co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G08380

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090279: regulation of calcium ion import	0.00E+00
2	GO:0030644: cellular chloride ion homeostasis	0.00E+00
3	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
4	GO:0071474: cellular hyperosmotic response	0.00E+00
5	GO:1903428: positive regulation of reactive oxygen species biosynthetic process	0.00E+00
6	GO:0070584: mitochondrion morphogenesis	0.00E+00
7	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
8	GO:0046677: response to antibiotic	0.00E+00
9	GO:0009768: photosynthesis, light harvesting in photosystem I	1.13E-21
10	GO:0015979: photosynthesis	2.81E-20
11	GO:0018298: protein-chromophore linkage	1.40E-15
12	GO:0009645: response to low light intensity stimulus	3.02E-11
13	GO:0010114: response to red light	6.04E-11
14	GO:0009644: response to high light intensity	3.54E-09
15	GO:0009769: photosynthesis, light harvesting in photosystem II	7.93E-09
16	GO:0010218: response to far red light	2.72E-08
17	GO:0009416: response to light stimulus	4.41E-07
18	GO:0009637: response to blue light	1.48E-06
19	GO:0015995: chlorophyll biosynthetic process	1.77E-05
20	GO:0009765: photosynthesis, light harvesting	2.35E-05
21	GO:0010196: nonphotochemical quenching	1.05E-04
22	GO:0009409: response to cold	1.33E-04
23	GO:0018002: N-terminal peptidyl-glutamic acid acetylation	1.75E-04
24	GO:0015812: gamma-aminobutyric acid transport	1.75E-04
25	GO:0006475: internal protein amino acid acetylation	1.75E-04
26	GO:0071806: protein transmembrane transport	1.75E-04
27	GO:0006474: N-terminal protein amino acid acetylation	1.75E-04
28	GO:0017198: N-terminal peptidyl-serine acetylation	1.75E-04
29	GO:0055114: oxidation-reduction process	2.13E-04
30	GO:0009735: response to cytokinin	2.18E-04
31	GO:0035304: regulation of protein dephosphorylation	3.96E-04
32	GO:1902884: positive regulation of response to oxidative stress	3.96E-04
33	GO:0050992: dimethylallyl diphosphate biosynthetic process	3.96E-04
34	GO:0051262: protein tetramerization	3.96E-04
35	GO:0006883: cellular sodium ion homeostasis	3.96E-04
36	GO:0051170: nuclear import	3.96E-04
37	GO:0007623: circadian rhythm	4.52E-04
38	GO:0010207: photosystem II assembly	4.96E-04
39	GO:0090351: seedling development	5.54E-04
40	GO:0006598: polyamine catabolic process	6.47E-04
41	GO:1901562: response to paraquat	6.47E-04
42	GO:1902448: positive regulation of shade avoidance	6.47E-04
43	GO:0048511: rhythmic process	8.23E-04
44	GO:0009269: response to desiccation	8.23E-04
45	GO:0010017: red or far-red light signaling pathway	8.98E-04
46	GO:0031936: negative regulation of chromatin silencing	9.23E-04
47	GO:0050482: arachidonic acid secretion	9.23E-04
48	GO:0044211: CTP salvage	9.23E-04
49	GO:0080167: response to karrikin	1.21E-03
50	GO:0030104: water homeostasis	1.22E-03
51	GO:0044206: UMP salvage	1.22E-03
52	GO:2000306: positive regulation of photomorphogenesis	1.22E-03
53	GO:0010600: regulation of auxin biosynthetic process	1.22E-03
54	GO:1901002: positive regulation of response to salt stress	1.22E-03
55	GO:0043097: pyrimidine nucleoside salvage	1.56E-03
56	GO:0016123: xanthophyll biosynthetic process	1.56E-03
57	GO:1901657: glycosyl compound metabolic process	1.85E-03
58	GO:0009635: response to herbicide	1.91E-03
59	GO:0042549: photosystem II stabilization	1.91E-03
60	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.91E-03
61	GO:0045962: positive regulation of development, heterochronic	1.91E-03
62	GO:0006206: pyrimidine nucleobase metabolic process	1.91E-03
63	GO:0071470: cellular response to osmotic stress	2.30E-03
64	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.30E-03
65	GO:0010161: red light signaling pathway	2.70E-03
66	GO:1900056: negative regulation of leaf senescence	2.70E-03
