Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G09200

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046080: dUTP metabolic process0.00E+00
2GO:1901671: positive regulation of superoxide dismutase activity0.00E+00
3GO:0016048: detection of temperature stimulus0.00E+00
4GO:0031508: pericentric heterochromatin assembly0.00E+00
5GO:0080094: response to trehalose-6-phosphate0.00E+00
6GO:0009394: 2'-deoxyribonucleotide metabolic process0.00E+00
7GO:0006226: dUMP biosynthetic process0.00E+00
8GO:0051290: protein heterotetramerization0.00E+00
9GO:0010424: DNA methylation on cytosine within a CG sequence6.71E-08
10GO:0006342: chromatin silencing2.38E-06
11GO:0042026: protein refolding4.83E-06
12GO:0006458: 'de novo' protein folding4.83E-06
13GO:0044030: regulation of DNA methylation1.17E-05
14GO:0010216: maintenance of DNA methylation2.68E-05
15GO:0006169: adenosine salvage3.12E-05
16GO:0006260: DNA replication3.21E-05
17GO:0071158: positive regulation of cell cycle arrest7.88E-05
18GO:0010069: zygote asymmetric cytokinesis in embryo sac7.88E-05
19GO:0090309: positive regulation of methylation-dependent chromatin silencing7.88E-05
20GO:0006269: DNA replication, synthesis of RNA primer7.88E-05
21GO:0045717: negative regulation of fatty acid biosynthetic process7.88E-05
22GO:0009662: etioplast organization7.88E-05
23GO:0061077: chaperone-mediated protein folding7.90E-05
24GO:0007005: mitochondrion organization8.76E-05
25GO:0032776: DNA methylation on cytosine1.37E-04
26GO:0035066: positive regulation of histone acetylation1.37E-04
27GO:0042276: error-prone translesion synthesis1.37E-04
28GO:0070828: heterochromatin organization1.37E-04
29GO:0000727: double-strand break repair via break-induced replication1.37E-04
30GO:0006275: regulation of DNA replication1.37E-04
31GO:0051085: chaperone mediated protein folding requiring cofactor2.04E-04
32GO:0035067: negative regulation of histone acetylation2.04E-04
33GO:0006986: response to unfolded protein2.04E-04
34GO:0044209: AMP salvage3.53E-04
35GO:0000741: karyogamy4.34E-04
36GO:0006796: phosphate-containing compound metabolic process4.34E-04
37GO:0042793: transcription from plastid promoter4.34E-04
38GO:0006281: DNA repair5.78E-04
39GO:0052543: callose deposition in cell wall6.99E-04
40GO:0000105: histidine biosynthetic process6.99E-04
41GO:0006002: fructose 6-phosphate metabolic process7.94E-04
42GO:0048589: developmental growth8.92E-04
43GO:0046686: response to cadmium ion8.95E-04
44GO:0016569: covalent chromatin modification9.46E-04
45GO:0006349: regulation of gene expression by genetic imprinting9.92E-04
46GO:0006325: chromatin organization1.10E-03
47GO:0051301: cell division1.30E-03
48GO:0009934: regulation of meristem structural organization1.55E-03
49GO:0006270: DNA replication initiation1.55E-03
50GO:0007010: cytoskeleton organization1.92E-03
51GO:0010468: regulation of gene expression2.01E-03
52GO:0006334: nucleosome assembly2.19E-03
53GO:0009294: DNA mediated transformation2.46E-03
54GO:0009411: response to UV2.46E-03
55GO:0009658: chloroplast organization2.59E-03
56GO:0042127: regulation of cell proliferation2.61E-03
57GO:0010197: polar nucleus fusion3.05E-03
58GO:0007059: chromosome segregation3.20E-03
59GO:0010583: response to cyclopentenone3.68E-03
60GO:0016032: viral process3.68E-03
61GO:0006310: DNA recombination4.00E-03
62GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.69E-03
63GO:0048767: root hair elongation5.60E-03
64GO:0009910: negative regulation of flower development5.99E-03
65GO:0009909: regulation of flower development1.01E-02
66GO:0006096: glycolytic process1.05E-02
67GO:0051726: regulation of cell cycle1.25E-02
68GO:0009790: embryo development1.57E-02
69GO:0042742: defense response to bacterium1.69E-02
70GO:0045944: positive regulation of transcription from RNA polymerase II promoter2.28E-02
