co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G09390

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2000505: regulation of energy homeostasis	0.00E+00
2	GO:0045014: negative regulation of transcription by glucose	0.00E+00
3	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
4	GO:0033231: carbohydrate export	0.00E+00
5	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
6	GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process	0.00E+00
7	GO:0090627: plant epidermal cell differentiation	0.00E+00
8	GO:0010305: leaf vascular tissue pattern formation	1.77E-05
9	GO:0015995: chlorophyll biosynthetic process	5.85E-05
10	GO:0043007: maintenance of rDNA	7.75E-05
11	GO:1902334: fructose export from vacuole to cytoplasm	7.75E-05
12	GO:0015755: fructose transport	7.75E-05
13	GO:0010588: cotyledon vascular tissue pattern formation	1.40E-04
14	GO:0006898: receptor-mediated endocytosis	1.85E-04
15	GO:0051260: protein homooligomerization	2.78E-04
16	GO:0016045: detection of bacterium	3.11E-04
17	GO:0010359: regulation of anion channel activity	3.11E-04
18	GO:0080022: primary root development	4.24E-04
19	GO:0010087: phloem or xylem histogenesis	4.24E-04
20	GO:0007275: multicellular organism development	4.47E-04
21	GO:0051513: regulation of monopolar cell growth	4.49E-04
22	GO:0051639: actin filament network formation	4.49E-04
23	GO:0080170: hydrogen peroxide transmembrane transport	4.49E-04
24	GO:0009741: response to brassinosteroid	4.57E-04
25	GO:0048825: cotyledon development	5.25E-04
26	GO:0051764: actin crosslink formation	5.98E-04
27	GO:0030007: cellular potassium ion homeostasis	5.98E-04
28	GO:0030104: water homeostasis	5.98E-04
29	GO:0010252: auxin homeostasis	6.75E-04
30	GO:0071805: potassium ion transmembrane transport	7.15E-04
31	GO:0009823: cytokinin catabolic process	7.57E-04
32	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	9.24E-04
33	GO:0009228: thiamine biosynthetic process	9.24E-04
34	GO:0009913: epidermal cell differentiation	9.24E-04
35	GO:0009942: longitudinal axis specification	1.10E-03
36	GO:0050829: defense response to Gram-negative bacterium	1.29E-03
37	GO:0009642: response to light intensity	1.48E-03
38	GO:0046620: regulation of organ growth	1.48E-03
39	GO:0009690: cytokinin metabolic process	1.48E-03
40	GO:0010078: maintenance of root meristem identity	1.48E-03
41	GO:0009926: auxin polar transport	1.65E-03
42	GO:0009640: photomorphogenesis	1.65E-03
43	GO:0043562: cellular response to nitrogen levels	1.69E-03
44	GO:0009657: plastid organization	1.69E-03
45	GO:0007389: pattern specification process	1.69E-03
46	GO:0048507: meristem development	1.91E-03
47	GO:0010206: photosystem II repair	1.91E-03
48	GO:0034765: regulation of ion transmembrane transport	1.91E-03
49	GO:0048589: developmental growth	1.91E-03
50	GO:0006995: cellular response to nitrogen starvation	2.37E-03
51	GO:0009684: indoleacetic acid biosynthetic process	2.61E-03
52	GO:0046856: phosphatidylinositol dephosphorylation	2.61E-03
53	GO:0009698: phenylpropanoid metabolic process	2.61E-03
54	GO:0009773: photosynthetic electron transport in photosystem I	2.61E-03
55	GO:0052544: defense response by callose deposition in cell wall	2.61E-03
56	GO:0043085: positive regulation of catalytic activity	2.61E-03
57	GO:1903507: negative regulation of nucleic acid-templated transcription	2.61E-03
58	GO:0009750: response to fructose	2.61E-03
59	GO:0048367: shoot system development	2.69E-03
60	GO:0010152: pollen maturation	2.86E-03
61	GO:0016925: protein sumoylation	2.86E-03
62	GO:0009733: response to auxin	3.30E-03
63	GO:0048467: gynoecium development	3.38E-03
64	GO:0010207: photosystem II assembly	3.38E-03
65	GO:0010030: positive regulation of seed germination	3.66E-03
66	GO:0009734: auxin-activated signaling pathway	3.88E-03
67	GO:0006636: unsaturated fatty acid biosynthetic process	3.94E-03
68	GO:0009944: polarity specification of adaxial/abaxial axis	4.23E-03
69	GO:0051017: actin filament bundle assembly	4.23E-03
70	GO:2000377: regulation of reactive oxygen species metabolic process	4.23E-03
71	GO:0007017: microtubule-based process	4.52E-03
