co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G09080

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042362: fat-soluble vitamin biosynthetic process	0.00E+00
2	GO:0006793: phosphorus metabolic process	0.00E+00
3	GO:0072722: response to amitrole	0.00E+00
4	GO:0006468: protein phosphorylation	4.43E-06
5	GO:0006032: chitin catabolic process	9.75E-06
6	GO:0009617: response to bacterium	9.97E-06
7	GO:0019375: galactolipid biosynthetic process	1.56E-04
8	GO:0010193: response to ozone	1.65E-04
9	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.93E-04
10	GO:0034975: protein folding in endoplasmic reticulum	1.93E-04
11	GO:0060627: regulation of vesicle-mediated transport	1.93E-04
12	GO:0015760: glucose-6-phosphate transport	1.93E-04
13	GO:1990641: response to iron ion starvation	1.93E-04
14	GO:0042742: defense response to bacterium	3.84E-04
15	GO:0000272: polysaccharide catabolic process	3.85E-04
16	GO:0009866: induced systemic resistance, ethylene mediated signaling pathway	4.33E-04
17	GO:0009915: phloem sucrose loading	4.33E-04
18	GO:0080040: positive regulation of cellular response to phosphate starvation	4.33E-04
19	GO:0019374: galactolipid metabolic process	4.33E-04
20	GO:0044419: interspecies interaction between organisms	4.33E-04
21	GO:0031349: positive regulation of defense response	4.33E-04
22	GO:0010163: high-affinity potassium ion import	4.33E-04
23	GO:0015712: hexose phosphate transport	4.33E-04
24	GO:0006101: citrate metabolic process	4.33E-04
25	GO:0060919: auxin influx	4.33E-04
26	GO:0097054: L-glutamate biosynthetic process	4.33E-04
27	GO:0002221: pattern recognition receptor signaling pathway	4.33E-04
28	GO:0051592: response to calcium ion	4.33E-04
29	GO:0009737: response to abscisic acid	6.27E-04
30	GO:0007166: cell surface receptor signaling pathway	6.83E-04
31	GO:0042542: response to hydrogen peroxide	6.97E-04
32	GO:0015714: phosphoenolpyruvate transport	7.06E-04
33	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	7.06E-04
34	GO:1900140: regulation of seedling development	7.06E-04
35	GO:0035436: triose phosphate transmembrane transport	7.06E-04
36	GO:0010351: lithium ion transport	7.06E-04
37	GO:0010476: gibberellin mediated signaling pathway	7.06E-04
38	GO:0010325: raffinose family oligosaccharide biosynthetic process	7.06E-04
39	GO:0010272: response to silver ion	7.06E-04
40	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	7.06E-04
41	GO:0031347: regulation of defense response	9.29E-04
42	GO:0016998: cell wall macromolecule catabolic process	9.35E-04
43	GO:0006537: glutamate biosynthetic process	1.01E-03
44	GO:0006882: cellular zinc ion homeostasis	1.01E-03
45	GO:0001676: long-chain fatty acid metabolic process	1.01E-03
46	GO:0046836: glycolipid transport	1.01E-03
47	GO:0019438: aromatic compound biosynthetic process	1.01E-03
48	GO:0071456: cellular response to hypoxia	1.02E-03
49	GO:0006536: glutamate metabolic process	1.34E-03
50	GO:0010107: potassium ion import	1.34E-03
51	GO:0015713: phosphoglycerate transport	1.34E-03
52	GO:0080142: regulation of salicylic acid biosynthetic process	1.34E-03
53	GO:0010109: regulation of photosynthesis	1.34E-03
54	GO:0019676: ammonia assimilation cycle	1.34E-03
55	GO:0060548: negative regulation of cell death	1.34E-03
56	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	1.34E-03
57	GO:0006979: response to oxidative stress	1.48E-03
58	GO:0009624: response to nematode	1.65E-03
59	GO:0009247: glycolipid biosynthetic process	1.70E-03
60	GO:0034052: positive regulation of plant-type hypersensitive response	1.70E-03
61	GO:0000304: response to singlet oxygen	1.70E-03
62	GO:0045487: gibberellin catabolic process	1.70E-03
63	GO:0006097: glyoxylate cycle	1.70E-03
64	GO:0010225: response to UV-C	1.70E-03
65	GO:0009749: response to glucose	1.73E-03
66	GO:0009651: response to salt stress	1.85E-03
67	GO:0010315: auxin efflux	2.10E-03
68	GO:0009643: photosynthetic acclimation	2.10E-03
