.12E-03
29	GO:0005247: voltage-gated chloride channel activity	2.12E-03
30	GO:0016758: transferase activity, transferring hexosyl groups	2.16E-03
31	GO:0016791: phosphatase activity	2.28E-03
32	GO:0016759: cellulose synthase activity	2.28E-03
33	GO:0019900: kinase binding	2.54E-03
34	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.59E-03
35	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.19E-03
36	GO:0015112: nitrate transmembrane transporter activity	5.04E-03
37	GO:0043565: sequence-specific DNA binding	5.24E-03
38	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	8.10E-03
39	GO:0008134: transcription factor binding	1.02E-02
40	GO:0004871: signal transducer activity	1.03E-02
41	GO:0003924: GTPase activity	1.26E-02
42	GO:0004674: protein serine/threonine kinase activity	1.29E-02
43	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.55E-02
44	GO:0005515: protein binding	1.71E-02
45	GO:0005355: glucose transmembrane transporter activity	1.74E-02
46	GO:0051015: actin filament binding	2.11E-02
47	GO:0005200: structural constituent of cytoskeleton	2.30E-02
48	GO:0016413: O-acetyltransferase activity	2.40E-02
49	GO:0015250: water channel activity	2.50E-02
50	GO:0004806: triglyceride lipase activity	2.80E-02
51	GO:0030247: polysaccharide binding	2.80E-02
52	GO:0004842: ubiquitin-protein transferase activity	3.08E-02
53	GO:0004672: protein kinase activity	3.36E-02
54	GO:0003993: acid phosphatase activity	3.68E-02
55	GO:0004185: serine-type carboxypeptidase activity	4.27E-02
56	GO:0005516: calmodulin binding	4.32E-02
57	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	4.39E-02
58	GO:0043621: protein self-association	4.52E-02
59	GO:0042803: protein homodimerization activity	4.60E-02
60	GO:0005525: GTP binding	4.81E-02
61	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.87E-05
2	GO:0031225: anchored component of membrane	2.14E-04
3	GO:0009506: plasmodesma	2.43E-04
4	GO:0005794: Golgi apparatus	2.95E-04
5	GO:0046658: anchored component of plasma membrane	8.73E-04
6	GO:0035619: root hair tip	1.02E-03
7	GO:0031209: SCAR complex	2.12E-03
8	GO:0034707: chloride channel complex	2.12E-03
9	GO:0032588: trans-Golgi network membrane	2.12E-03
10	GO:0016021: integral component of membrane	2.26E-03
11	GO:0009505: plant-type cell wall	2.35E-03
12	GO:0000139: Golgi membrane	2.74E-03
13	GO:0031901: early endosome membrane	4.49E-03
14	GO:0005856: cytoskeleton	6.46E-03
15	GO:0005773: vacuole	1.51E-02
16	GO:0032580: Golgi cisterna membrane	2.20E-02
17	GO:0005618: cell wall	2.20E-02
18	GO:0030529: intracellular ribonucleoprotein complex	2.50E-02
19	GO:0005576: extracellular region	2.86E-02
20	GO:0000786: nucleosome	3.46E-02
21	GO:0005802: trans-Golgi network	4.66E-02
22	GO:0048046: apoplast	4.90E-02