Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G09970

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0030149: sphingolipid catabolic process0.00E+00
2GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
3GO:0072722: response to amitrole0.00E+00
4GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
5GO:0015690: aluminum cation transport0.00E+00
6GO:0042430: indole-containing compound metabolic process0.00E+00
7GO:0070212: protein poly-ADP-ribosylation0.00E+00
8GO:0046686: response to cadmium ion1.06E-08
9GO:0009617: response to bacterium9.76E-08
10GO:0010120: camalexin biosynthetic process6.18E-06
11GO:0009615: response to virus2.88E-05
12GO:0070588: calcium ion transmembrane transport4.59E-05
13GO:0006564: L-serine biosynthetic process6.16E-05
14GO:0009651: response to salt stress1.28E-04
15GO:0009408: response to heat1.86E-04
16GO:0006979: response to oxidative stress1.88E-04
17GO:0033306: phytol metabolic process2.34E-04
18GO:0009700: indole phytoalexin biosynthetic process2.34E-04
19GO:0080120: CAAX-box protein maturation2.34E-04
20GO:0071586: CAAX-box protein processing2.34E-04
21GO:0080173: male-female gamete recognition during double fertilization2.34E-04
22GO:0055081: anion homeostasis2.34E-04
23GO:0010193: response to ozone2.41E-04
24GO:0010112: regulation of systemic acquired resistance3.13E-04
25GO:0009051: pentose-phosphate shunt, oxidative branch3.13E-04
26GO:0043069: negative regulation of programmed cell death4.36E-04
27GO:0009627: systemic acquired resistance4.57E-04
28GO:0015865: purine nucleotide transport5.20E-04
29GO:0019752: carboxylic acid metabolic process5.20E-04
30GO:0006123: mitochondrial electron transport, cytochrome c to oxygen5.20E-04
31GO:0019521: D-gluconate metabolic process5.20E-04
32GO:0009407: toxin catabolic process6.31E-04
33GO:0006006: glucose metabolic process6.54E-04
34GO:0006099: tricarboxylic acid cycle7.94E-04
35GO:0010581: regulation of starch biosynthetic process8.44E-04
36GO:0010272: response to silver ion8.44E-04
37GO:0045039: protein import into mitochondrial inner membrane8.44E-04
38GO:0048281: inflorescence morphogenesis8.44E-04
39GO:0050832: defense response to fungus9.29E-04
40GO:0006511: ubiquitin-dependent protein catabolic process1.15E-03
41GO:0009636: response to toxic substance1.19E-03
42GO:0009855: determination of bilateral symmetry1.20E-03
43GO:0001676: long-chain fatty acid metabolic process1.20E-03
44GO:0046836: glycolipid transport1.20E-03
45GO:0048194: Golgi vesicle budding1.20E-03
46GO:0007231: osmosensory signaling pathway1.20E-03
47GO:0046902: regulation of mitochondrial membrane permeability1.20E-03
48GO:0033014: tetrapyrrole biosynthetic process1.20E-03
49GO:0055114: oxidation-reduction process1.25E-03
50GO:0009411: response to UV1.44E-03
51GO:0009625: response to insect1.44E-03
52GO:0010224: response to UV-B1.56E-03
53GO:0010508: positive regulation of autophagy1.61E-03
54GO:0051205: protein insertion into membrane1.61E-03
55GO:0034440: lipid oxidation1.61E-03
56GO:1901141: regulation of lignin biosynthetic process1.61E-03
57GO:0045727: positive regulation of translation1.61E-03
58GO:0006536: glutamate metabolic process1.61E-03
59GO:0033500: carbohydrate homeostasis1.61E-03
60GO:0042273: ribosomal large subunit biogenesis1.61E-03
61GO:0010197: polar nucleus fusion1.97E-03
62GO:0031365: N-terminal protein amino acid modification2.05E-03
63GO:0006461: protein complex assembly2.05E-03
64GO:0009697: salicylic acid biosynthetic process2.05E-03
65GO:0009646: response to absence of light2.12E-03
66GO:0010200: response to chitin2.39E-03
67GO:0000302: response to reactive oxygen species2.43E-03
68GO:0009117: nucleotide metabolic process2.52E-03
69GO:0018258: protein O-linked glycosylation via hydroxyproline2.52E-03
70GO:0009228: thiamine biosynthetic process2.52E-03
71GO:0010405: arabinogalactan protein metabolic process2.52E-03