72	GO:0016114: terpenoid biosynthetic process	4.82E-03
73	GO:0040008: regulation of growth	5.13E-03
74	GO:2000022: regulation of jasmonic acid mediated signaling pathway	5.13E-03
75	GO:0007623: circadian rhythm	5.37E-03
76	GO:0048443: stamen development	5.77E-03
77	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	6.10E-03
78	GO:0070417: cellular response to cold	6.10E-03
79	GO:0042631: cellular response to water deprivation	6.44E-03
80	GO:0034220: ion transmembrane transport	6.44E-03
81	GO:0071472: cellular response to salt stress	6.78E-03
82	GO:0009958: positive gravitropism	6.78E-03
83	GO:0006662: glycerol ether metabolic process	6.78E-03
84	GO:0009646: response to absence of light	7.13E-03
85	GO:0009851: auxin biosynthetic process	7.49E-03
86	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	7.85E-03
87	GO:0010193: response to ozone	7.85E-03
88	GO:0010583: response to cyclopentenone	8.22E-03
89	GO:0016032: viral process	8.22E-03
90	GO:0010029: regulation of seed germination	1.06E-02
91	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.07E-02
92	GO:0045454: cell redox homeostasis	1.23E-02
93	GO:0000160: phosphorelay signal transduction system	1.27E-02
94	GO:0042742: defense response to bacterium	1.27E-02
95	GO:0007568: aging	1.36E-02
96	GO:0009910: negative regulation of flower development	1.36E-02
97	GO:0009631: cold acclimation	1.36E-02
98	GO:0048527: lateral root development	1.36E-02
99	GO:0010119: regulation of stomatal movement	1.36E-02
100	GO:0032259: methylation	1.46E-02
101	GO:0034599: cellular response to oxidative stress	1.49E-02
102	GO:0006629: lipid metabolic process	1.52E-02
103	GO:0048364: root development	1.59E-02
104	GO:0010114: response to red light	1.73E-02
105	GO:0031347: regulation of defense response	1.98E-02
106	GO:0009664: plant-type cell wall organization	2.04E-02
107	GO:0006364: rRNA processing	2.14E-02
108	GO:0009585: red, far-red light phototransduction	2.14E-02
109	GO:0006813: potassium ion transport	2.14E-02
110	GO:0009736: cytokinin-activated signaling pathway	2.14E-02
111	GO:0010224: response to UV-B	2.19E-02
112	GO:0006417: regulation of translation	2.30E-02
113	GO:0009908: flower development	2.45E-02
114	GO:0009740: gibberellic acid mediated signaling pathway	2.64E-02
115	GO:0042545: cell wall modification	2.69E-02
116	GO:0009611: response to wounding	2.77E-02
117	GO:0006396: RNA processing	2.81E-02
118	GO:0009742: brassinosteroid mediated signaling pathway	2.87E-02
119	GO:0009845: seed germination	3.42E-02
120	GO:0009790: embryo development	3.61E-02
121	GO:0009793: embryo development ending in seed dormancy	3.64E-02
122	GO:0006633: fatty acid biosynthetic process	3.80E-02
123	GO:0045490: pectin catabolic process	4.06E-02
124	GO:0007166: cell surface receptor signaling pathway	4.47E-02

Rank	GO Term	Adjusted P value
1	GO:0015284: fructose uniporter activity	0.00E+00
2	GO:0046406: magnesium protoporphyrin IX methyltransferase activity	0.00E+00
3	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
4	GO:0103007: indole-3-acetate carboxyl methyltransferase activity	0.00E+00
5	GO:0015269: calcium-activated potassium channel activity	0.00E+00
6	GO:0051749: indole acetic acid carboxyl methyltransferase activity	0.00E+00
7	GO:0016868: intramolecular transferase activity, phosphotransferases	1.85E-04
8	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	1.85E-04
9	GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity	1.85E-04
10	GO:0004312: fatty acid synthase activity	1.85E-04
11	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	1.85E-04
12	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	1.85E-04
13	GO:0005353: fructose transmembrane transporter activity	1.85E-04
14	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	3.11E-04
15	GO:0004180: carboxypeptidase activity	3.11E-04
16	GO:0090729: toxin activity	3.11E-04
17	GO:0016805: dipeptidase activity	3.11E-04
18	GO:0019789: SUMO transferase activity	4.49E-04
19	GO:0010011: auxin binding	5.98E-04
20	GO:0016846: carbon-sulfur lyase activity	7.57E-04
21	GO:0019139: cytokinin dehydrogenase activity	7.57E-04