69	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.52E-03
70	GO:0010189: vitamin E biosynthetic process	2.52E-03
71	GO:0048444: floral organ morphogenesis	2.52E-03
72	GO:0010555: response to mannitol	2.52E-03
73	GO:2000067: regulation of root morphogenesis	2.52E-03
74	GO:0050829: defense response to Gram-negative bacterium	2.96E-03
75	GO:0030026: cellular manganese ion homeostasis	2.96E-03
76	GO:0009395: phospholipid catabolic process	2.96E-03
77	GO:0043090: amino acid import	2.96E-03
78	GO:0009627: systemic acquired resistance	2.98E-03
79	GO:0016036: cellular response to phosphate starvation	3.01E-03
80	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.43E-03
81	GO:0048658: anther wall tapetum development	3.43E-03
82	GO:0006102: isocitrate metabolic process	3.43E-03
83	GO:0008219: cell death	3.47E-03
84	GO:0009407: toxin catabolic process	3.83E-03
85	GO:0007186: G-protein coupled receptor signaling pathway	3.93E-03
86	GO:0010262: somatic embryogenesis	3.93E-03
87	GO:0080144: amino acid homeostasis	4.44E-03
88	GO:0034765: regulation of ion transmembrane transport	4.44E-03
89	GO:0010112: regulation of systemic acquired resistance	4.44E-03
90	GO:0009056: catabolic process	4.44E-03
91	GO:0006631: fatty acid metabolic process	5.22E-03
92	GO:0010162: seed dormancy process	5.55E-03
93	GO:0006995: cellular response to nitrogen starvation	5.55E-03
94	GO:0055062: phosphate ion homeostasis	5.55E-03
95	GO:0007064: mitotic sister chromatid cohesion	5.55E-03
96	GO:0009688: abscisic acid biosynthetic process	5.55E-03
97	GO:0009744: response to sucrose	5.66E-03
98	GO:0006952: defense response	6.09E-03
99	GO:0006816: calcium ion transport	6.13E-03
100	GO:0009807: lignan biosynthetic process	6.13E-03
101	GO:0009073: aromatic amino acid family biosynthetic process	6.13E-03
102	GO:0009750: response to fructose	6.13E-03
103	GO:0009636: response to toxic substance	6.36E-03
104	GO:0002213: defense response to insect	6.73E-03
105	GO:0006790: sulfur compound metabolic process	6.73E-03
106	GO:0012501: programmed cell death	6.73E-03
107	GO:0006807: nitrogen compound metabolic process	7.36E-03
108	GO:0006006: glucose metabolic process	7.36E-03
109	GO:0080167: response to karrikin	7.54E-03
110	GO:0010200: response to chitin	7.87E-03
111	GO:0002237: response to molecule of bacterial origin	8.01E-03
112	GO:0010540: basipetal auxin transport	8.01E-03
113	GO:0009266: response to temperature stimulus	8.01E-03
114	GO:0042343: indole glucosinolate metabolic process	8.67E-03
115	GO:0046688: response to copper ion	8.67E-03
116	GO:0070588: calcium ion transmembrane transport	8.67E-03
117	GO:0046854: phosphatidylinositol phosphorylation	8.67E-03
118	GO:0009969: xyloglucan biosynthetic process	8.67E-03
119	GO:0006096: glycolytic process	9.03E-03
120	GO:0006636: unsaturated fatty acid biosynthetic process	9.35E-03
121	GO:0009626: plant-type hypersensitive response	9.62E-03
122	GO:0009620: response to fungus	9.93E-03
123	GO:0006874: cellular calcium ion homeostasis	1.08E-02
124	GO:0006825: copper ion transport	1.08E-02
125	GO:0046686: response to cadmium ion	1.15E-02
126	GO:0098542: defense response to other organism	1.15E-02
127	GO:0009751: response to salicylic acid	1.22E-02
128	GO:0009686: gibberellin biosynthetic process	1.31E-02
129	GO:0006012: galactose metabolic process	1.31E-02
130	GO:0006817: phosphate ion transport	1.39E-02
131	GO:0019722: calcium-mediated signaling	1.39E-02
132	GO:0042391: regulation of membrane potential	1.55E-02
133	GO:0080022: primary root development	1.55E-02
134	GO:0010118: stomatal movement	1.55E-02
135	GO:0048544: recognition of pollen	1.72E-02
136	GO:0006814: sodium ion transport	1.72E-02
137	GO:0055114: oxidation-reduction process	1.88E-02
138	GO:0010150: leaf senescence	1.89E-02
139	GO:0002229: defense response to oomycetes	1.90E-02
140	GO:0000302: response to reactive oxygen species	1.90E-02
141	GO:0009630: gravitropism	1.99E-02
142	GO:0007264: small GTPase mediated signal transduction	1.99E-02
