co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G08520

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002184: cytoplasmic translational termination	0.00E+00
2	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
3	GO:0017038: protein import	0.00E+00
4	GO:0042493: response to drug	0.00E+00
5	GO:0006399: tRNA metabolic process	0.00E+00
6	GO:0032544: plastid translation	9.31E-07
7	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	2.16E-05
8	GO:0009658: chloroplast organization	3.20E-05
9	GO:1901259: chloroplast rRNA processing	3.64E-05
10	GO:0009735: response to cytokinin	4.30E-05
11	GO:0009828: plant-type cell wall loosening	6.82E-05
12	GO:0015979: photosynthesis	6.97E-05
13	GO:0010206: photosystem II repair	1.00E-04
14	GO:0034337: RNA folding	1.08E-04
15	GO:0042371: vitamin K biosynthetic process	1.08E-04
16	GO:0006898: receptor-mediated endocytosis	2.52E-04
17	GO:0034755: iron ion transmembrane transport	2.52E-04
18	GO:0010541: acropetal auxin transport	2.52E-04
19	GO:0001736: establishment of planar polarity	2.52E-04
20	GO:0009664: plant-type cell wall organization	3.53E-04
21	GO:0046168: glycerol-3-phosphate catabolic process	4.19E-04
22	GO:0006013: mannose metabolic process	4.19E-04
23	GO:0010160: formation of animal organ boundary	4.19E-04
24	GO:0090391: granum assembly	4.19E-04
25	GO:0006518: peptide metabolic process	4.19E-04
26	GO:0016045: detection of bacterium	4.19E-04
27	GO:0010359: regulation of anion channel activity	4.19E-04
28	GO:0051513: regulation of monopolar cell growth	6.01E-04
29	GO:0010239: chloroplast mRNA processing	6.01E-04
30	GO:0043481: anthocyanin accumulation in tissues in response to UV light	6.01E-04
31	GO:0006072: glycerol-3-phosphate metabolic process	6.01E-04
32	GO:0009650: UV protection	6.01E-04
33	GO:1901332: negative regulation of lateral root development	6.01E-04
34	GO:2001141: regulation of RNA biosynthetic process	6.01E-04
35	GO:0009413: response to flooding	6.01E-04
36	GO:0042335: cuticle development	6.53E-04
37	GO:0009958: positive gravitropism	7.01E-04
38	GO:0006412: translation	7.45E-04
39	GO:0010109: regulation of photosynthesis	7.98E-04
40	GO:0010236: plastoquinone biosynthetic process	1.01E-03
41	GO:0010027: thylakoid membrane organization	1.22E-03
42	GO:0000470: maturation of LSU-rRNA	1.23E-03
43	GO:0060918: auxin transport	1.23E-03
44	GO:0009627: systemic acquired resistance	1.36E-03
45	GO:0015995: chlorophyll biosynthetic process	1.43E-03
46	GO:0042372: phylloquinone biosynthetic process	1.47E-03
47	GO:0010311: lateral root formation	1.66E-03
48	GO:0009772: photosynthetic electron transport in photosystem II	1.73E-03
49	GO:0010196: nonphotochemical quenching	1.73E-03
50	GO:0009826: unidimensional cell growth	1.97E-03
51	GO:0009637: response to blue light	1.99E-03
52	GO:0048564: photosystem I assembly	2.00E-03
53	GO:0006353: DNA-templated transcription, termination	2.00E-03
54	GO:0006605: protein targeting	2.00E-03
55	GO:0030001: metal ion transport	2.26E-03
56	GO:0071482: cellular response to light stimulus	2.28E-03
57	GO:0009926: auxin polar transport	2.56E-03
58	GO:0010114: response to red light	2.56E-03
59	GO:0009245: lipid A biosynthetic process	2.57E-03
60	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.83E-03
61	GO:0009638: phototropism	2.88E-03
62	GO:0006949: syncytium formation	3.20E-03
63	GO:0006535: cysteine biosynthetic process from serine	3.20E-03
64	GO:0048829: root cap development	3.20E-03
65	GO:0010015: root morphogenesis	3.53E-03
66	GO:0052544: defense response by callose deposition in cell wall	3.53E-03
67	GO:0006879: cellular iron ion homeostasis	3.53E-03
68	GO:0006352: DNA-templated transcription, initiation	3.53E-03
69	GO:0048765: root hair cell differentiation	3.53E-03