22	GO:0015271: outward rectifier potassium channel activity	9.24E-04
23	GO:0042578: phosphoric ester hydrolase activity	9.24E-04
24	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	9.24E-04
25	GO:0004017: adenylate kinase activity	1.10E-03
26	GO:0005267: potassium channel activity	1.69E-03
27	GO:0009672: auxin:proton symporter activity	2.14E-03
28	GO:0016787: hydrolase activity	2.19E-03
29	GO:0008047: enzyme activator activity	2.37E-03
30	GO:0047372: acylglycerol lipase activity	2.61E-03
31	GO:0008794: arsenate reductase (glutaredoxin) activity	2.61E-03
32	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	2.86E-03
33	GO:0031072: heat shock protein binding	3.12E-03
34	GO:0010329: auxin efflux transmembrane transporter activity	3.12E-03
35	GO:0015035: protein disulfide oxidoreductase activity	3.22E-03
36	GO:0008131: primary amine oxidase activity	3.38E-03
37	GO:0051119: sugar transmembrane transporter activity	3.66E-03
38	GO:0008289: lipid binding	3.82E-03
39	GO:0003714: transcription corepressor activity	4.23E-03
40	GO:0005216: ion channel activity	4.52E-03
41	GO:0015079: potassium ion transmembrane transporter activity	4.52E-03
42	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	5.01E-03
43	GO:0003756: protein disulfide isomerase activity	5.77E-03
44	GO:0003727: single-stranded RNA binding	5.77E-03
45	GO:0047134: protein-disulfide reductase activity	6.10E-03
46	GO:0004791: thioredoxin-disulfide reductase activity	7.13E-03
47	GO:0005515: protein binding	8.51E-03
48	GO:0051015: actin filament binding	8.59E-03
49	GO:0000156: phosphorelay response regulator activity	8.59E-03
50	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	8.59E-03
51	GO:0005200: structural constituent of cytoskeleton	9.36E-03
52	GO:0015250: water channel activity	1.02E-02
53	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.18E-02
54	GO:0005096: GTPase activator activity	1.27E-02
55	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.36E-02
56	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.54E-02
57	GO:0004185: serine-type carboxypeptidase activity	1.73E-02
58	GO:0051537: 2 iron, 2 sulfur cluster binding	1.83E-02
59	GO:0043621: protein self-association	1.83E-02
60	GO:0016298: lipase activity	2.19E-02
61	GO:0003777: microtubule motor activity	2.30E-02
62	GO:0045330: aspartyl esterase activity	2.30E-02
63	GO:0016874: ligase activity	2.64E-02
64	GO:0030599: pectinesterase activity	2.64E-02
65	GO:0003779: actin binding	2.69E-02
66	GO:0051082: unfolded protein binding	2.75E-02
67	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.29E-02
68	GO:0046910: pectinesterase inhibitor activity	3.86E-02
69	GO:0003743: translation initiation factor activity	4.53E-02
70	GO:0042802: identical protein binding	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0009534: chloroplast thylakoid	2.19E-06
3	GO:0009507: chloroplast	2.12E-05
4	GO:0043674: columella	7.75E-05
5	GO:0009570: chloroplast stroma	1.02E-04
6	GO:0009535: chloroplast thylakoid membrane	1.20E-04
7	GO:0030093: chloroplast photosystem I	1.85E-04
8	GO:0009531: secondary cell wall	4.49E-04
9	GO:0032432: actin filament bundle	4.49E-04
10	GO:0009543: chloroplast thylakoid lumen	4.59E-04
11	GO:0042807: central vacuole	1.29E-03
12	GO:0031969: chloroplast membrane	1.54E-03
13	GO:0045298: tubulin complex	1.91E-03
14	GO:0009941: chloroplast envelope	2.51E-03
15	GO:0005884: actin filament	2.61E-03
16	GO:0016602: CCAAT-binding factor complex	3.12E-03
17	GO:0009508: plastid chromosome	3.12E-03
18	GO:0030095: chloroplast photosystem II	3.38E-03
19	GO:0005623: cell	4.00E-03
20	GO:0009705: plant-type vacuole membrane	5.37E-03
21	GO:0071944: cell periphery	8.59E-03
22	GO:0009295: nucleoid	9.36E-03
23	GO:0005886: plasma membrane	1.14E-02
24	GO:0016021: integral component of membrane	1.43E-02
25	GO:0031977: thylakoid lumen	1.64E-02
26	GO:0005774: vacuolar membrane	1.81E-02
27	GO:0010008: endosome membrane	2.47E-02
28	GO:0009706: chloroplast inner membrane	2.75E-02
29	GO:0009579: thylakoid	3.24E-02
30	GO:0005615: extracellular space	4.40E-02
31	GO:0005622: intracellular	4.79E-02