72GO:0016554: cytidine to uridine editing2.52E-03
73GO:0042742: defense response to bacterium2.53E-03
74GO:0030163: protein catabolic process2.77E-03
75GO:0009094: L-phenylalanine biosynthetic process3.03E-03
76GO:0009423: chorismate biosynthetic process3.03E-03
77GO:0080086: stamen filament development3.03E-03
78GO:0071470: cellular response to osmotic stress3.03E-03
79GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.03E-03
80GO:0006744: ubiquinone biosynthetic process3.58E-03
81GO:1900056: negative regulation of leaf senescence3.58E-03
82GO:0080186: developmental vegetative growth3.58E-03
83GO:0070370: cellular heat acclimation3.58E-03
84GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c3.58E-03
85GO:0006457: protein folding3.96E-03
86GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.15E-03
87GO:0009819: drought recovery4.15E-03
88GO:0050821: protein stabilization4.15E-03
89GO:0031540: regulation of anthocyanin biosynthetic process4.15E-03
90GO:0006102: isocitrate metabolic process4.15E-03
91GO:0010928: regulation of auxin mediated signaling pathway4.15E-03
92GO:0009409: response to cold4.60E-03
93GO:0006952: defense response4.61E-03
94GO:0010150: leaf senescence4.68E-03
95GO:0010497: plasmodesmata-mediated intercellular transport4.74E-03
96GO:0043562: cellular response to nitrogen levels4.74E-03
97GO:0017004: cytochrome complex assembly4.74E-03
98GO:0009699: phenylpropanoid biosynthetic process4.74E-03
99GO:0015996: chlorophyll catabolic process4.74E-03
100GO:0010043: response to zinc ion5.28E-03
101GO:0019432: triglyceride biosynthetic process5.37E-03
102GO:0006783: heme biosynthetic process5.37E-03
103GO:0006607: NLS-bearing protein import into nucleus5.37E-03
104GO:0046685: response to arsenic-containing substance5.37E-03
105GO:0006098: pentose-phosphate shunt5.37E-03
106GO:0045087: innate immune response5.79E-03
107GO:0048354: mucilage biosynthetic process involved in seed coat development6.03E-03
108GO:0043067: regulation of programmed cell death6.03E-03
109GO:0030042: actin filament depolymerization6.03E-03
110GO:2000280: regulation of root development6.03E-03
111GO:0009870: defense response signaling pathway, resistance gene-dependent6.71E-03
112GO:0006032: chitin catabolic process6.71E-03
113GO:0010162: seed dormancy process6.71E-03
114GO:0072593: reactive oxygen species metabolic process7.43E-03
115GO:0009682: induced systemic resistance7.43E-03
116GO:0009073: aromatic amino acid family biosynthetic process7.43E-03
117GO:0000272: polysaccharide catabolic process7.43E-03
118GO:0048229: gametophyte development7.43E-03
119GO:0016485: protein processing7.43E-03
120GO:0009698: phenylpropanoid metabolic process7.43E-03
121GO:0015706: nitrate transport8.17E-03
122GO:0006508: proteolysis8.27E-03
123GO:0006855: drug transmembrane transport8.71E-03
124GO:2000028: regulation of photoperiodism, flowering8.93E-03
125GO:0002237: response to molecule of bacterial origin9.72E-03
126GO:0034605: cellular response to heat9.72E-03
127GO:0006486: protein glycosylation1.01E-02
128GO:0009611: response to wounding1.01E-02
129GO:0046688: response to copper ion1.05E-02
130GO:0010167: response to nitrate1.05E-02
131GO:0009901: anther dehiscence1.05E-02
132GO:0042343: indole glucosinolate metabolic process1.05E-02
133GO:0080167: response to karrikin1.07E-02
134GO:0034976: response to endoplasmic reticulum stress1.14E-02
135GO:0000162: tryptophan biosynthetic process1.14E-02
136GO:0080147: root hair cell development1.22E-02
137GO:0000027: ribosomal large subunit assembly1.22E-02
138GO:0009863: salicylic acid mediated signaling pathway1.22E-02
139GO:0030150: protein import into mitochondrial matrix1.22E-02
140GO:2000377: regulation of reactive oxygen species metabolic process1.22E-02
141GO:0009944: polarity specification of adaxial/abaxial axis1.22E-02
142GO:0009626: plant-type hypersensitive response1.27E-02
143GO:0009695: jasmonic acid biosynthetic process1.31E-02
