Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G08650

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0016236: macroautophagy0.00E+00
2GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase0.00E+00
3GO:0009448: gamma-aminobutyric acid metabolic process0.00E+00
4GO:0010111: glyoxysome organization0.00E+00
5GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
6GO:0046109: uridine biosynthetic process0.00E+00
7GO:0006105: succinate metabolic process0.00E+00
8GO:0019484: beta-alanine catabolic process0.00E+00
9GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
10GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
11GO:0010477: response to sulfur dioxide0.00E+00
12GO:0010793: regulation of mRNA export from nucleus0.00E+00
13GO:0019481: L-alanine catabolic process, by transamination0.00E+00
14GO:0048227: plasma membrane to endosome transport0.00E+00
15GO:0051788: response to misfolded protein2.01E-06
16GO:0006542: glutamine biosynthetic process3.11E-05
17GO:0043248: proteasome assembly7.36E-05
18GO:0006014: D-ribose metabolic process7.36E-05
19GO:0046686: response to cadmium ion8.73E-05
20GO:0006635: fatty acid beta-oxidation1.89E-04
21GO:0098702: adenine import across plasma membrane2.06E-04
22GO:0048455: stamen formation2.06E-04
23GO:0046167: glycerol-3-phosphate biosynthetic process2.06E-04
24GO:0035266: meristem growth2.06E-04
25GO:0098710: guanine import across plasma membrane2.06E-04
26GO:0009450: gamma-aminobutyric acid catabolic process2.06E-04
27GO:0007292: female gamete generation2.06E-04
28GO:0015760: glucose-6-phosphate transport2.06E-04
29GO:0030242: pexophagy2.06E-04
30GO:0009865: pollen tube adhesion2.06E-04
31GO:0035344: hypoxanthine transport2.06E-04
32GO:0032469: endoplasmic reticulum calcium ion homeostasis2.06E-04
33GO:0006540: glutamate decarboxylation to succinate2.06E-04
34GO:0010265: SCF complex assembly2.06E-04
35GO:0019478: D-amino acid catabolic process2.06E-04
36GO:0019673: GDP-mannose metabolic process2.06E-04
37GO:0098721: uracil import across plasma membrane2.06E-04
38GO:0042128: nitrate assimilation3.63E-04
39GO:0019395: fatty acid oxidation4.62E-04
40GO:0010033: response to organic substance4.62E-04
41GO:0050684: regulation of mRNA processing4.62E-04
42GO:0006641: triglyceride metabolic process4.62E-04
43GO:0009727: detection of ethylene stimulus4.62E-04
44GO:0007584: response to nutrient4.62E-04
45GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine4.62E-04
46GO:0052542: defense response by callose deposition4.62E-04
47GO:0051258: protein polymerization4.62E-04
48GO:0002237: response to molecule of bacterial origin6.19E-04
49GO:0009225: nucleotide-sugar metabolic process6.92E-04
50GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway7.52E-04
51GO:0060968: regulation of gene silencing7.52E-04
52GO:0015714: phosphoenolpyruvate transport7.52E-04
53GO:1900055: regulation of leaf senescence7.52E-04
54GO:0019563: glycerol catabolic process7.52E-04
55GO:0032784: regulation of DNA-templated transcription, elongation7.52E-04
56GO:1900140: regulation of seedling development7.52E-04
57GO:0042351: 'de novo' GDP-L-fucose biosynthetic process7.52E-04
58GO:0035436: triose phosphate transmembrane transport7.52E-04
59GO:0006882: cellular zinc ion homeostasis1.07E-03
60GO:0048194: Golgi vesicle budding1.07E-03
61GO:0006020: inositol metabolic process1.07E-03
62GO:2001289: lipid X metabolic process1.07E-03
63GO:0070301: cellular response to hydrogen peroxide1.07E-03
64GO:0009052: pentose-phosphate shunt, non-oxidative branch1.07E-03
65GO:0072334: UDP-galactose transmembrane transport1.07E-03
66GO:0006072: glycerol-3-phosphate metabolic process1.07E-03
67GO:0009399: nitrogen fixation1.07E-03
68GO:0009963: positive regulation of flavonoid biosynthetic process1.07E-03
69GO:0033320: UDP-D-xylose biosynthetic process1.43E-03
70GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.43E-03
71GO:0010107: potassium ion import1.43E-03
72GO:0015994: chlorophyll metabolic process1.43E-03
73GO:0006536: glutamate metabolic process1.43E-03
74GO:0045324: late endosome to vacuole transport1.43E-03
75GO:0010188: response to microbial phytotoxin1.43E-03
76GO:0015713: phosphoglycerate transport1.43E-03
77GO:0006878: cellular copper ion homeostasis1.43E-03
78GO:0006096: glycolytic process1.47E-03
79GO:0048367: shoot system development1.53E-03
80GO:0007029: endoplasmic reticulum organization1.81E-03
81GO:0019252: starch biosynthetic process1.91E-03
82GO:0006623: protein targeting to vacuole1.91E-03
83GO:0006891: intra-Golgi vesicle-mediated transport2.04E-03
84GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly2.24E-03
85GO:0048827: phyllome development2.24E-03
86GO:0048232: male gamete generation2.24E-03
87GO:0042732: D-xylose metabolic process2.24E-03
88GO:0010358: leaf shaping2.24E-03
89GO:0010337: regulation of salicylic acid metabolic process2.24E-03
90GO:0050665: hydrogen peroxide biosynthetic process2.24E-03
91GO:0006914: autophagy2.46E-03
92GO:0048280: vesicle fusion with Golgi apparatus2.69E-03
93GO:0034389: lipid particle organization2.69E-03
94GO:0031930: mitochondria-nucleus signaling pathway2.69E-03
95GO:0010029: regulation of seed germination3.10E-03
96GO:0006955: immune response3.16E-03
97GO:0046470: phosphatidylcholine metabolic process3.16E-03
98GO:0048528: post-embryonic root development3.16E-03
99GO:0006614: SRP-dependent cotranslational protein targeting to membrane3.16E-03
100GO:0009690: cytokinin metabolic process3.67E-03
101GO:0006605: protein targeting3.67E-03
102GO:0010078: maintenance of root meristem identity3.67E-03
103GO:0010150: leaf senescence3.72E-03
104GO:0030968: endoplasmic reticulum unfolded protein response4.20E-03
105GO:0006972: hyperosmotic response4.20E-03
106GO:0006002: fructose 6-phosphate metabolic process4.20E-03
107GO:0006811: ion transport4.21E-03
108GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.29E-03
109GO:0010119: regulation of stomatal movement4.42E-03
110GO:0009051: pentose-phosphate shunt, oxidative branch4.75E-03
111GO:0045087: innate immune response4.84E-03
112GO:0016051: carbohydrate biosynthetic process4.84E-03
113GO:0006099: tricarboxylic acid cycle5.05E-03
114GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway5.32E-03
115GO:0048829: root cap development5.93E-03
116GO:0006896: Golgi to vacuole transport5.93E-03
117GO:0006535: cysteine biosynthetic process from serine5.93E-03
118GO:0010015: root morphogenesis6.55E-03
119GO:0043085: positive regulation of catalytic activity6.55E-03
120GO:0052544: defense response by callose deposition in cell wall6.55E-03
121GO:0006790: sulfur compound metabolic process7.20E-03
122GO:0010152: pollen maturation7.20E-03
123GO:0010105: negative regulation of ethylene-activated signaling pathway7.20E-03
124GO:0006829: zinc II ion transport7.87E-03
125GO:0010102: lateral root morphogenesis7.87E-03
126GO:0006006: glucose metabolic process7.87E-03
127GO:0048366: leaf development7.98E-03
128GO:0006541: glutamine metabolic process8.56E-03
129GO:0009933: meristem structural organization8.56E-03
130GO:0090351: seedling development9.27E-03
131GO:0007033: vacuole organization9.27E-03
132GO:0007030: Golgi organization9.27E-03
133GO:0005985: sucrose metabolic process9.27E-03
134GO:0000162: tryptophan biosynthetic process1.00E-02
135GO:0009626: plant-type hypersensitive response1.06E-02
136GO:2000377: regulation of reactive oxygen species metabolic process1.08E-02
137GO:0019344: cysteine biosynthetic process1.08E-02
138GO:0045333: cellular respiration1.08E-02
139GO:0009695: jasmonic acid biosynthetic process1.15E-02
140GO:0031408: oxylipin biosynthetic process1.23E-02
141GO:0030433: ubiquitin-dependent ERAD pathway1.32E-02
