Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G07630

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070070: proton-transporting V-type ATPase complex assembly0.00E+00
2GO:0000390: spliceosomal complex disassembly0.00E+00
3GO:0006105: succinate metabolic process0.00E+00
4GO:0032497: detection of lipopolysaccharide0.00E+00
5GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
6GO:0019484: beta-alanine catabolic process0.00E+00
7GO:0010793: regulation of mRNA export from nucleus0.00E+00
8GO:0009448: gamma-aminobutyric acid metabolic process0.00E+00
9GO:0051788: response to misfolded protein1.59E-06
10GO:0043248: proteasome assembly6.00E-05
11GO:0048544: recognition of pollen1.20E-04
12GO:0009450: gamma-aminobutyric acid catabolic process1.82E-04
13GO:0007292: female gamete generation1.82E-04
14GO:0035344: hypoxanthine transport1.82E-04
15GO:0009865: pollen tube adhesion1.82E-04
16GO:0046520: sphingoid biosynthetic process1.82E-04
17GO:0006540: glutamate decarboxylation to succinate1.82E-04
18GO:0035494: SNARE complex disassembly1.82E-04
19GO:0098721: uracil import across plasma membrane1.82E-04
20GO:0098702: adenine import across plasma membrane1.82E-04
21GO:0048455: stamen formation1.82E-04
22GO:0046167: glycerol-3-phosphate biosynthetic process1.82E-04
23GO:0035266: meristem growth1.82E-04
24GO:0098710: guanine import across plasma membrane1.82E-04
25GO:0010033: response to organic substance4.10E-04
26GO:0050684: regulation of mRNA processing4.10E-04
27GO:0006641: triglyceride metabolic process4.10E-04
28GO:0009727: detection of ethylene stimulus4.10E-04
29GO:0006212: uracil catabolic process4.10E-04
30GO:0007584: response to nutrient4.10E-04
31GO:0019483: beta-alanine biosynthetic process4.10E-04
32GO:0019441: tryptophan catabolic process to kynurenine4.10E-04
33GO:0009308: amine metabolic process4.10E-04
34GO:0045087: innate immune response4.79E-04
35GO:0002237: response to molecule of bacterial origin5.21E-04
36GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway6.69E-04
37GO:0060968: regulation of gene silencing6.69E-04
38GO:0006954: inflammatory response6.69E-04
39GO:0019563: glycerol catabolic process6.69E-04
40GO:0032784: regulation of DNA-templated transcription, elongation6.69E-04
41GO:1900140: regulation of seedling development6.69E-04
42GO:0090630: activation of GTPase activity6.69E-04
43GO:0070072: vacuolar proton-transporting V-type ATPase complex assembly9.55E-04
44GO:2001289: lipid X metabolic process9.55E-04
45GO:0070301: cellular response to hydrogen peroxide9.55E-04
46GO:0072334: UDP-galactose transmembrane transport9.55E-04
47GO:0006072: glycerol-3-phosphate metabolic process9.55E-04
48GO:0015749: monosaccharide transport9.55E-04
49GO:0006809: nitric oxide biosynthetic process9.55E-04
50GO:0009963: positive regulation of flavonoid biosynthetic process9.55E-04
51GO:0006882: cellular zinc ion homeostasis9.55E-04
52GO:0006624: vacuolar protein processing9.55E-04
53GO:0006020: inositol metabolic process9.55E-04
54GO:0048367: shoot system development1.22E-03
55GO:0006536: glutamate metabolic process1.27E-03
56GO:0010107: potassium ion import1.27E-03
57GO:0010188: response to microbial phytotoxin1.27E-03
58GO:0006878: cellular copper ion homeostasis1.27E-03
59GO:0010222: stem vascular tissue pattern formation1.27E-03
60GO:0035556: intracellular signal transduction1.46E-03
61GO:0043097: pyrimidine nucleoside salvage1.61E-03
62GO:0009737: response to abscisic acid1.69E-03
63GO:0006635: fatty acid beta-oxidation1.71E-03
64GO:0048232: male gamete generation1.98E-03
65GO:0006206: pyrimidine nucleobase metabolic process1.98E-03
66GO:0007035: vacuolar acidification1.98E-03
67GO:0050665: hydrogen peroxide biosynthetic process1.98E-03
68GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly1.98E-03
69GO:0048827: phyllome development1.98E-03
70GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.38E-03
71GO:0006694: steroid biosynthetic process2.38E-03
72GO:0048280: vesicle fusion with Golgi apparatus2.38E-03
73GO:0031930: mitochondria-nucleus signaling pathway2.38E-03
74GO:0009395: phospholipid catabolic process2.80E-03
75GO:0048528: post-embryonic root development2.80E-03
76GO:0006614: SRP-dependent cotranslational protein targeting to membrane2.80E-03
77GO:0071669: plant-type cell wall organization or biogenesis2.80E-03
78GO:0006333: chromatin assembly or disassembly2.80E-03
79GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process2.80E-03
80GO:0009061: anaerobic respiration3.24E-03
81GO:0009690: cytokinin metabolic process3.24E-03
82GO:0006605: protein targeting3.24E-03
83GO:0006491: N-glycan processing3.24E-03
84GO:0009415: response to water3.24E-03
85GO:0010078: maintenance of root meristem identity3.24E-03
86GO:0048767: root hair elongation3.36E-03
87GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.41E-03
88GO:0006499: N-terminal protein myristoylation3.53E-03
89GO:0006811: ion transport3.53E-03
90GO:0010119: regulation of stomatal movement3.70E-03
91GO:0043562: cellular response to nitrogen levels3.71E-03
92GO:0046916: cellular transition metal ion homeostasis4.20E-03
93GO:0006468: protein phosphorylation4.22E-03
94GO:0030001: metal ion transport4.61E-03
95GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway4.71E-03
96GO:0008202: steroid metabolic process4.71E-03
97GO:0009744: response to sucrose5.21E-03
98GO:0006896: Golgi to vacuole transport5.24E-03
99GO:0009688: abscisic acid biosynthetic process5.24E-03
100GO:0048829: root cap development5.24E-03
101GO:0010015: root morphogenesis5.79E-03
102GO:0043085: positive regulation of catalytic activity5.79E-03
103GO:0052544: defense response by callose deposition in cell wall5.79E-03
104GO:0010105: negative regulation of ethylene-activated signaling pathway6.35E-03
105GO:0080167: response to karrikin6.77E-03
106GO:0006829: zinc II ion transport6.94E-03
107GO:2000012: regulation of auxin polar transport6.94E-03
108GO:0009725: response to hormone6.94E-03
109GO:0006541: glutamine metabolic process7.55E-03
110GO:0009933: meristem structural organization7.55E-03
111GO:0006446: regulation of translational initiation7.55E-03
112GO:0005985: sucrose metabolic process8.18E-03
113GO:0090351: seedling development8.18E-03
114GO:0034976: response to endoplasmic reticulum stress8.82E-03
115GO:0045333: cellular respiration9.48E-03
116GO:0006825: copper ion transport1.02E-02
117GO:0009269: response to desiccation1.09E-02
118GO:0009408: response to heat1.11E-02
119GO:0030433: ubiquitin-dependent ERAD pathway1.16E-02
120GO:0048364: root development1.17E-02
121GO:0071215: cellular response to abscisic acid stimulus1.23E-02
122GO:0001944: vasculature development1.23E-02
123GO:0009625: response to insect1.23E-02
124GO:0010227: floral organ abscission1.23E-02
125GO:0009651: response to salt stress1.32E-02
126GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.38E-02
127GO:0051028: mRNA transport1.38E-02
128GO:0042147: retrograde transport, endosome to Golgi1.38E-02
129GO:0015991: ATP hydrolysis coupled proton transport1.46E-02
130GO:0042631: cellular response to water deprivation1.46E-02
131GO:0042391: regulation of membrane potential1.46E-02
132GO:0000271: polysaccharide biosynthetic process1.46E-02
133GO:0080022: primary root development1.46E-02
134GO:0010051: xylem and phloem pattern formation1.46E-02
135GO:0010118: stomatal movement1.46E-02
136GO:0010154: fruit development1.54E-02