67	GO:0080111: DNA demethylation	2.70E-03
68	GO:0006605: protein targeting	3.13E-03
69	GO:0009704: de-etiolation	3.13E-03
70	GO:0006644: phospholipid metabolic process	3.13E-03
71	GO:0010928: regulation of auxin mediated signaling pathway	3.13E-03
72	GO:0009642: response to light intensity	3.13E-03
73	GO:0000160: phosphorelay signal transduction system	3.19E-03
74	GO:0010119: regulation of stomatal movement	3.51E-03
75	GO:0010099: regulation of photomorphogenesis	3.58E-03
76	GO:0007186: G-protein coupled receptor signaling pathway	3.58E-03
77	GO:0034599: cellular response to oxidative stress	4.02E-03
78	GO:0010206: photosystem II repair	4.05E-03
79	GO:0090333: regulation of stomatal closure	4.05E-03
80	GO:0010205: photoinhibition	4.54E-03
81	GO:0030042: actin filament depolymerization	4.54E-03
82	GO:0010018: far-red light signaling pathway	4.54E-03
83	GO:1900865: chloroplast RNA modification	4.54E-03
84	GO:0010380: regulation of chlorophyll biosynthetic process	4.54E-03
85	GO:0009658: chloroplast organization	4.83E-03
86	GO:0009640: photomorphogenesis	4.95E-03
87	GO:0009688: abscisic acid biosynthetic process	5.05E-03
88	GO:0009641: shade avoidance	5.05E-03
89	GO:0006949: syncytium formation	5.05E-03
90	GO:0010162: seed dormancy process	5.05E-03
91	GO:0008643: carbohydrate transport	5.35E-03
92	GO:0019684: photosynthesis, light reaction	5.58E-03
93	GO:0043085: positive regulation of catalytic activity	5.58E-03
94	GO:0018119: peptidyl-cysteine S-nitrosylation	5.58E-03
95	GO:0030148: sphingolipid biosynthetic process	5.58E-03
96	GO:0042538: hyperosmotic salinity response	6.21E-03
97	GO:0009585: red, far-red light phototransduction	6.66E-03
98	GO:0050826: response to freezing	6.70E-03
99	GO:0018107: peptidyl-threonine phosphorylation	6.70E-03
100	GO:0009718: anthocyanin-containing compound biosynthetic process	6.70E-03
101	GO:0044550: secondary metabolite biosynthetic process	7.06E-03
102	GO:0007015: actin filament organization	7.28E-03
103	GO:0009266: response to temperature stimulus	7.28E-03
104	GO:0042753: positive regulation of circadian rhythm	8.51E-03
105	GO:0006874: cellular calcium ion homeostasis	9.80E-03
106	GO:0006351: transcription, DNA-templated	9.95E-03
107	GO:0006629: lipid metabolic process	1.04E-02
108	GO:0003333: amino acid transmembrane transport	1.05E-02
109	GO:0010431: seed maturation	1.05E-02
110	GO:0071215: cellular response to abscisic acid stimulus	1.19E-02
111	GO:0045492: xylan biosynthetic process	1.26E-02
112	GO:0070417: cellular response to cold	1.33E-02
113	GO:0006662: glycerol ether metabolic process	1.49E-02
114	GO:0010182: sugar mediated signaling pathway	1.49E-02
115	GO:0006814: sodium ion transport	1.56E-02
116	GO:0000302: response to reactive oxygen species	1.72E-02
117	GO:0009639: response to red or far red light	1.98E-02
118	GO:0009828: plant-type cell wall loosening	1.98E-02
119	GO:0010286: heat acclimation	2.06E-02
120	GO:0006355: regulation of transcription, DNA-templated	2.09E-02
121	GO:0016579: protein deubiquitination	2.15E-02
122	GO:0016126: sterol biosynthetic process	2.24E-02
123	GO:0048573: photoperiodism, flowering	2.52E-02
124	GO:0016311: dephosphorylation	2.61E-02
125	GO:0048481: plant ovule development	2.71E-02
126	GO:0006970: response to osmotic stress	2.75E-02
127	GO:0005975: carbohydrate metabolic process	2.83E-02
128	GO:0006811: ion transport	2.90E-02
129	GO:0009723: response to ethylene	2.95E-02
130	GO:0007568: aging	3.00E-02
131	GO:0009910: negative regulation of flower development	3.00E-02
132	GO:0009631: cold acclimation	3.00E-02
133	GO:0006865: amino acid transport	3.10E-02
134	GO:0016051: carbohydrate biosynthetic process	3.20E-02
135	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.27E-02
136	GO:0006839: mitochondrial transport	3.52E-02
137	GO:0042542: response to hydrogen peroxide	3.73E-02