71GO:0006970: response to osmotic stress2.54E-02
72GO:0007049: cell cycle2.61E-02
73GO:0048366: leaf development2.71E-02
74GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.88E-02
75GO:0015979: photosynthesis3.09E-02
76GO:0045892: negative regulation of transcription, DNA-templated3.23E-02
RankGO TermAdjusted P value
1GO:0004635: phosphoribosyl-AMP cyclohydrolase activity0.00E+00
2GO:0004170: dUTP diphosphatase activity0.00E+00
3GO:0004636: phosphoribosyl-ATP diphosphatase activity0.00E+00
4GO:0003677: DNA binding2.01E-09
5GO:0046982: protein heterodimerization activity4.81E-07
6GO:0044183: protein binding involved in protein folding2.68E-05
7GO:0030337: DNA polymerase processivity factor activity3.12E-05
8GO:0004001: adenosine kinase activity3.12E-05
9GO:0051082: unfolded protein binding6.55E-05
10GO:0003896: DNA primase activity7.88E-05
11GO:0010428: methyl-CpNpG binding1.37E-04
12GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity1.37E-04
13GO:0010429: methyl-CpNpN binding1.37E-04
14GO:0001872: (1->3)-beta-D-glucan binding2.04E-04
15GO:0005507: copper ion binding2.63E-04
16GO:0010385: double-stranded methylated DNA binding2.76E-04
17GO:0003682: chromatin binding2.86E-04
18GO:0004784: superoxide dismutase activity4.34E-04
19GO:0016462: pyrophosphatase activity4.34E-04
20GO:0042393: histone binding4.78E-04
21GO:0003886: DNA (cytosine-5-)-methyltransferase activity5.20E-04
22GO:0043138: 3'-5' DNA helicase activity5.20E-04
23GO:0004427: inorganic diphosphatase activity6.07E-04
24GO:0003872: 6-phosphofructokinase activity6.07E-04
25GO:0008327: methyl-CpG binding1.20E-03
26GO:0051087: chaperone binding2.05E-03
27GO:0000287: magnesium ion binding2.54E-03
28GO:0003713: transcription coactivator activity3.05E-03
29GO:0016722: oxidoreductase activity, oxidizing metal ions4.17E-03
30GO:0005200: structural constituent of cytoskeleton4.17E-03
31GO:0030247: polysaccharide binding5.05E-03
32GO:0004693: cyclin-dependent protein serine/threonine kinase activity5.79E-03
33GO:0003697: single-stranded DNA binding6.38E-03
34GO:0005524: ATP binding9.54E-03
35GO:0004386: helicase activity1.27E-02
36GO:0008017: microtubule binding1.82E-02
37GO:0005515: protein binding1.86E-02
38GO:0042802: identical protein binding2.09E-02
39GO:0008168: methyltransferase activity2.34E-02
40GO:0004842: ubiquitin-protein transferase activity2.34E-02
41GO:0061630: ubiquitin protein ligase activity2.91E-02
RankGO TermAdjusted P value
1GO:0000940: condensed chromosome outer kinetochore0.00E+00
2GO:0000788: nuclear nucleosome0.00E+00
3GO:0005721: pericentric heterochromatin0.00E+00
4GO:0000786: nucleosome2.12E-11
5GO:0000790: nuclear chromatin1.81E-06
6GO:0042644: chloroplast nucleoid1.48E-05
7GO:0009579: thylakoid1.61E-05
8GO:0031436: BRCA1-BARD1 complex3.12E-05
9GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex3.12E-05
10GO:0000792: heterochromatin7.88E-05
11GO:0070531: BRCA1-A complex1.37E-04
12GO:0000811: GINS complex1.37E-04
13GO:0005658: alpha DNA polymerase:primase complex1.37E-04
14GO:0005730: nucleolus1.63E-04
15GO:0009295: nucleoid2.25E-04
16GO:0031298: replication fork protection complex2.76E-04
17GO:0010369: chromocenter5.20E-04
18GO:0005634: nucleus5.67E-04
19GO:0005720: nuclear heterochromatin8.92E-04
20GO:0005876: spindle microtubule9.92E-04
21GO:0009941: chloroplast envelope1.06E-03
22GO:0022626: cytosolic ribosome1.11E-03
23GO:0009506: plasmodesma1.76E-03
24GO:0009570: chloroplast stroma1.89E-03
25GO:0046658: anchored component of plasma membrane2.22E-03
26GO:0048046: apoplast3.21E-03
27GO:0009536: plastid3.67E-03
28GO:0005856: cytoskeleton8.24E-03
29GO:0031225: anchored component of membrane1.30E-02
30GO:0005618: cell wall1.63E-02
31GO:0005759: mitochondrial matrix1.65E-02
32GO:0009505: plant-type cell wall2.12E-02
Gene type



Gene DE type