co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G07240

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019484: beta-alanine catabolic process	0.00E+00
2	GO:0006480: N-terminal protein amino acid methylation	0.00E+00
3	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
4	GO:0006105: succinate metabolic process	0.00E+00
5	GO:0010378: temperature compensation of the circadian clock	0.00E+00
6	GO:0042344: indole glucosinolate catabolic process	8.95E-06
7	GO:0006020: inositol metabolic process	2.04E-05
8	GO:0000380: alternative mRNA splicing, via spliceosome	5.95E-05
9	GO:0046323: glucose import	1.73E-04
10	GO:0009865: pollen tube adhesion	2.29E-04
11	GO:0006540: glutamate decarboxylation to succinate	2.29E-04
12	GO:0032958: inositol phosphate biosynthetic process	2.29E-04
13	GO:0046167: glycerol-3-phosphate biosynthetic process	2.29E-04
14	GO:0009450: gamma-aminobutyric acid catabolic process	2.29E-04
15	GO:1990641: response to iron ion starvation	2.29E-04
16	GO:0071366: cellular response to indolebutyric acid stimulus	2.29E-04
17	GO:0006970: response to osmotic stress	3.38E-04
18	GO:0052544: defense response by callose deposition in cell wall	4.90E-04
19	GO:0030003: cellular cation homeostasis	5.10E-04
20	GO:0009257: 10-formyltetrahydrofolate biosynthetic process	5.10E-04
21	GO:0006611: protein export from nucleus	5.10E-04
22	GO:0010033: response to organic substance	5.10E-04
23	GO:0006641: triglyceride metabolic process	5.10E-04
24	GO:0006101: citrate metabolic process	5.10E-04
25	GO:0009817: defense response to fungus, incompatible interaction	5.38E-04
26	GO:0006811: ion transport	6.09E-04
27	GO:0006954: inflammatory response	8.29E-04
28	GO:0019563: glycerol catabolic process	8.29E-04
29	GO:0016255: attachment of GPI anchor to protein	8.29E-04
30	GO:0000055: ribosomal large subunit export from nucleus	8.29E-04
31	GO:0042256: mature ribosome assembly	8.29E-04
32	GO:0042542: response to hydrogen peroxide	9.46E-04
33	GO:0006882: cellular zinc ion homeostasis	1.18E-03
34	GO:0019438: aromatic compound biosynthetic process	1.18E-03
35	GO:0006624: vacuolar protein processing	1.18E-03
36	GO:0009651: response to salt stress	1.18E-03
37	GO:0006072: glycerol-3-phosphate metabolic process	1.18E-03
38	GO:0015749: monosaccharide transport	1.18E-03
39	GO:0009399: nitrogen fixation	1.18E-03
40	GO:0009113: purine nucleobase biosynthetic process	1.18E-03
41	GO:0035428: hexose transmembrane transport	1.29E-03
42	GO:0071215: cellular response to abscisic acid stimulus	1.40E-03
43	GO:0010188: response to microbial phytotoxin	1.57E-03
44	GO:0006878: cellular copper ion homeostasis	1.57E-03
45	GO:0006542: glutamine biosynthetic process	1.57E-03
46	GO:0006646: phosphatidylethanolamine biosynthetic process	1.57E-03
47	GO:0015743: malate transport	1.57E-03
48	GO:1902584: positive regulation of response to water deprivation	1.57E-03
49	GO:0006536: glutamate metabolic process	1.57E-03
50	GO:0042273: ribosomal large subunit biogenesis	1.57E-03
51	GO:0010600: regulation of auxin biosynthetic process	1.57E-03
52	GO:0046686: response to cadmium ion	1.78E-03
53	GO:0006090: pyruvate metabolic process	2.01E-03
54	GO:0043097: pyrimidine nucleoside salvage	2.01E-03
55	GO:0007029: endoplasmic reticulum organization	2.01E-03
56	GO:0048578: positive regulation of long-day photoperiodism, flowering	2.01E-03