144GO:0006825: copper ion transport1.31E-02
145GO:0045454: cell redox homeostasis1.35E-02
146GO:0016998: cell wall macromolecule catabolic process1.40E-02
147GO:0098542: defense response to other organism1.40E-02
148GO:0006334: nucleosome assembly1.40E-02
149GO:0031408: oxylipin biosynthetic process1.40E-02
150GO:0009624: response to nematode1.44E-02
151GO:0031348: negative regulation of defense response1.50E-02
152GO:0009814: defense response, incompatible interaction1.50E-02
153GO:0016226: iron-sulfur cluster assembly1.50E-02
154GO:0009294: DNA mediated transformation1.59E-02
155GO:0040007: growth1.59E-02
156GO:0019722: calcium-mediated signaling1.69E-02
157GO:0009561: megagametogenesis1.69E-02
158GO:0010091: trichome branching1.69E-02
159GO:0070417: cellular response to cold1.79E-02
160GO:0042391: regulation of membrane potential1.89E-02
161GO:0006606: protein import into nucleus1.89E-02
162GO:0048653: anther development1.89E-02
163GO:0042631: cellular response to water deprivation1.89E-02
164GO:0008152: metabolic process1.99E-02
165GO:0009960: endosperm development1.99E-02
166GO:0006520: cellular amino acid metabolic process1.99E-02
167GO:0015986: ATP synthesis coupled proton transport2.10E-02
168GO:0009790: embryo development2.11E-02
169GO:0010183: pollen tube guidance2.20E-02
170GO:0006635: fatty acid beta-oxidation2.31E-02
171GO:0080156: mitochondrial mRNA modification2.31E-02
172GO:0032502: developmental process2.42E-02
173GO:0009414: response to water deprivation2.72E-02
174GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.79E-02
175GO:0001666: response to hypoxia3.01E-02
176GO:0009816: defense response to bacterium, incompatible interaction3.13E-02
177GO:0042128: nitrate assimilation3.25E-02
178GO:0015995: chlorophyll biosynthetic process3.38E-02
179GO:0009555: pollen development3.60E-02
180GO:0008219: cell death3.63E-02
181GO:0010119: regulation of stomatal movement4.03E-02
182GO:0009853: photorespiration4.30E-02
183GO:0006839: mitochondrial transport4.71E-02
184GO:0006631: fatty acid metabolic process4.85E-02
185GO:0006810: transport4.90E-02
RankGO TermAdjusted P value
1GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
2GO:0050220: prostaglandin-E synthase activity0.00E+00
3GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
4GO:0004107: chorismate synthase activity0.00E+00
5GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
6GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
7GO:0004298: threonine-type endopeptidase activity5.33E-08
8GO:0005507: copper ion binding1.19E-06
9GO:0004617: phosphoglycerate dehydrogenase activity2.56E-06
10GO:0008233: peptidase activity7.57E-06
11GO:0005516: calmodulin binding1.23E-05
12GO:0005388: calcium-transporting ATPase activity3.12E-05
13GO:0004345: glucose-6-phosphate dehydrogenase activity3.85E-05
14GO:0005524: ATP binding7.28E-05
15GO:0051287: NAD binding1.70E-04
16GO:0004048: anthranilate phosphoribosyltransferase activity2.34E-04
17GO:0004325: ferrochelatase activity2.34E-04
18GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity2.34E-04
19GO:0080042: ADP-glucose pyrophosphohydrolase activity2.34E-04
20GO:0008237: metallopeptidase activity3.40E-04
21GO:0016597: amino acid binding3.67E-04
22GO:0019172: glyoxalase III activity5.20E-04
23GO:0004775: succinate-CoA ligase (ADP-forming) activity5.20E-04
24GO:0004338: glucan exo-1,3-beta-glucosidase activity5.20E-04
25GO:0004385: guanylate kinase activity5.20E-04
26GO:0048531: beta-1,3-galactosyltransferase activity5.20E-04
27GO:0004776: succinate-CoA ligase (GDP-forming) activity5.20E-04
28GO:0004634: phosphopyruvate hydratase activity5.20E-04
29GO:0080041: ADP-ribose pyrophosphohydrolase activity5.20E-04
30GO:0003958: NADPH-hemoprotein reductase activity5.20E-04
31GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity5.20E-04
32GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity5.20E-04