142GO:0001944: vasculature development1.40E-02
143GO:0009625: response to insect1.40E-02
144GO:0009408: response to heat1.40E-02
145GO:0048364: root development1.48E-02
146GO:0009306: protein secretion1.48E-02
147GO:0042147: retrograde transport, endosome to Golgi1.57E-02
148GO:0009845: seed germination1.63E-02
149GO:0010087: phloem or xylem histogenesis1.66E-02
150GO:0010118: stomatal movement1.66E-02
151GO:0042391: regulation of membrane potential1.66E-02
152GO:0010182: sugar mediated signaling pathway1.75E-02
153GO:0010154: fruit development1.75E-02
154GO:0042752: regulation of circadian rhythm1.84E-02
155GO:0048544: recognition of pollen1.84E-02
156GO:0009873: ethylene-activated signaling pathway1.93E-02
157GO:0010183: pollen tube guidance1.94E-02
158GO:0009630: gravitropism2.13E-02
159GO:0007264: small GTPase mediated signal transduction2.13E-02
160GO:0010583: response to cyclopentenone2.13E-02
161GO:0006979: response to oxidative stress2.18E-02
162GO:0030163: protein catabolic process2.23E-02
163GO:0071281: cellular response to iron ion2.23E-02
164GO:0010252: auxin homeostasis2.33E-02
165GO:0006904: vesicle docking involved in exocytosis2.43E-02
166GO:0009733: response to auxin2.55E-02
167GO:0001666: response to hypoxia2.64E-02
168GO:0009816: defense response to bacterium, incompatible interaction2.75E-02
169GO:0006974: cellular response to DNA damage stimulus2.86E-02
170GO:0006888: ER to Golgi vesicle-mediated transport2.97E-02
171GO:0048573: photoperiodism, flowering2.97E-02
172GO:0015031: protein transport3.07E-02
173GO:0016049: cell growth3.08E-02
174GO:0009826: unidimensional cell growth3.10E-02
175GO:0008219: cell death3.19E-02
176GO:0030244: cellulose biosynthetic process3.19E-02
177GO:0048767: root hair elongation3.31E-02
178GO:0010311: lateral root formation3.31E-02
179GO:0006499: N-terminal protein myristoylation3.42E-02
180GO:0010043: response to zinc ion3.54E-02
181GO:0006865: amino acid transport3.66E-02
182GO:0009867: jasmonic acid mediated signaling pathway3.78E-02
183GO:0080167: response to karrikin3.98E-02
184GO:0030001: metal ion transport4.15E-02
185GO:0016192: vesicle-mediated transport4.18E-02
186GO:0006511: ubiquitin-dependent protein catabolic process4.20E-02
187GO:0006887: exocytosis4.27E-02
188GO:0006631: fatty acid metabolic process4.27E-02
189GO:0009744: response to sucrose4.52E-02
190GO:0055114: oxidation-reduction process4.78E-02
191GO:0009651: response to salt stress4.90E-02
192GO:0006886: intracellular protein transport4.90E-02
193GO:0009636: response to toxic substance4.91E-02
194GO:0009965: leaf morphogenesis4.91E-02
RankGO TermAdjusted P value
1GO:0008482: sulfite oxidase activity0.00E+00
2GO:0051499: D-aminoacyl-tRNA deacylase activity0.00E+00
3GO:0047205: quinate O-hydroxycinnamoyltransferase activity0.00E+00
4GO:0005548: phospholipid transporter activity0.00E+00
5GO:0047172: shikimate O-hydroxycinnamoyltransferase activity0.00E+00
6GO:0019211: phosphatase activator activity0.00E+00
7GO:0034387: 4-aminobutyrate:pyruvate transaminase activity0.00E+00
8GO:0004370: glycerol kinase activity0.00E+00
9GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity0.00E+00
10GO:0001653: peptide receptor activity1.69E-05
11GO:0005524: ATP binding4.68E-05
12GO:0004356: glutamate-ammonia ligase activity5.00E-05
13GO:0004012: phospholipid-translocating ATPase activity1.02E-04
14GO:0004747: ribokinase activity1.02E-04
15GO:0008865: fructokinase activity1.73E-04
16GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity2.06E-04
17GO:0015208: guanine transmembrane transporter activity2.06E-04
18GO:0008446: GDP-mannose 4,6-dehydratase activity2.06E-04
19GO:0015294: solute:cation symporter activity2.06E-04
20GO:0003867: 4-aminobutyrate transaminase activity2.06E-04
21GO:0015207: adenine transmembrane transporter activity2.06E-04