57	GO:0048544: recognition of pollen	2.06E-03
58	GO:0080167: response to karrikin	2.17E-03
59	GO:0006635: fatty acid beta-oxidation	2.36E-03
60	GO:0006206: pyrimidine nucleobase metabolic process	2.48E-03
61	GO:0000741: karyogamy	2.48E-03
62	GO:0015691: cadmium ion transport	2.48E-03
63	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	2.48E-03
64	GO:0042732: D-xylose metabolic process	2.48E-03
65	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	2.97E-03
66	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.97E-03
67	GO:0009396: folic acid-containing compound biosynthetic process	3.50E-03
68	GO:0010044: response to aluminum ion	3.50E-03
69	GO:0009737: response to abscisic acid	3.52E-03
70	GO:0048573: photoperiodism, flowering	4.01E-03
71	GO:0032508: DNA duplex unwinding	4.06E-03
72	GO:0006102: isocitrate metabolic process	4.06E-03
73	GO:0016559: peroxisome fission	4.06E-03
74	GO:0009061: anaerobic respiration	4.06E-03
75	GO:0010928: regulation of auxin mediated signaling pathway	4.06E-03
76	GO:0009409: response to cold	4.34E-03
77	GO:0007623: circadian rhythm	4.51E-03
78	GO:0009808: lignin metabolic process	4.65E-03
79	GO:0001510: RNA methylation	4.65E-03
80	GO:0010043: response to zinc ion	5.13E-03
81	GO:0010119: regulation of stomatal movement	5.13E-03
82	GO:0046916: cellular transition metal ion homeostasis	5.27E-03
83	GO:0009051: pentose-phosphate shunt, oxidative branch	5.27E-03
84	GO:0006098: pentose-phosphate shunt	5.27E-03
85	GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	5.27E-03
86	GO:0045087: innate immune response	5.62E-03
87	GO:0006099: tricarboxylic acid cycle	5.88E-03
88	GO:0008202: steroid metabolic process	5.91E-03
89	GO:0035999: tetrahydrofolate interconversion	5.91E-03
90	GO:0006298: mismatch repair	6.58E-03
91	GO:0009970: cellular response to sulfate starvation	6.58E-03
92	GO:0006995: cellular response to nitrogen starvation	6.58E-03
93	GO:0016485: protein processing	7.28E-03
94	GO:0006816: calcium ion transport	7.28E-03
95	GO:0009682: induced systemic resistance	7.28E-03
96	GO:0042742: defense response to bacterium	8.22E-03
97	GO:0010102: lateral root morphogenesis	8.75E-03
98	GO:0006807: nitrogen compound metabolic process	8.75E-03
99	GO:0006108: malate metabolic process	8.75E-03
100	GO:2000012: regulation of auxin polar transport	8.75E-03
101	GO:0007034: vacuolar transport	9.52E-03
102	GO:0006541: glutamine metabolic process	9.52E-03
103	GO:0002237: response to molecule of bacterial origin	9.52E-03
104	GO:0009585: red, far-red light phototransduction	9.78E-03
105	GO:0007165: signal transduction	1.01E-02
106	GO:0055114: oxidation-reduction process	1.01E-02
107	GO:0019853: L-ascorbic acid biosynthetic process	1.03E-02
108	GO:0009969: xyloglucan biosynthetic process	1.03E-02
109	GO:0007031: peroxisome organization	1.03E-02
110	GO:0005985: sucrose metabolic process	1.03E-02
111	GO:0000162: tryptophan biosynthetic process	1.11E-02
112	GO:0044550: secondary metabolite biosynthetic process	1.15E-02
113	GO:0006406: mRNA export from nucleus	1.20E-02
114	GO:0006289: nucleotide-excision repair	1.20E-02
115	GO:0009695: jasmonic acid biosynthetic process	1.28E-02
116	GO:0006825: copper ion transport	1.28E-02
117	GO:0006874: cellular calcium ion homeostasis	1.28E-02