137GO:0010182: sugar mediated signaling pathway1.54E-02
138GO:0046323: glucose import1.54E-02
139GO:0015986: ATP synthesis coupled proton transport1.62E-02
140GO:0061025: membrane fusion1.62E-02
141GO:0042752: regulation of circadian rhythm1.62E-02
142GO:0006623: protein targeting to vacuole1.70E-02
143GO:0010183: pollen tube guidance1.70E-02
144GO:0009851: auxin biosynthetic process1.70E-02
145GO:0006891: intra-Golgi vesicle-mediated transport1.79E-02
146GO:0007264: small GTPase mediated signal transduction1.87E-02
147GO:0009630: gravitropism1.87E-02
148GO:0030163: protein catabolic process1.96E-02
149GO:0071281: cellular response to iron ion1.96E-02
150GO:0010252: auxin homeostasis2.05E-02
151GO:0006914: autophagy2.05E-02
152GO:0010286: heat acclimation2.14E-02
153GO:0006904: vesicle docking involved in exocytosis2.14E-02
154GO:0071805: potassium ion transmembrane transport2.14E-02
155GO:0016310: phosphorylation2.17E-02
156GO:0009555: pollen development2.30E-02
157GO:0016126: sterol biosynthetic process2.32E-02
158GO:0010029: regulation of seed germination2.42E-02
159GO:0006974: cellular response to DNA damage stimulus2.51E-02
160GO:0009409: response to cold2.58E-02
161GO:0006888: ER to Golgi vesicle-mediated transport2.61E-02
162GO:0048573: photoperiodism, flowering2.61E-02
163GO:0006950: response to stress2.61E-02
164GO:0016049: cell growth2.71E-02
165GO:0048481: plant ovule development2.81E-02
166GO:0030244: cellulose biosynthetic process2.81E-02
167GO:0009832: plant-type cell wall biogenesis2.91E-02
168GO:0010311: lateral root formation2.91E-02
169GO:0009631: cold acclimation3.11E-02
170GO:0009723: response to ethylene3.11E-02
171GO:0006508: proteolysis3.15E-02
172GO:0006865: amino acid transport3.22E-02
173GO:0016051: carbohydrate biosynthetic process3.32E-02
174GO:0006511: ubiquitin-dependent protein catabolic process3.37E-02
175GO:0006099: tricarboxylic acid cycle3.43E-02
176GO:0046777: protein autophosphorylation3.56E-02
177GO:0006887: exocytosis3.76E-02
178GO:0006897: endocytosis3.76E-02
179GO:0051707: response to other organism3.98E-02
180GO:0009640: photomorphogenesis3.98E-02
181GO:0000209: protein polyubiquitination4.09E-02
182GO:0006886: intracellular protein transport4.11E-02
183GO:0009965: leaf morphogenesis4.32E-02
184GO:0031347: regulation of defense response4.56E-02
185GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process4.56E-02
186GO:0000165: MAPK cascade4.56E-02
187GO:0009809: lignin biosynthetic process4.92E-02
188GO:0006813: potassium ion transport4.92E-02
RankGO TermAdjusted P value
1GO:0047205: quinate O-hydroxycinnamoyltransferase activity0.00E+00
2GO:0047172: shikimate O-hydroxycinnamoyltransferase activity0.00E+00
3GO:0047787: delta4-3-oxosteroid 5beta-reductase activity0.00E+00
4GO:0019211: phosphatase activator activity0.00E+00
5GO:0017113: dihydropyrimidine dehydrogenase (NADP+) activity0.00E+00
6GO:0010293: abscisic aldehyde oxidase activity0.00E+00
7GO:0005358: high-affinity hydrogen:glucose symporter activity0.00E+00
8GO:0034387: 4-aminobutyrate:pyruvate transaminase activity0.00E+00
9GO:0004370: glycerol kinase activity0.00E+00
10GO:1990446: U1 snRNP binding0.00E+00
11GO:0001653: peptide receptor activity1.35E-05
12GO:0016301: kinase activity4.55E-05
13GO:0035671: enone reductase activity1.82E-04
14GO:0000170: sphingosine hydroxylase activity1.82E-04
15GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity1.82E-04
16GO:0046870: cadmium ion binding1.82E-04
17GO:0015208: guanine transmembrane transporter activity1.82E-04
18GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity1.82E-04
19GO:0052595: aliphatic-amine oxidase activity1.82E-04
20GO:0015294: solute:cation symporter activity1.82E-04