22GO:0019707: protein-cysteine S-acyltransferase activity2.06E-04
23GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity2.06E-04
24GO:0030955: potassium ion binding3.11E-04
25GO:0004743: pyruvate kinase activity3.11E-04
26GO:0015152: glucose-6-phosphate transmembrane transporter activity4.62E-04
27GO:0038199: ethylene receptor activity4.62E-04
28GO:0019200: carbohydrate kinase activity4.62E-04
29GO:0003988: acetyl-CoA C-acyltransferase activity4.62E-04
30GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism5.50E-04
31GO:0004383: guanylate cyclase activity7.52E-04
32GO:0016805: dipeptidase activity7.52E-04
33GO:0071917: triose-phosphate transmembrane transporter activity7.52E-04
34GO:0005093: Rab GDP-dissociation inhibitor activity7.52E-04
35GO:0005047: signal recognition particle binding7.52E-04
36GO:0004751: ribose-5-phosphate isomerase activity7.52E-04
37GO:0051740: ethylene binding1.07E-03
38GO:0004300: enoyl-CoA hydratase activity1.07E-03
39GO:0004108: citrate (Si)-synthase activity1.07E-03
40GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity1.07E-03
41GO:0000287: magnesium ion binding1.21E-03
42GO:0015120: phosphoglycerate transmembrane transporter activity1.43E-03
43GO:0004834: tryptophan synthase activity1.43E-03
44GO:0004345: glucose-6-phosphate dehydrogenase activity1.43E-03
45GO:0015210: uracil transmembrane transporter activity1.43E-03
46GO:0050378: UDP-glucuronate 4-epimerase activity1.43E-03
47GO:0009916: alternative oxidase activity1.43E-03
48GO:0030151: molybdenum ion binding1.81E-03
49GO:0005459: UDP-galactose transmembrane transporter activity1.81E-03
50GO:0005546: phosphatidylinositol-4,5-bisphosphate binding1.81E-03
51GO:0005496: steroid binding1.81E-03
52GO:0048040: UDP-glucuronate decarboxylase activity2.24E-03
53GO:0031593: polyubiquitin binding2.24E-03
54GO:0036402: proteasome-activating ATPase activity2.24E-03
55GO:0004124: cysteine synthase activity2.69E-03
56GO:0070403: NAD+ binding2.69E-03
57GO:0003950: NAD+ ADP-ribosyltransferase activity2.69E-03
58GO:0003730: mRNA 3'-UTR binding2.69E-03
59GO:0004620: phospholipase activity3.16E-03
60GO:0008235: metalloexopeptidase activity3.16E-03
61GO:0003872: 6-phosphofructokinase activity3.16E-03
62GO:0005507: copper ion binding3.40E-03
63GO:0004714: transmembrane receptor protein tyrosine kinase activity3.67E-03
64GO:0004525: ribonuclease III activity3.67E-03
65GO:0004869: cysteine-type endopeptidase inhibitor activity3.67E-03
66GO:0005096: GTPase activator activity4.01E-03
67GO:0004630: phospholipase D activity4.20E-03
68GO:0005267: potassium channel activity4.20E-03
69GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity4.20E-03
70GO:0050897: cobalt ion binding4.42E-03
71GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity4.75E-03
72GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity5.32E-03
73GO:0045309: protein phosphorylated amino acid binding5.32E-03
74GO:0004674: protein serine/threonine kinase activity5.80E-03
75GO:0015020: glucuronosyltransferase activity5.93E-03
76GO:0004673: protein histidine kinase activity5.93E-03
77GO:0016887: ATPase activity6.06E-03
78GO:0004177: aminopeptidase activity6.55E-03
79GO:0019904: protein domain specific binding6.55E-03
80GO:0004521: endoribonuclease activity7.20E-03
81GO:0000155: phosphorelay sensor kinase activity7.87E-03
82GO:0005262: calcium channel activity7.87E-03
83GO:0005315: inorganic phosphate transmembrane transporter activity7.87E-03
84GO:0030552: cAMP binding9.27E-03
85GO:0030553: cGMP binding9.27E-03
86GO:0017025: TBP-class protein binding9.27E-03
87GO:0015171: amino acid transmembrane transporter activity9.31E-03
88GO:0045735: nutrient reservoir activity9.94E-03
89GO:0016491: oxidoreductase activity1.02E-02
90GO:0043130: ubiquitin binding1.08E-02
91GO:0043424: protein histidine kinase binding1.15E-02