118	GO:0051260: protein homooligomerization	1.37E-02
119	GO:0031408: oxylipin biosynthetic process	1.37E-02
120	GO:0006396: RNA processing	1.44E-02
121	GO:0031348: negative regulation of defense response	1.46E-02
122	GO:0071456: cellular response to hypoxia	1.46E-02
123	GO:0019748: secondary metabolic process	1.46E-02
124	GO:0006012: galactose metabolic process	1.56E-02
125	GO:0009693: ethylene biosynthetic process	1.56E-02
126	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.75E-02
127	GO:0042391: regulation of membrane potential	1.85E-02
128	GO:0080022: primary root development	1.85E-02
129	GO:0010501: RNA secondary structure unwinding	1.85E-02
130	GO:0000413: protein peptidyl-prolyl isomerization	1.85E-02
131	GO:0010051: xylem and phloem pattern formation	1.85E-02
132	GO:0042631: cellular response to water deprivation	1.85E-02
133	GO:0010197: polar nucleus fusion	1.95E-02
134	GO:0006520: cellular amino acid metabolic process	1.95E-02
135	GO:0010154: fruit development	1.95E-02
136	GO:0006814: sodium ion transport	2.05E-02
137	GO:0042752: regulation of circadian rhythm	2.05E-02
138	GO:0009646: response to absence of light	2.05E-02
139	GO:0008654: phospholipid biosynthetic process	2.16E-02
140	GO:0010183: pollen tube guidance	2.16E-02
141	GO:0006468: protein phosphorylation	2.32E-02
142	GO:0010583: response to cyclopentenone	2.37E-02
143	GO:0010150: leaf senescence	2.42E-02
144	GO:0019760: glucosinolate metabolic process	2.60E-02
145	GO:0010286: heat acclimation	2.71E-02
146	GO:0051607: defense response to virus	2.83E-02
147	GO:0009617: response to bacterium	2.89E-02
148	GO:0001666: response to hypoxia	2.94E-02
149	GO:0010029: regulation of seed germination	3.06E-02
150	GO:0009735: response to cytokinin	3.11E-02
151	GO:0009627: systemic acquired resistance	3.19E-02
152	GO:0042128: nitrate assimilation	3.19E-02
153	GO:0006950: response to stress	3.31E-02
154	GO:0009738: abscisic acid-activated signaling pathway	3.34E-02
155	GO:0008219: cell death	3.56E-02
156	GO:0035556: intracellular signal transduction	3.72E-02
157	GO:0016310: phosphorylation	3.78E-02
158	GO:0010218: response to far red light	3.81E-02
159	GO:0009834: plant-type secondary cell wall biogenesis	3.81E-02
160	GO:0006499: N-terminal protein myristoylation	3.81E-02
161	GO:0009637: response to blue light	4.21E-02
162	GO:0009723: response to ethylene	4.32E-02
163	GO:0030001: metal ion transport	4.62E-02
164	GO:0006897: endocytosis	4.76E-02
165	GO:0005975: carbohydrate metabolic process	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
2	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
3	GO:0004370: glycerol kinase activity	0.00E+00
4	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
5	GO:0005272: sodium channel activity	0.00E+00
6	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
7	GO:0047787: delta4-3-oxosteroid 5beta-reductase activity	0.00E+00
8	GO:0009045: xylose isomerase activity	0.00E+00
9	GO:0050897: cobalt ion binding	6.09E-05
10	GO:0004525: ribonuclease III activity	2.03E-04
11	GO:0016274: protein-arginine N-methyltransferase activity	2.29E-04
12	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	2.29E-04
13	GO:0009679: hexose:proton symporter activity	2.29E-04
14	GO:0035671: enone reductase activity	2.29E-04
15	GO:0000829: inositol heptakisphosphate kinase activity	2.29E-04