33GO:0017110: nucleoside-diphosphatase activity5.20E-04
34GO:0000774: adenyl-nucleotide exchange factor activity5.20E-04
35GO:0050897: cobalt ion binding6.69E-04
36GO:0004190: aspartic-type endopeptidase activity8.23E-04
37GO:0004148: dihydrolipoyl dehydrogenase activity8.44E-04
38GO:0016165: linoleate 13S-lipoxygenase activity8.44E-04
39GO:0016531: copper chaperone activity8.44E-04
40GO:0016174: NAD(P)H oxidase activity8.44E-04
41GO:0004364: glutathione transferase activity9.79E-04
42GO:0004108: citrate (Si)-synthase activity1.20E-03
43GO:0010178: IAA-amino acid conjugate hydrolase activity1.20E-03
44GO:0004449: isocitrate dehydrogenase (NAD+) activity1.20E-03
45GO:0004351: glutamate decarboxylase activity1.20E-03
46GO:0017089: glycolipid transporter activity1.20E-03
47GO:0005515: protein binding1.57E-03
48GO:0047769: arogenate dehydratase activity1.61E-03
49GO:0004664: prephenate dehydratase activity1.61E-03
50GO:0051861: glycolipid binding1.61E-03
51GO:0047631: ADP-ribose diphosphatase activity2.05E-03
52GO:0005471: ATP:ADP antiporter activity2.05E-03
53GO:0010181: FMN binding2.12E-03
54GO:0051082: unfolded protein binding2.33E-03
55GO:0000210: NAD+ diphosphatase activity2.52E-03
56GO:0004029: aldehyde dehydrogenase (NAD) activity2.52E-03
57GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity2.52E-03
58GO:0008200: ion channel inhibitor activity2.52E-03
59GO:0030976: thiamine pyrophosphate binding2.52E-03
60GO:1990714: hydroxyproline O-galactosyltransferase activity2.52E-03
61GO:0016758: transferase activity, transferring hexosyl groups3.00E-03
62GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity3.03E-03
63GO:0102391: decanoate--CoA ligase activity3.03E-03
64GO:0004012: phospholipid-translocating ATPase activity3.03E-03
65GO:0004144: diacylglycerol O-acyltransferase activity3.03E-03
66GO:0004656: procollagen-proline 4-dioxygenase activity3.03E-03
67GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.35E-03
68GO:0043295: glutathione binding3.58E-03
69GO:0004467: long-chain fatty acid-CoA ligase activity3.58E-03
70GO:0016831: carboxy-lyase activity3.58E-03
71GO:0008235: metalloexopeptidase activity3.58E-03
72GO:0008121: ubiquinol-cytochrome-c reductase activity3.58E-03
73GO:0009055: electron carrier activity4.56E-03
74GO:0008135: translation factor activity, RNA binding4.74E-03
75GO:0015238: drug transmembrane transporter activity4.80E-03
76GO:0004222: metalloendopeptidase activity5.04E-03
77GO:0003746: translation elongation factor activity5.79E-03
78GO:0015112: nitrate transmembrane transporter activity6.03E-03
79GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity6.03E-03
80GO:0050661: NADP binding6.60E-03
81GO:0004568: chitinase activity6.71E-03
82GO:0015020: glucuronosyltransferase activity6.71E-03
83GO:0004129: cytochrome-c oxidase activity7.43E-03
84GO:0004177: aminopeptidase activity7.43E-03
85GO:0005509: calcium ion binding7.51E-03
86GO:0000287: magnesium ion binding7.96E-03
87GO:0051537: 2 iron, 2 sulfur cluster binding8.08E-03
88GO:0008378: galactosyltransferase activity8.17E-03
89GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism8.93E-03
90GO:0008139: nuclear localization sequence binding8.93E-03
91GO:0005262: calcium channel activity8.93E-03
92GO:0015114: phosphate ion transmembrane transporter activity8.93E-03
93GO:0042973: glucan endo-1,3-beta-D-glucosidase activity9.72E-03
94GO:0008266: poly(U) RNA binding9.72E-03
95GO:0004175: endopeptidase activity9.72E-03
96GO:0005215: transporter activity1.03E-02
97GO:0003712: transcription cofactor activity1.05E-02
98GO:0030552: cAMP binding1.05E-02
99GO:0004867: serine-type endopeptidase inhibitor activity1.05E-02
100GO:0030553: cGMP binding1.05E-02
101GO:0008061: chitin binding1.05E-02
102GO:0004407: histone deacetylase activity1.22E-02
103GO:0005528: FK506 binding1.22E-02
104GO:0080043: quercetin 3-O-glucosyltransferase activity1.31E-02