92GO:0005216: ion channel activity1.15E-02
93GO:0019706: protein-cysteine S-palmitoyltransferase activity1.23E-02
94GO:0004672: protein kinase activity1.23E-02
95GO:0004176: ATP-dependent peptidase activity1.23E-02
96GO:0003729: mRNA binding1.26E-02
97GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.54E-02
98GO:0005249: voltage-gated potassium channel activity1.66E-02
99GO:0030551: cyclic nucleotide binding1.66E-02
100GO:0030170: pyridoxal phosphate binding1.67E-02
101GO:0046873: metal ion transmembrane transporter activity1.75E-02
102GO:0050662: coenzyme binding1.84E-02
103GO:0004872: receptor activity1.94E-02
104GO:0016301: kinase activity2.08E-02
105GO:0000156: phosphorelay response regulator activity2.23E-02
106GO:0005515: protein binding2.34E-02
107GO:0008237: metallopeptidase activity2.43E-02
108GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.64E-02
109GO:0008375: acetylglucosaminyltransferase activity2.86E-02
110GO:0004222: metalloendopeptidase activity3.42E-02
111GO:0030145: manganese ion binding3.54E-02
112GO:0050660: flavin adenine dinucleotide binding3.72E-02
113GO:0003746: translation elongation factor activity3.78E-02
114GO:0004497: monooxygenase activity3.98E-02
115GO:0000149: SNARE binding4.02E-02
116GO:0050661: NADP binding4.15E-02
117GO:0005484: SNAP receptor activity4.52E-02
RankGO TermAdjusted P value
1GO:0005785: signal recognition particle receptor complex0.00E+00
2GO:0071561: nucleus-vacuole junction0.00E+00
3GO:0016021: integral component of membrane2.86E-07
4GO:0005794: Golgi apparatus3.68E-06
5GO:0005829: cytosol9.88E-06
6GO:0005886: plasma membrane1.84E-05
7GO:0005802: trans-Golgi network5.38E-05
8GO:0031902: late endosome membrane7.57E-05
9GO:0005783: endoplasmic reticulum8.04E-05
10GO:0030173: integral component of Golgi membrane1.02E-04
11GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I2.06E-04
12GO:0045252: oxoglutarate dehydrogenase complex2.06E-04
13GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II2.06E-04
14GO:0000138: Golgi trans cisterna2.06E-04
15GO:0008540: proteasome regulatory particle, base subcomplex3.11E-04
16GO:0005789: endoplasmic reticulum membrane3.49E-04
17GO:0016020: membrane6.02E-04
18GO:0030176: integral component of endoplasmic reticulum membrane6.92E-04
19GO:0042406: extrinsic component of endoplasmic reticulum membrane7.52E-04
20GO:0031461: cullin-RING ubiquitin ligase complex1.07E-03
21GO:0005768: endosome1.43E-03
22GO:0005776: autophagosome1.43E-03
23GO:0005770: late endosome1.66E-03
24GO:0005945: 6-phosphofructokinase complex1.81E-03
25GO:0030140: trans-Golgi network transport vesicle2.24E-03
26GO:0005774: vacuolar membrane2.52E-03
27GO:0031597: cytosolic proteasome complex2.69E-03
28GO:0016363: nuclear matrix2.69E-03
29GO:0000794: condensed nuclear chromosome3.16E-03
30GO:0031595: nuclear proteasome complex3.16E-03
31GO:0012507: ER to Golgi transport vesicle membrane3.67E-03
32GO:0009514: glyoxysome4.20E-03
33GO:0005786: signal recognition particle, endoplasmic reticulum targeting4.20E-03
34GO:0031901: early endosome membrane4.75E-03
35GO:0005737: cytoplasm5.35E-03
36GO:0090404: pollen tube tip6.55E-03
37GO:0000502: proteasome complex8.40E-03
38GO:0005777: peroxisome9.17E-03
39GO:0005795: Golgi stack9.27E-03
40GO:0005769: early endosome1.00E-02
41GO:0010008: endosome membrane1.03E-02
42GO:0000139: Golgi membrane1.07E-02
43GO:0070469: respiratory chain1.15E-02
44GO:0031410: cytoplasmic vesicle1.32E-02
45GO:0030136: clathrin-coated vesicle1.57E-02
46GO:0000145: exocyst2.13E-02
47GO:0032580: Golgi cisterna membrane2.33E-02
48GO:0000151: ubiquitin ligase complex3.19E-02
49GO:0005643: nuclear pore3.19E-02
50GO:0000325: plant-type vacuole3.54E-02
51GO:0000786: nucleosome3.66E-02
52GO:0005819: spindle4.02E-02
53GO:0031201: SNARE complex4.27E-02
54GO:0005773: vacuole4.38E-02
Gene type



Gene DE type