143	GO:0030163: protein catabolic process	2.08E-02
144	GO:0009639: response to red or far red light	2.18E-02
145	GO:0006464: cellular protein modification process	2.18E-02
146	GO:0051607: defense response to virus	2.37E-02
147	GO:0009615: response to virus	2.47E-02
148	GO:0009816: defense response to bacterium, incompatible interaction	2.57E-02
149	GO:0009607: response to biotic stimulus	2.57E-02
150	GO:0016311: dephosphorylation	2.88E-02
151	GO:0009409: response to cold	2.92E-02
152	GO:0009817: defense response to fungus, incompatible interaction	2.98E-02
153	GO:0009832: plant-type cell wall biogenesis	3.09E-02
154	GO:0048767: root hair elongation	3.09E-02
155	GO:0006499: N-terminal protein myristoylation	3.20E-02
156	GO:0010043: response to zinc ion	3.31E-02
157	GO:0007568: aging	3.31E-02
158	GO:0006865: amino acid transport	3.42E-02
159	GO:0005975: carbohydrate metabolic process	3.45E-02
160	GO:0006099: tricarboxylic acid cycle	3.64E-02
161	GO:0006511: ubiquitin-dependent protein catabolic process	3.73E-02
162	GO:0010114: response to red light	4.23E-02
163	GO:0009926: auxin polar transport	4.23E-02
164	GO:0006812: cation transport	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0008843: endochitinase activity	0.00E+00
2	GO:0015930: glutamate synthase activity	0.00E+00
3	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
4	GO:0010176: homogentisate phytyltransferase activity	0.00E+00
5	GO:0035885: exochitinase activity	0.00E+00
6	GO:0004674: protein serine/threonine kinase activity	1.02E-05
7	GO:0008061: chitin binding	2.98E-05
8	GO:0005524: ATP binding	1.47E-04
9	GO:0016041: glutamate synthase (ferredoxin) activity	1.93E-04
10	GO:0031127: alpha-(1,2)-fucosyltransferase activity	1.93E-04
11	GO:0004568: chitinase activity	3.32E-04
12	GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity	4.33E-04
13	GO:0015036: disulfide oxidoreductase activity	4.33E-04
14	GO:0004634: phosphopyruvate hydratase activity	4.33E-04
15	GO:0010331: gibberellin binding	4.33E-04
16	GO:0045543: gibberellin 2-beta-dioxygenase activity	4.33E-04
17	GO:0003994: aconitate hydratase activity	4.33E-04
18	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	4.33E-04
19	GO:0015152: glucose-6-phosphate transmembrane transporter activity	4.33E-04
20	GO:0005388: calcium-transporting ATPase activity	5.01E-04
21	GO:0005315: inorganic phosphate transmembrane transporter activity	5.01E-04
22	GO:0031683: G-protein beta/gamma-subunit complex binding	7.06E-04
23	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	7.06E-04
24	GO:0071917: triose-phosphate transmembrane transporter activity	7.06E-04
25	GO:0001664: G-protein coupled receptor binding	7.06E-04
26	GO:0016531: copper chaperone activity	7.06E-04
27	GO:0031176: endo-1,4-beta-xylanase activity	1.01E-03
28	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	1.01E-03
29	GO:0004351: glutamate decarboxylase activity	1.01E-03
30	GO:0017089: glycolipid transporter activity	1.01E-03
31	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.01E-03
32	GO:0010328: auxin influx transmembrane transporter activity	1.34E-03
33	GO:0009916: alternative oxidase activity	1.34E-03
34	GO:0015120: phosphoglycerate transmembrane transporter activity	1.34E-03
35	GO:0004659: prenyltransferase activity	1.34E-03
36	GO:0015368: calcium:cation antiporter activity	1.34E-03
37	GO:0051861: glycolipid binding	1.34E-03
38	GO:0015369: calcium:proton antiporter activity	1.34E-03
39	GO:0051538: 3 iron, 4 sulfur cluster binding	1.70E-03
40	GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity	1.70E-03
41	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	2.10E-03
42	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	2.10E-03
43	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.52E-03
44	GO:0102391: decanoate--CoA ligase activity	2.52E-03
45	GO:0003978: UDP-glucose 4-epimerase activity	2.52E-03
46	GO:0019900: kinase binding	2.52E-03
