Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G07040

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010730: negative regulation of hydrogen peroxide biosynthetic process0.00E+00
2GO:0005997: xylulose metabolic process0.00E+00
3GO:0009415: response to water1.15E-07
4GO:1902000: homogentisate catabolic process1.30E-04
5GO:0009269: response to desiccation1.67E-04
6GO:0042344: indole glucosinolate catabolic process2.22E-04
7GO:0030029: actin filament-based process2.22E-04
8GO:0009072: aromatic amino acid family metabolic process2.22E-04
9GO:1901332: negative regulation of lateral root development3.25E-04
10GO:0006572: tyrosine catabolic process3.25E-04
11GO:0010601: positive regulation of auxin biosynthetic process3.25E-04
12GO:0015749: monosaccharide transport3.25E-04
13GO:0007623: circadian rhythm3.69E-04
14GO:0009409: response to cold4.09E-04
15GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain4.35E-04
16GO:0010286: heat acclimation4.47E-04
17GO:0043097: pyrimidine nucleoside salvage5.52E-04
18GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation6.76E-04
19GO:0006206: pyrimidine nucleobase metabolic process6.76E-04
20GO:0009631: cold acclimation7.44E-04
21GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity8.05E-04
22GO:0006694: steroid biosynthetic process8.05E-04
23GO:0009737: response to abscisic acid9.10E-04
24GO:0098869: cellular oxidant detoxification9.40E-04
25GO:0009395: phospholipid catabolic process9.40E-04
26GO:0048437: floral organ development9.40E-04
27GO:0009414: response to water deprivation1.26E-03
28GO:0006979: response to oxidative stress1.32E-03
29GO:0046916: cellular transition metal ion homeostasis1.38E-03
30GO:0051603: proteolysis involved in cellular protein catabolic process1.42E-03
31GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.54E-03
32GO:0006378: mRNA polyadenylation1.88E-03
33GO:0009682: induced systemic resistance1.88E-03
34GO:0052544: defense response by callose deposition in cell wall1.88E-03
35GO:0007034: vacuolar transport2.43E-03
36GO:0016575: histone deacetylation3.24E-03
37GO:0071215: cellular response to abscisic acid stimulus3.90E-03
38GO:0009617: response to bacterium3.93E-03
39GO:0010468: regulation of gene expression3.93E-03
40GO:0007165: signal transduction3.96E-03
41GO:0042631: cellular response to water deprivation4.60E-03
42GO:0046323: glucose import4.84E-03
43GO:0009556: microsporogenesis5.34E-03
44GO:0006635: fatty acid beta-oxidation5.60E-03
45GO:0009567: double fertilization forming a zygote and endosperm6.39E-03
46GO:0019760: glucosinolate metabolic process6.39E-03
47GO:0042742: defense response to bacterium6.80E-03
48GO:0016126: sterol biosynthetic process7.22E-03
49GO:0009911: positive regulation of flower development7.22E-03
50GO:0048573: photoperiodism, flowering8.09E-03
51GO:0006950: response to stress8.09E-03
52GO:0009651: response to salt stress8.16E-03
53GO:0018298: protein-chromophore linkage8.68E-03
54GO:0008219: cell death8.68E-03
55GO:0009817: defense response to fungus, incompatible interaction8.68E-03
56GO:0009408: response to heat9.31E-03
57GO:0016051: carbohydrate biosynthetic process1.02E-02
58GO:0009637: response to blue light1.02E-02
59GO:0006099: tricarboxylic acid cycle1.06E-02
60GO:0030001: metal ion transport1.12E-02
61GO:0042542: response to hydrogen peroxide1.19E-02
62GO:0009644: response to high light intensity1.30E-02
63GO:0000165: MAPK cascade1.40E-02
64GO:0035556: intracellular signal transduction1.75E-02
65GO:0009626: plant-type hypersensitive response1.78E-02
66GO:0009620: response to fungus1.82E-02
67GO:0009553: embryo sac development1.90E-02
68GO:0051726: regulation of cell cycle2.02E-02
69GO:0016310: phosphorylation2.12E-02