138	GO:0045454: cell redox homeostasis	3.78E-02
139	GO:0045892: negative regulation of transcription, DNA-templated	3.84E-02
140	GO:0051707: response to other organism	3.84E-02
141	GO:0009965: leaf morphogenesis	4.17E-02
142	GO:0032259: methylation	4.46E-02
143	GO:0006812: cation transport	4.51E-02
144	GO:0009664: plant-type cell wall organization	4.51E-02
145	GO:0009737: response to abscisic acid	4.61E-02
146	GO:0009408: response to heat	4.65E-02
147	GO:0009414: response to water deprivation	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0004567: beta-mannosidase activity	0.00E+00
2	GO:0080082: esculin beta-glucosidase activity	0.00E+00
3	GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	0.00E+00
4	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
5	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
6	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
7	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
8	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
9	GO:0009540: zeaxanthin epoxidase [overall] activity	0.00E+00
10	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
11	GO:0090711: FMN hydrolase activity	0.00E+00
12	GO:0031409: pigment binding	2.49E-22
13	GO:0016168: chlorophyll binding	4.34E-18
14	GO:0046872: metal ion binding	6.71E-05
15	GO:1990190: peptide-glutamate-N-acetyltransferase activity	1.75E-04
16	GO:0052631: sphingolipid delta-8 desaturase activity	1.75E-04
17	GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity	1.75E-04
18	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	1.75E-04
19	GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor	1.75E-04
20	GO:0005227: calcium activated cation channel activity	1.75E-04
21	GO:0080079: cellobiose glucosidase activity	1.75E-04
22	GO:1990189: peptide-serine-N-acetyltransferase activity	1.75E-04
23	GO:0010242: oxygen evolving activity	1.75E-04
24	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	1.75E-04
25	GO:0016630: protochlorophyllide reductase activity	3.96E-04
26	GO:0015180: L-alanine transmembrane transporter activity	3.96E-04
27	GO:0046592: polyamine oxidase activity	6.47E-04
28	GO:0010277: chlorophyllide a oxygenase [overall] activity	6.47E-04
29	GO:0015189: L-lysine transmembrane transporter activity	9.23E-04
30	GO:0015181: arginine transmembrane transporter activity	9.23E-04
31	GO:0004930: G-protein coupled receptor activity	1.22E-03
32	GO:0004845: uracil phosphoribosyltransferase activity	1.22E-03
33	GO:0005313: L-glutamate transmembrane transporter activity	1.22E-03
34	GO:0004506: squalene monooxygenase activity	1.22E-03
35	GO:0004623: phospholipase A2 activity	1.56E-03
36	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.56E-03
37	GO:0051538: 3 iron, 4 sulfur cluster binding	1.56E-03
38	GO:0000156: phosphorelay response regulator activity	1.85E-03
39	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.91E-03
40	GO:0004462: lactoylglutathione lyase activity	1.91E-03
41	GO:0005261: cation channel activity	2.30E-03
42	GO:0004849: uridine kinase activity	2.30E-03
43	GO:0004602: glutathione peroxidase activity	2.30E-03
44	GO:0015297: antiporter activity	2.62E-03
45	GO:0102483: scopolin beta-glucosidase activity	2.75E-03
46	GO:0003993: acid phosphatase activity	4.02E-03
47	GO:0000989: transcription factor activity, transcription factor binding	4.05E-03
48	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	4.05E-03
49	GO:0071949: FAD binding	4.05E-03
50	GO:0008422: beta-glucosidase activity	4.20E-03
51	GO:0005515: protein binding	4.94E-03
52	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	5.05E-03
53	GO:0008047: enzyme activator activity	5.05E-03
54	GO:0051537: 2 iron, 2 sulfur cluster binding	5.35E-03
55	GO:0047372: acylglycerol lipase activity	5.58E-03
56	GO:0004022: alcohol dehydrogenase (NAD) activity	6.70E-03