70	GO:0008361: regulation of cell size	3.87E-03
71	GO:0016024: CDP-diacylglycerol biosynthetic process	3.87E-03
72	GO:0009785: blue light signaling pathway	4.23E-03
73	GO:0030048: actin filament-based movement	4.23E-03
74	GO:0010540: basipetal auxin transport	4.59E-03
75	GO:0010143: cutin biosynthetic process	4.59E-03
76	GO:0009624: response to nematode	4.86E-03
77	GO:0006833: water transport	5.35E-03
78	GO:0019344: cysteine biosynthetic process	5.75E-03
79	GO:0051017: actin filament bundle assembly	5.75E-03
80	GO:0003333: amino acid transmembrane transport	6.56E-03
81	GO:0009734: auxin-activated signaling pathway	6.85E-03
82	GO:0009790: embryo development	7.10E-03
83	GO:0009411: response to UV	7.42E-03
84	GO:0048443: stamen development	7.87E-03
85	GO:0045490: pectin catabolic process	8.39E-03
86	GO:0080022: primary root development	8.79E-03
87	GO:0034220: ion transmembrane transport	8.79E-03
88	GO:0009739: response to gibberellin	9.39E-03
89	GO:0009646: response to absence of light	9.74E-03
90	GO:0035556: intracellular signal transduction	9.85E-03
91	GO:0016032: viral process	1.12E-02
92	GO:0030163: protein catabolic process	1.18E-02
93	GO:0010090: trichome morphogenesis	1.18E-02
94	GO:0009567: double fertilization forming a zygote and endosperm	1.23E-02
95	GO:0009639: response to red or far red light	1.23E-02
96	GO:0055085: transmembrane transport	1.24E-02
97	GO:0042254: ribosome biogenesis	1.33E-02
98	GO:0006468: protein phosphorylation	1.61E-02
99	GO:0009817: defense response to fungus, incompatible interaction	1.68E-02
100	GO:0010218: response to far red light	1.80E-02
101	GO:0007568: aging	1.86E-02
102	GO:0048527: lateral root development	1.86E-02
103	GO:0006865: amino acid transport	1.92E-02
104	GO:0016051: carbohydrate biosynthetic process	1.99E-02
105	GO:0009640: photomorphogenesis	2.38E-02
106	GO:0009733: response to auxin	2.60E-02
107	GO:0006855: drug transmembrane transport	2.66E-02
108	GO:0006364: rRNA processing	2.94E-02
109	GO:0006508: proteolysis	2.95E-02
110	GO:0051603: proteolysis involved in cellular protein catabolic process	3.02E-02
111	GO:0009740: gibberellic acid mediated signaling pathway	3.63E-02
112	GO:0005975: carbohydrate metabolic process	3.77E-02
113	GO:0009416: response to light stimulus	4.23E-02

Rank	GO Term	Adjusted P value
1	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
2	GO:0019843: rRNA binding	5.92E-09
3	GO:0016851: magnesium chelatase activity	5.42E-06
4	GO:0004856: xylulokinase activity	1.08E-04
5	GO:0003735: structural constituent of ribosome	2.82E-04
6	GO:0005528: FK506 binding	3.57E-04
7	GO:0015462: ATPase-coupled protein transmembrane transporter activity	4.19E-04
8	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	4.19E-04
9	GO:0030570: pectate lyase activity	5.16E-04
10	GO:0043023: ribosomal large subunit binding	6.01E-04
11	GO:0004659: prenyltransferase activity	7.98E-04
12	GO:0001053: plastid sigma factor activity	7.98E-04
13	GO:0010011: auxin binding	7.98E-04
14	GO:0016987: sigma factor activity	7.98E-04
15	GO:0010328: auxin influx transmembrane transporter activity	7.98E-04
16	GO:0016829: lyase activity	8.86E-04
17	GO:0016773: phosphotransferase activity, alcohol group as acceptor	1.01E-03
18	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.23E-03
19	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.23E-03
20	GO:0031177: phosphopantetheine binding	1.23E-03
21	GO:0004559: alpha-mannosidase activity	1.47E-03
22	GO:0004124: cysteine synthase activity	1.47E-03
23	GO:0000035: acyl binding	1.47E-03
24	GO:0008236: serine-type peptidase activity	1.50E-03
25	GO:0005524: ATP binding	1.58E-03
26	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.61E-03