16	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	2.29E-04
17	GO:0046870: cadmium ion binding	2.29E-04
18	GO:0004112: cyclic-nucleotide phosphodiesterase activity	2.29E-04
19	GO:0000828: inositol hexakisphosphate kinase activity	2.29E-04
20	GO:0003867: 4-aminobutyrate transaminase activity	2.29E-04
21	GO:0004352: glutamate dehydrogenase (NAD+) activity	5.10E-04
22	GO:0004329: formate-tetrahydrofolate ligase activity	5.10E-04
23	GO:0019200: carbohydrate kinase activity	5.10E-04
24	GO:0047209: coniferyl-alcohol glucosyltransferase activity	5.10E-04
25	GO:0004353: glutamate dehydrogenase [NAD(P)+] activity	5.10E-04
26	GO:0032791: lead ion binding	5.10E-04
27	GO:0004609: phosphatidylserine decarboxylase activity	5.10E-04
28	GO:0003994: aconitate hydratase activity	5.10E-04
29	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	5.10E-04
30	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	5.10E-04
31	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	5.10E-04
32	GO:0004839: ubiquitin activating enzyme activity	5.10E-04
33	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	5.10E-04
34	GO:0004175: endopeptidase activity	7.15E-04
35	GO:0004096: catalase activity	8.29E-04
36	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	8.29E-04
37	GO:0019829: cation-transporting ATPase activity	8.29E-04
38	GO:0017150: tRNA dihydrouridine synthase activity	8.29E-04
39	GO:0015086: cadmium ion transmembrane transporter activity	1.18E-03
40	GO:0004108: citrate (Si)-synthase activity	1.18E-03
41	GO:0043023: ribosomal large subunit binding	1.18E-03
42	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.18E-03
43	GO:0004300: enoyl-CoA hydratase activity	1.18E-03
44	GO:0048027: mRNA 5'-UTR binding	1.18E-03
45	GO:0005507: copper ion binding	1.19E-03
46	GO:0016301: kinase activity	1.34E-03
47	GO:0005253: anion channel activity	1.57E-03
48	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	1.57E-03
49	GO:0004834: tryptophan synthase activity	1.57E-03
50	GO:0004737: pyruvate decarboxylase activity	1.57E-03
51	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	1.57E-03
52	GO:0004470: malic enzyme activity	1.57E-03
53	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	2.01E-03
54	GO:0004356: glutamate-ammonia ligase activity	2.01E-03
55	GO:0015145: monosaccharide transmembrane transporter activity	2.01E-03
56	GO:0008641: small protein activating enzyme activity	2.01E-03
57	GO:0008948: oxaloacetate decarboxylase activity	2.01E-03
58	GO:0005355: glucose transmembrane transporter activity	2.06E-03
59	GO:0019137: thioglucosidase activity	2.48E-03
60	GO:0030976: thiamine pyrophosphate binding	2.48E-03
61	GO:0000293: ferric-chelate reductase activity	2.48E-03
62	GO:0005261: cation channel activity	2.97E-03
63	GO:0070300: phosphatidic acid binding	2.97E-03
64	GO:0004849: uridine kinase activity	2.97E-03
65	GO:0003950: NAD+ ADP-ribosyltransferase activity	2.97E-03
66	GO:0004620: phospholipase activity	3.50E-03
67	GO:0016831: carboxy-lyase activity	3.50E-03
68	GO:0015140: malate transmembrane transporter activity	3.50E-03
69	GO:0015144: carbohydrate transmembrane transporter activity	3.76E-03
70	GO:0004033: aldo-keto reductase (NADP) activity	4.06E-03
71	GO:0005337: nucleoside transmembrane transporter activity	4.06E-03
72	GO:0005524: ATP binding	4.31E-03