57	GO:0005315: inorganic phosphate transmembrane transporter activity	6.70E-03
58	GO:0008266: poly(U) RNA binding	7.28E-03
59	GO:0008131: primary amine oxidase activity	7.28E-03
60	GO:0015171: amino acid transmembrane transporter activity	7.38E-03
61	GO:0005217: intracellular ligand-gated ion channel activity	7.89E-03
62	GO:0003712: transcription cofactor activity	7.89E-03
63	GO:0004970: ionotropic glutamate receptor activity	7.89E-03
64	GO:0004190: aspartic-type endopeptidase activity	7.89E-03
65	GO:0015035: protein disulfide oxidoreductase activity	9.78E-03
66	GO:0005216: ion channel activity	9.80E-03
67	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	1.05E-02
68	GO:0004707: MAP kinase activity	1.05E-02
69	GO:0008514: organic anion transmembrane transporter activity	1.26E-02
70	GO:0047134: protein-disulfide reductase activity	1.33E-02
71	GO:0005506: iron ion binding	1.48E-02
72	GO:0008536: Ran GTPase binding	1.49E-02
73	GO:0008080: N-acetyltransferase activity	1.49E-02
74	GO:0004791: thioredoxin-disulfide reductase activity	1.56E-02
75	GO:0016787: hydrolase activity	1.57E-02
76	GO:0048038: quinone binding	1.72E-02
77	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.72E-02
78	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.79E-02
79	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.89E-02
80	GO:0008375: acetylglucosaminyltransferase activity	2.42E-02
81	GO:0008168: methyltransferase activity	2.46E-02
82	GO:0003682: chromatin binding	2.70E-02
83	GO:0003677: DNA binding	2.89E-02
84	GO:0004497: monooxygenase activity	3.16E-02
85	GO:0042393: histone binding	3.52E-02
86	GO:0043621: protein self-association	4.06E-02
87	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.08E-02
88	GO:0015293: symporter activity	4.17E-02
89	GO:0005198: structural molecule activity	4.17E-02
90	GO:0005509: calcium ion binding	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0009783: photosystem II antenna complex	0.00E+00
2	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
3	GO:0010287: plastoglobule	7.36E-23
4	GO:0009534: chloroplast thylakoid	2.82E-22
5	GO:0009535: chloroplast thylakoid membrane	1.61E-21
6	GO:0009579: thylakoid	2.09E-19
7	GO:0030076: light-harvesting complex	8.94E-18
8	GO:0009522: photosystem I	1.64E-17
9	GO:0009941: chloroplast envelope	1.29E-15
10	GO:0009507: chloroplast	5.85E-11
11	GO:0009523: photosystem II	1.86E-09
12	GO:0009538: photosystem I reaction center	1.44E-08
13	GO:0009517: PSII associated light-harvesting complex II	1.05E-07
14	GO:0042651: thylakoid membrane	9.19E-07
15	GO:0016021: integral component of membrane	1.35E-06
16	GO:0016020: membrane	7.45E-06
17	GO:0031415: NatA complex	3.96E-04
18	GO:0030095: chloroplast photosystem II	4.96E-04
19	GO:0031977: thylakoid lumen	5.59E-04
20	GO:0009528: plastid inner membrane	6.47E-04
21	GO:0009654: photosystem II oxygen evolving complex	7.52E-04
22	GO:0030660: Golgi-associated vesicle membrane	1.22E-03
23	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.22E-03
24	GO:0009898: cytoplasmic side of plasma membrane	1.22E-03
25	GO:0019898: extrinsic component of membrane	1.52E-03
26	GO:0055035: plastid thylakoid membrane	1.56E-03
27	GO:0009543: chloroplast thylakoid lumen	1.84E-03
28	GO:0009533: chloroplast stromal thylakoid	2.70E-03
29	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	3.13E-03
30	GO:0010494: cytoplasmic stress granule	4.05E-03
31	GO:0005765: lysosomal membrane	5.58E-03
32	GO:0031966: mitochondrial membrane	6.21E-03
33	GO:0009570: chloroplast stroma	6.53E-03
34	GO:0009706: chloroplast inner membrane	9.49E-03
35	GO:0031410: cytoplasmic vesicle	1.12E-02
36	GO:0015629: actin cytoskeleton	1.19E-02
37	GO:0005623: cell	1.22E-02
38	GO:0000932: P-body	2.24E-02
39	GO:0009707: chloroplast outer membrane	2.71E-02
40	GO:0031969: chloroplast membrane	3.16E-02