27	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.00E-03
28	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	2.00E-03
29	GO:0043022: ribosome binding	2.00E-03
30	GO:0005381: iron ion transmembrane transporter activity	2.88E-03
31	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.97E-03
32	GO:0015020: glucuronosyltransferase activity	3.20E-03
33	GO:0031072: heat shock protein binding	4.23E-03
34	GO:0009982: pseudouridine synthase activity	4.23E-03
35	GO:0010329: auxin efflux transmembrane transporter activity	4.23E-03
36	GO:0008081: phosphoric diester hydrolase activity	4.23E-03
37	GO:0003774: motor activity	4.59E-03
38	GO:0005215: transporter activity	6.39E-03
39	GO:0004707: MAP kinase activity	6.56E-03
40	GO:0004252: serine-type endopeptidase activity	6.75E-03
41	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	7.82E-03
42	GO:0003756: protein disulfide isomerase activity	7.87E-03
43	GO:0008080: N-acetyltransferase activity	9.26E-03
44	GO:0004518: nuclease activity	1.12E-02
45	GO:0016301: kinase activity	1.18E-02
46	GO:0051015: actin filament binding	1.18E-02
47	GO:0016791: phosphatase activity	1.23E-02
48	GO:0015250: water channel activity	1.39E-02
49	GO:0008375: acetylglucosaminyltransferase activity	1.51E-02
50	GO:0003723: RNA binding	1.64E-02
51	GO:0004222: metalloendopeptidase activity	1.80E-02
52	GO:0005509: calcium ion binding	2.03E-02
53	GO:0004674: protein serine/threonine kinase activity	2.05E-02
54	GO:0004185: serine-type carboxypeptidase activity	2.38E-02
55	GO:0043621: protein self-association	2.52E-02
56	GO:0015293: symporter activity	2.59E-02
57	GO:0051287: NAD binding	2.73E-02
58	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.94E-02
59	GO:0015171: amino acid transmembrane transporter activity	3.17E-02
60	GO:0004650: polygalacturonase activity	3.55E-02
61	GO:0003729: mRNA binding	3.68E-02
62	GO:0016887: ATPase activity	3.70E-02
63	GO:0051082: unfolded protein binding	3.78E-02
64	GO:0016746: transferase activity, transferring acyl groups	3.86E-02
65	GO:0008026: ATP-dependent helicase activity	3.94E-02
66	GO:0000166: nucleotide binding	4.23E-02
67	GO:0030170: pyridoxal phosphate binding	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0009570: chloroplast stroma	2.03E-17
2	GO:0009941: chloroplast envelope	4.00E-14
3	GO:0009507: chloroplast	4.77E-12
4	GO:0009543: chloroplast thylakoid lumen	1.53E-10
5	GO:0031977: thylakoid lumen	1.65E-10
6	GO:0009535: chloroplast thylakoid membrane	1.12E-09
7	GO:0009579: thylakoid	2.94E-09
8	GO:0005840: ribosome	5.89E-07
9	GO:0010007: magnesium chelatase complex	2.29E-06
10	GO:0009534: chloroplast thylakoid	9.73E-06
11	GO:0009654: photosystem II oxygen evolving complex	1.36E-05
12	GO:0019898: extrinsic component of membrane	4.56E-05
13	GO:0005618: cell wall	9.03E-05
14	GO:0016020: membrane	9.94E-05
15	GO:0009515: granal stacked thylakoid	1.08E-04
16	GO:0030095: chloroplast photosystem II	2.55E-04
17	GO:0009509: chromoplast	4.19E-04
18	GO:0009331: glycerol-3-phosphate dehydrogenase complex	6.01E-04
19	GO:0009533: chloroplast stromal thylakoid	1.73E-03
20	GO:0009986: cell surface	1.73E-03
21	GO:0009536: plastid	1.83E-03
22	GO:0009505: plant-type cell wall	1.90E-03
23	GO:0016459: myosin complex	3.20E-03
24	GO:0032040: small-subunit processome	3.87E-03
25	GO:0005576: extracellular region	6.45E-03
26	GO:0015629: actin cytoskeleton	7.42E-03
27	GO:0009523: photosystem II	1.02E-02
28	GO:0031969: chloroplast membrane	1.62E-02
29	GO:0015934: large ribosomal subunit	1.86E-02
30	GO:0005768: endosome	1.97E-02
31	GO:0005886: plasma membrane	2.02E-02
32	GO:0005856: cytoskeleton	2.59E-02
33	GO:0010008: endosome membrane	3.39E-02
34	GO:0009706: chloroplast inner membrane	3.78E-02