73	GO:0005351: sugar:proton symporter activity	4.38E-03
74	GO:0005375: copper ion transmembrane transporter activity	4.65E-03
75	GO:0005267: potassium channel activity	4.65E-03
76	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	5.27E-03
77	GO:0003697: single-stranded DNA binding	5.62E-03
78	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	6.12E-03
79	GO:0008422: beta-glucosidase activity	6.14E-03
80	GO:0008171: O-methyltransferase activity	6.58E-03
81	GO:0004177: aminopeptidase activity	7.28E-03
82	GO:0047372: acylglycerol lipase activity	7.28E-03
83	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	8.75E-03
84	GO:0005262: calcium channel activity	8.75E-03
85	GO:0005217: intracellular ligand-gated ion channel activity	1.03E-02
86	GO:0004970: ionotropic glutamate receptor activity	1.03E-02
87	GO:0030552: cAMP binding	1.03E-02
88	GO:0030553: cGMP binding	1.03E-02
89	GO:0043424: protein histidine kinase binding	1.28E-02
90	GO:0005216: ion channel activity	1.28E-02
91	GO:0004707: MAP kinase activity	1.37E-02
92	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.43E-02
93	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.80E-02
94	GO:0020037: heme binding	1.81E-02
95	GO:0005249: voltage-gated potassium channel activity	1.85E-02
96	GO:0030551: cyclic nucleotide binding	1.85E-02
97	GO:0004527: exonuclease activity	1.95E-02
98	GO:0004197: cysteine-type endopeptidase activity	2.37E-02
99	GO:0003684: damaged DNA binding	2.60E-02
100	GO:0005506: iron ion binding	2.63E-02
101	GO:0042802: identical protein binding	3.07E-02
102	GO:0030247: polysaccharide binding	3.31E-02
103	GO:0102483: scopolin beta-glucosidase activity	3.31E-02
104	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.43E-02
105	GO:0005096: GTPase activator activity	3.68E-02
106	GO:0008270: zinc ion binding	4.37E-02
107	GO:0051539: 4 iron, 4 sulfur cluster binding	4.62E-02
108	GO:0004497: monooxygenase activity	4.62E-02
109	GO:0004672: protein kinase activity	4.70E-02
110	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0071942: XPC complex	0.00E+00
2	GO:0000111: nucleotide-excision repair factor 2 complex	0.00E+00
3	GO:0005777: peroxisome	3.44E-08
4	GO:0005886: plasma membrane	1.75E-05
5	GO:0009506: plasmodesma	5.91E-04
6	GO:0042765: GPI-anchor transamidase complex	8.29E-04
7	GO:0000323: lytic vacuole	1.18E-03
8	GO:0005829: cytosol	1.84E-03
9	GO:0016020: membrane	2.41E-03
10	GO:0005851: eukaryotic translation initiation factor 2B complex	2.48E-03
11	GO:0000815: ESCRT III complex	2.97E-03
12	GO:0016363: nuclear matrix	2.97E-03
13	GO:0030687: preribosome, large subunit precursor	3.50E-03
14	GO:0005774: vacuolar membrane	3.64E-03
15	GO:0005773: vacuole	3.83E-03
16	GO:0030131: clathrin adaptor complex	4.06E-03
17	GO:0009705: plant-type vacuole membrane	4.51E-03
18	GO:0005779: integral component of peroxisomal membrane	4.65E-03
19	GO:0005618: cell wall	5.00E-03
20	GO:0016021: integral component of membrane	6.57E-03
21	GO:0030125: clathrin vesicle coat	6.58E-03
22	GO:0048046: apoplast	1.11E-02
23	GO:0005737: cytoplasm	1.30E-02
24	GO:0005905: clathrin-coated pit	1.37E-02
25	GO:0031965: nuclear membrane	2.16E-02
26	GO:0005778: peroxisomal membrane	2.71E-02
27	GO:0005794: Golgi apparatus	3.60E-02
28	GO:0000786: nucleosome	4.08E-02
29	GO:0005783: endoplasmic reticulum	4.25E-02