21GO:0003867: 4-aminobutyrate transaminase activity1.82E-04
22GO:0015207: adenine transmembrane transporter activity1.82E-04
23GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity1.82E-04
24GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity1.82E-04
25GO:0009679: hexose:proton symporter activity1.82E-04
26GO:0038199: ethylene receptor activity4.10E-04
27GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity4.10E-04
28GO:0042284: sphingolipid delta-4 desaturase activity4.10E-04
29GO:0004061: arylformamidase activity4.10E-04
30GO:0019200: carbohydrate kinase activity4.10E-04
31GO:0032791: lead ion binding4.10E-04
32GO:0005483: soluble NSF attachment protein activity6.69E-04
33GO:0005047: signal recognition particle binding6.69E-04
34GO:0019829: cation-transporting ATPase activity6.69E-04
35GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity6.69E-04
36GO:0004383: guanylate cyclase activity6.69E-04
37GO:0005524: ATP binding9.20E-04
38GO:0004108: citrate (Si)-synthase activity9.55E-04
39GO:0030527: structural constituent of chromatin9.55E-04
40GO:0051740: ethylene binding9.55E-04
41GO:0004300: enoyl-CoA hydratase activity9.55E-04
42GO:0016887: ATPase activity1.05E-03
43GO:0019905: syntaxin binding1.27E-03
44GO:0015210: uracil transmembrane transporter activity1.27E-03
45GO:0004031: aldehyde oxidase activity1.27E-03
46GO:0050302: indole-3-acetaldehyde oxidase activity1.27E-03
47GO:0016004: phospholipase activator activity1.27E-03
48GO:0009916: alternative oxidase activity1.27E-03
49GO:0004674: protein serine/threonine kinase activity1.32E-03
50GO:0004872: receptor activity1.60E-03
51GO:0005459: UDP-galactose transmembrane transporter activity1.61E-03
52GO:0015145: monosaccharide transmembrane transporter activity1.61E-03
53GO:0031593: polyubiquitin binding1.98E-03
54GO:0051117: ATPase binding1.98E-03
55GO:0036402: proteasome-activating ATPase activity1.98E-03
56GO:0008237: metallopeptidase activity2.19E-03
57GO:0051753: mannan synthase activity2.38E-03
58GO:0004849: uridine kinase activity2.38E-03
59GO:0070300: phosphatidic acid binding2.38E-03
60GO:0003730: mRNA 3'-UTR binding2.38E-03
61GO:0004525: ribonuclease III activity3.24E-03
62GO:0004222: metalloendopeptidase activity3.53E-03
63GO:0005267: potassium channel activity3.71E-03
64GO:0005375: copper ion transmembrane transporter activity3.71E-03
65GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors4.20E-03
66GO:0004743: pyruvate kinase activity4.71E-03
67GO:0047617: acyl-CoA hydrolase activity4.71E-03
68GO:0030955: potassium ion binding4.71E-03
69GO:0015020: glucuronosyltransferase activity5.24E-03
70GO:0004673: protein histidine kinase activity5.24E-03
71GO:0046961: proton-transporting ATPase activity, rotational mechanism5.79E-03
72GO:0008081: phosphoric diester hydrolase activity6.94E-03
73GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism6.94E-03
74GO:0000155: phosphorelay sensor kinase activity6.94E-03
75GO:0008131: primary amine oxidase activity7.55E-03
76GO:0031625: ubiquitin protein ligase binding7.77E-03
77GO:0030553: cGMP binding8.18E-03
78GO:0017025: TBP-class protein binding8.18E-03
79GO:0030552: cAMP binding8.18E-03
80GO:0004672: protein kinase activity8.97E-03
81GO:0005507: copper ion binding9.67E-03
82GO:0043424: protein histidine kinase binding1.02E-02
83GO:0005216: ion channel activity1.02E-02
84GO:0015079: potassium ion transmembrane transporter activity1.02E-02
85GO:0004707: MAP kinase activity1.09E-02
86GO:0004176: ATP-dependent peptidase activity1.09E-02
87GO:0019706: protein-cysteine S-palmitoyltransferase activity1.09E-02
88GO:0016779: nucleotidyltransferase activity1.16E-02
89GO:0016760: cellulose synthase (UDP-forming) activity1.23E-02
90GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.29E-02
91GO:0003756: protein disulfide isomerase activity1.31E-02
92GO:0030551: cyclic nucleotide binding1.46E-02
93GO:0005249: voltage-gated potassium channel activity1.46E-02
94GO:0015144: carbohydrate transmembrane transporter activity1.50E-02
95GO:0046873: metal ion transmembrane transporter activity1.54E-02
96GO:0005506: iron ion binding1.61E-02
97GO:0005351: sugar:proton symporter activity1.69E-02
98GO:0048038: quinone binding1.79E-02
99GO:0004197: cysteine-type endopeptidase activity1.87E-02
100GO:0000156: phosphorelay response regulator activity1.96E-02
101GO:0016759: cellulose synthase activity2.05E-02
102GO:0008375: acetylglucosaminyltransferase activity2.51E-02
103GO:0009931: calcium-dependent protein serine/threonine kinase activity2.51E-02
104GO:0030247: polysaccharide binding2.61E-02
105GO:0004683: calmodulin-dependent protein kinase activity2.61E-02
106GO:0016788: hydrolase activity, acting on ester bonds2.74E-02
107GO:0005096: GTPase activator activity2.91E-02
108GO:0050660: flavin adenine dinucleotide binding3.11E-02
109GO:0016614: oxidoreductase activity, acting on CH-OH group of donors3.11E-02
110GO:0050897: cobalt ion binding3.11E-02
111GO:0030246: carbohydrate binding3.33E-02
112GO:0004497: monooxygenase activity3.33E-02
113GO:0003993: acid phosphatase activity3.43E-02
114GO:0000149: SNARE binding3.54E-02
115GO:0005516: calmodulin binding3.82E-02
116GO:0005484: SNAP receptor activity3.98E-02
117GO:0035091: phosphatidylinositol binding4.21E-02
118GO:0051537: 2 iron, 2 sulfur cluster binding4.21E-02
RankGO TermAdjusted P value
1GO:0005785: signal recognition particle receptor complex0.00E+00
2GO:0031981: nuclear lumen0.00E+00
3GO:0071008: U2-type post-mRNA release spliceosomal complex0.00E+00
4GO:0016021: integral component of membrane1.01E-09
5GO:0005886: plasma membrane2.00E-08
6GO:0005783: endoplasmic reticulum7.81E-06
7GO:0005802: trans-Golgi network3.01E-05
8GO:0030173: integral component of Golgi membrane8.36E-05
9GO:0012510: trans-Golgi network transport vesicle membrane1.82E-04
10GO:0005794: Golgi apparatus1.93E-04
11GO:0005768: endosome2.44E-04
12GO:0008540: proteasome regulatory particle, base subcomplex2.59E-04
13GO:0005777: peroxisome3.97E-04
14GO:0005789: endoplasmic reticulum membrane8.22E-04
15GO:0005776: autophagosome1.27E-03
16GO:0016471: vacuolar proton-transporting V-type ATPase complex1.27E-03
17GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain1.61E-03
18GO:0005829: cytosol1.76E-03
19GO:0030140: trans-Golgi network transport vesicle1.98E-03
20GO:0031597: cytosolic proteasome complex2.38E-03
21GO:0031595: nuclear proteasome complex2.80E-03
22GO:0030131: clathrin adaptor complex3.24E-03
23GO:0012507: ER to Golgi transport vesicle membrane3.24E-03
24GO:0000325: plant-type vacuole3.70E-03
25GO:0005786: signal recognition particle, endoplasmic reticulum targeting3.71E-03
26GO:0031090: organelle membrane4.20E-03
27GO:0031201: SNARE complex4.80E-03
28GO:0005774: vacuolar membrane4.88E-03
29GO:0030125: clathrin vesicle coat5.24E-03
30GO:0009506: plasmodesma6.88E-03
31GO:0000502: proteasome complex7.02E-03
32GO:0030176: integral component of endoplasmic reticulum membrane8.18E-03
33GO:0010008: endosome membrane8.57E-03
34GO:0070469: respiratory chain1.02E-02
35GO:0005905: clathrin-coated pit1.09E-02
36GO:0031410: cytoplasmic vesicle1.16E-02
37GO:0005773: vacuole1.22E-02
38GO:0005770: late endosome1.54E-02
39GO:0031965: nuclear membrane1.70E-02
40GO:0000785: chromatin1.87E-02
41GO:0000145: exocyst1.87E-02
42GO:0016020: membrane1.97E-02
43GO:0000786: nucleosome3.22E-02
44GO:0031902: late endosome membrane3.76E-02
Gene type



Gene DE type





AT5G54310