105GO:0051087: chaperone binding1.31E-02
106GO:0080044: quercetin 7-O-glucosyltransferase activity1.31E-02
107GO:0005216: ion channel activity1.31E-02
108GO:0004540: ribonuclease activity1.40E-02
109GO:0008810: cellulase activity1.59E-02
110GO:0019825: oxygen binding1.67E-02
111GO:0003756: protein disulfide isomerase activity1.69E-02
112GO:0005249: voltage-gated potassium channel activity1.89E-02
113GO:0030551: cyclic nucleotide binding1.89E-02
114GO:0020037: heme binding1.90E-02
115GO:0046872: metal ion binding1.95E-02
116GO:0046933: proton-transporting ATP synthase activity, rotational mechanism1.99E-02
117GO:0030170: pyridoxal phosphate binding2.00E-02
118GO:0015297: antiporter activity2.38E-02
119GO:0005506: iron ion binding2.75E-02
120GO:0008194: UDP-glycosyltransferase activity2.79E-02
121GO:0009931: calcium-dependent protein serine/threonine kinase activity3.25E-02
122GO:0030247: polysaccharide binding3.38E-02
123GO:0004683: calmodulin-dependent protein kinase activity3.38E-02
124GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity3.63E-02
125GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.03E-02
126GO:0030145: manganese ion binding4.03E-02
127GO:0003697: single-stranded DNA binding4.30E-02
128GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.30E-02
129GO:0050660: flavin adenine dinucleotide binding4.44E-02
130GO:0042393: histone binding4.71E-02
131GO:0004497: monooxygenase activity4.76E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
3GO:0005839: proteasome core complex5.33E-08
4GO:0019773: proteasome core complex, alpha-subunit complex6.23E-08
5GO:0005886: plasma membrane1.78E-07
6GO:0005773: vacuole4.75E-07
7GO:0000502: proteasome complex9.04E-07
8GO:0005829: cytosol4.78E-06
9GO:0009507: chloroplast6.23E-06
10GO:0005759: mitochondrial matrix1.01E-05
11GO:0005740: mitochondrial envelope1.54E-05
12GO:0005739: mitochondrion2.19E-05
13GO:0005774: vacuolar membrane3.57E-05
14GO:0005746: mitochondrial respiratory chain6.16E-05
15GO:0005758: mitochondrial intermembrane space6.42E-05
16GO:0005730: nucleolus2.00E-04
17GO:0005618: cell wall2.29E-04
18GO:0001405: presequence translocase-associated import motor2.34E-04
19GO:0005783: endoplasmic reticulum4.97E-04
20GO:0000015: phosphopyruvate hydratase complex5.20E-04
21GO:0005901: caveola5.20E-04
22GO:0005741: mitochondrial outer membrane1.21E-03
23GO:0030660: Golgi-associated vesicle membrane1.61E-03
24GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane1.61E-03
25GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)1.61E-03
26GO:0005747: mitochondrial respiratory chain complex I1.92E-03
27GO:0005743: mitochondrial inner membrane3.67E-03
28GO:0005788: endoplasmic reticulum lumen3.71E-03
29GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane4.15E-03
30GO:0048046: apoplast4.38E-03
31GO:0000326: protein storage vacuole4.74E-03
32GO:0016020: membrane5.32E-03
33GO:0005887: integral component of plasma membrane6.52E-03
34GO:0008541: proteasome regulatory particle, lid subcomplex7.43E-03
35GO:0005765: lysosomal membrane7.43E-03
36GO:0031012: extracellular matrix8.93E-03
37GO:0022626: cytosolic ribosome9.16E-03
38GO:0005750: mitochondrial respiratory chain complex III9.72E-03
39GO:0030176: integral component of endoplasmic reticulum membrane1.05E-02
40GO:0005753: mitochondrial proton-transporting ATP synthase complex1.05E-02
41GO:0009536: plastid1.23E-02
42GO:0045271: respiratory chain complex I1.31E-02
43GO:0070469: respiratory chain1.31E-02
44GO:0015629: actin cytoskeleton1.59E-02
45GO:0043231: intracellular membrane-bounded organelle1.99E-02
46GO:0046658: anchored component of plasma membrane3.30E-02
47GO:0005643: nuclear pore3.63E-02
48GO:0009505: plant-type cell wall3.91E-02
49GO:0009570: chloroplast stroma3.98E-02
50GO:0015934: large ribosomal subunit4.03E-02
51GO:0005819: spindle4.57E-02
52GO:0031969: chloroplast membrane4.76E-02
Gene type



Gene DE type