70GO:0006511: ubiquitin-dependent protein catabolic process2.25E-02
71GO:0009058: biosynthetic process2.37E-02
72GO:0007166: cell surface receptor signaling pathway3.15E-02
73GO:0045944: positive regulation of transcription from RNA polymerase II promoter3.71E-02
74GO:0006970: response to osmotic stress4.12E-02
75GO:0007049: cell cycle4.23E-02
76GO:0016192: vesicle-mediated transport4.73E-02
77GO:0006355: regulation of transcription, DNA-templated4.88E-02
RankGO TermAdjusted P value
1GO:0005358: high-affinity hydrogen:glucose symporter activity0.00E+00
2GO:0004334: fumarylacetoacetase activity0.00E+00
3GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity0.00E+00
4GO:0004856: xylulokinase activity5.34E-05
5GO:0009679: hexose:proton symporter activity5.34E-05
6GO:0046870: cadmium ion binding5.34E-05
7GO:0004112: cyclic-nucleotide phosphodiesterase activity5.34E-05
8GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity5.34E-05
9GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity1.30E-04
10GO:0001047: core promoter binding1.30E-04
11GO:0032791: lead ion binding1.30E-04
12GO:0047216: inositol 3-alpha-galactosyltransferase activity1.30E-04
13GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity2.22E-04
14GO:0004108: citrate (Si)-synthase activity3.25E-04
15GO:0015145: monosaccharide transmembrane transporter activity5.52E-04
16GO:0016773: phosphotransferase activity, alcohol group as acceptor5.52E-04
17GO:0019137: thioglucosidase activity6.76E-04
18GO:0004629: phospholipase C activity6.76E-04
19GO:0004849: uridine kinase activity8.05E-04
20GO:0004602: glutathione peroxidase activity8.05E-04
21GO:0004435: phosphatidylinositol phospholipase C activity8.05E-04
22GO:0009881: photoreceptor activity9.40E-04
23GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)1.23E-03
24GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.54E-03
25GO:0008081: phosphoric diester hydrolase activity2.25E-03
26GO:0015144: carbohydrate transmembrane transporter activity2.87E-03
27GO:0004407: histone deacetylase activity3.03E-03
28GO:0005351: sugar:proton symporter activity3.23E-03
29GO:0004707: MAP kinase activity3.46E-03
30GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity4.84E-03
31GO:0004197: cysteine-type endopeptidase activity5.86E-03
32GO:0005200: structural constituent of cytoskeleton6.66E-03
33GO:0004871: signal transducer activity7.91E-03
34GO:0102483: scopolin beta-glucosidase activity8.09E-03
35GO:0030247: polysaccharide binding8.09E-03
36GO:0005096: GTPase activator activity8.99E-03
37GO:0004693: cyclin-dependent protein serine/threonine kinase activity9.30E-03
38GO:0003993: acid phosphatase activity1.06E-02
39GO:0008422: beta-glucosidase activity1.09E-02
40GO:0035091: phosphatidylinositol binding1.30E-02
41GO:0008234: cysteine-type peptidase activity1.63E-02
42GO:0016758: transferase activity, transferring hexosyl groups2.24E-02
43GO:0005507: copper ion binding2.36E-02
44GO:0005509: calcium ion binding3.10E-02
45GO:0016301: kinase activity3.24E-02
46GO:0044212: transcription regulatory region DNA binding3.36E-02
47GO:0016788: hydrolase activity, acting on ester bonds3.96E-02
48GO:0004842: ubiquitin-protein transferase activity4.62E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane3.01E-05
2GO:0000323: lytic vacuole3.25E-04
3GO:0005849: mRNA cleavage factor complex3.25E-04
4GO:0000815: ESCRT III complex8.05E-04
5GO:0000307: cyclin-dependent protein kinase holoenzyme complex1.23E-03
6GO:0005764: lysosome2.43E-03
7GO:0005777: peroxisome3.31E-03
8GO:0031965: nuclear membrane5.34E-03
9GO:0005829: cytosol2.23E-02
10GO:0005623: cell2.32E-02
11GO:0005615: extracellular space3.11E-02
12GO:0005737: cytoplasm3.19E-02
Gene type



Gene DE type