47	GO:0005242: inward rectifier potassium channel activity	2.52E-03
48	GO:0051920: peroxiredoxin activity	2.52E-03
49	GO:0005507: copper ion binding	2.87E-03
50	GO:0004467: long-chain fatty acid-CoA ligase activity	2.96E-03
51	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	2.96E-03
52	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.01E-03
53	GO:0004672: protein kinase activity	3.11E-03
54	GO:0016301: kinase activity	3.15E-03
55	GO:0015491: cation:cation antiporter activity	3.43E-03
56	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.43E-03
57	GO:0016209: antioxidant activity	3.43E-03
58	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	3.93E-03
59	GO:0004630: phospholipase D activity	3.93E-03
60	GO:0008417: fucosyltransferase activity	4.44E-03
61	GO:0050661: NADP binding	5.01E-03
62	GO:0004364: glutathione transferase activity	5.44E-03
63	GO:0008171: O-methyltransferase activity	5.55E-03
64	GO:0008559: xenobiotic-transporting ATPase activity	6.13E-03
65	GO:0015293: symporter activity	6.36E-03
66	GO:0015114: phosphate ion transmembrane transporter activity	7.36E-03
67	GO:0010329: auxin efflux transmembrane transporter activity	7.36E-03
68	GO:0004022: alcohol dehydrogenase (NAD) activity	7.36E-03
69	GO:0005262: calcium channel activity	7.36E-03
70	GO:0004298: threonine-type endopeptidase activity	1.15E-02
71	GO:0033612: receptor serine/threonine kinase binding	1.15E-02
72	GO:0005516: calmodulin binding	1.19E-02
73	GO:0022891: substrate-specific transmembrane transporter activity	1.31E-02
74	GO:0003756: protein disulfide isomerase activity	1.39E-02
75	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.39E-02
76	GO:0030170: pyridoxal phosphate binding	1.52E-02
77	GO:0030551: cyclic nucleotide binding	1.55E-02
78	GO:0005249: voltage-gated potassium channel activity	1.55E-02
79	GO:0046872: metal ion binding	1.58E-02
80	GO:0019901: protein kinase binding	1.81E-02
81	GO:0004197: cysteine-type endopeptidase activity	1.99E-02
82	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.08E-02
83	GO:0008237: metallopeptidase activity	2.27E-02
84	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.40E-02
85	GO:0051213: dioxygenase activity	2.47E-02
86	GO:0004683: calmodulin-dependent protein kinase activity	2.77E-02
87	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.88E-02
88	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.53E-02
89	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.60E-02
90	GO:0030246: carbohydrate binding	3.69E-02
91	GO:0051539: 4 iron, 4 sulfur cluster binding	3.87E-02
92	GO:0052689: carboxylic ester hydrolase activity	4.00E-02
93	GO:0035091: phosphatidylinositol binding	4.47E-02
94	GO:0005525: GTP binding	4.72E-02
95	GO:0051287: NAD binding	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.82E-04
2	GO:0000015: phosphopyruvate hydratase complex	4.33E-04
3	GO:0031314: extrinsic component of mitochondrial inner membrane	4.33E-04
4	GO:0019773: proteasome core complex, alpha-subunit complex	3.93E-03
5	GO:0005576: extracellular region	4.96E-03
6	GO:0005740: mitochondrial envelope	5.55E-03
7	GO:0008541: proteasome regulatory particle, lid subcomplex	6.13E-03
8	GO:0000502: proteasome complex	7.63E-03
9	GO:0005758: mitochondrial intermembrane space	1.01E-02
10	GO:0005783: endoplasmic reticulum	1.04E-02
11	GO:0070469: respiratory chain	1.08E-02
12	GO:0005741: mitochondrial outer membrane	1.15E-02
13	GO:0005839: proteasome core complex	1.15E-02
14	GO:0016021: integral component of membrane	1.48E-02
15	GO:0005887: integral component of plasma membrane	1.82E-02
16	GO:0071944: cell periphery	2.08E-02
17	GO:0032580: Golgi cisterna membrane	2.18E-02
18	GO:0009707: chloroplast outer membrane	2.98E-02
19	GO:0031969: chloroplast membrane	3.62E-02
20	GO:0090406: pollen tube	4.23E-02
21	GO:0031225: anchored component of membrane	4.42E-02
22	GO:0048046: apoplast	4.77E-02
23	GO:0005743: mitochondrial inner membrane	4.94E-02
24	GO:0031966: mitochondrial membrane	4.96E-02