GO Enrichment Analysis of Co-expressed Genes with
AT1G06720
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002188: translation reinitiation | 0.00E+00 |
| 2 | GO:0000495: box H/ACA snoRNA 3'-end processing | 0.00E+00 |
| 3 | GO:1990481: mRNA pseudouridine synthesis | 0.00E+00 |
| 4 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 5 | GO:0001732: formation of cytoplasmic translation initiation complex | 0.00E+00 |
| 6 | GO:0000470: maturation of LSU-rRNA | 1.47E-09 |
| 7 | GO:0000460: maturation of 5.8S rRNA | 3.96E-07 |
| 8 | GO:0031120: snRNA pseudouridine synthesis | 1.57E-05 |
| 9 | GO:0031118: rRNA pseudouridine synthesis | 1.57E-05 |
| 10 | GO:0006430: lysyl-tRNA aminoacylation | 1.57E-05 |
| 11 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.12E-05 |
| 12 | GO:0070475: rRNA base methylation | 7.34E-05 |
| 13 | GO:0008652: cellular amino acid biosynthetic process | 7.34E-05 |
| 14 | GO:0000973: posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery | 1.11E-04 |
| 15 | GO:0009088: threonine biosynthetic process | 2.97E-04 |
| 16 | GO:0010162: seed dormancy process | 6.38E-04 |
| 17 | GO:0009089: lysine biosynthetic process via diaminopimelate | 7.00E-04 |
| 18 | GO:0010582: floral meristem determinacy | 7.65E-04 |
| 19 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.10E-03 |
| 20 | GO:0006406: mRNA export from nucleus | 1.10E-03 |
| 21 | GO:0000027: ribosomal large subunit assembly | 1.10E-03 |
| 22 | GO:0006334: nucleosome assembly | 1.25E-03 |
| 23 | GO:0009294: DNA mediated transformation | 1.40E-03 |
| 24 | GO:0000413: protein peptidyl-prolyl isomerization | 1.65E-03 |
| 25 | GO:0006606: protein import into nucleus | 1.65E-03 |
| 26 | GO:0000154: rRNA modification | 4.60E-03 |
| 27 | GO:0006364: rRNA processing | 5.21E-03 |
| 28 | GO:0006413: translational initiation | 9.26E-03 |
| 29 | GO:0008380: RNA splicing | 1.10E-02 |
| 30 | GO:0042254: ribosome biogenesis | 1.34E-02 |
| 31 | GO:0016192: vesicle-mediated transport | 1.60E-02 |
| 32 | GO:0045892: negative regulation of transcription, DNA-templated | 1.77E-02 |
| 33 | GO:0006886: intracellular protein transport | 1.79E-02 |
| 34 | GO:0032259: methylation | 1.97E-02 |
| 35 | GO:0006457: protein folding | 3.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009982: pseudouridine synthase activity | 1.31E-05 |
| 2 | GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity | 1.57E-05 |
| 3 | GO:0042134: rRNA primary transcript binding | 1.57E-05 |
| 4 | GO:0004824: lysine-tRNA ligase activity | 1.57E-05 |
| 5 | GO:0043021: ribonucleoprotein complex binding | 4.12E-05 |
| 6 | GO:0004072: aspartate kinase activity | 1.11E-04 |
| 7 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.71E-04 |
| 8 | GO:0004017: adenylate kinase activity | 2.97E-04 |
| 9 | GO:0030515: snoRNA binding | 3.49E-04 |
| 10 | GO:0000166: nucleotide binding | 4.01E-04 |
| 11 | GO:0017056: structural constituent of nuclear pore | 4.04E-04 |
| 12 | GO:0005487: nucleocytoplasmic transporter activity | 5.76E-04 |
| 13 | GO:0001054: RNA polymerase I activity | 7.00E-04 |
| 14 | GO:0004407: histone deacetylase activity | 1.10E-03 |
| 15 | GO:0005528: FK506 binding | 1.10E-03 |
| 16 | GO:0030276: clathrin binding | 1.73E-03 |
| 17 | GO:0016597: amino acid binding | 2.45E-03 |
| 18 | GO:0042393: histone binding | 3.91E-03 |
| 19 | GO:0005198: structural molecule activity | 4.60E-03 |
| 20 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 5.21E-03 |
| 21 | GO:0005515: protein binding | 6.61E-03 |
| 22 | GO:0003743: translation initiation factor activity | 1.09E-02 |
| 23 | GO:0008168: methyltransferase activity | 1.29E-02 |
| 24 | GO:0005524: ATP binding | 3.33E-02 |
| 25 | GO:0005507: copper ion binding | 3.94E-02 |
| 26 | GO:0005509: calcium ion binding | 4.77E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071540: eukaryotic translation initiation factor 3 complex, eIF3e | 0.00E+00 |
| 2 | GO:0005730: nucleolus | 5.01E-08 |
| 3 | GO:0005829: cytosol | 2.10E-06 |
| 4 | GO:0030687: preribosome, large subunit precursor | 2.22E-06 |
| 5 | GO:0009506: plasmodesma | 4.57E-06 |
| 6 | GO:0043614: multi-eIF complex | 1.57E-05 |
| 7 | GO:0071541: eukaryotic translation initiation factor 3 complex, eIF3m | 1.57E-05 |
| 8 | GO:0070545: PeBoW complex | 4.12E-05 |
| 9 | GO:0031080: nuclear pore outer ring | 7.34E-05 |
| 10 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 9.03E-05 |
| 11 | GO:0031429: box H/ACA snoRNP complex | 1.11E-04 |
| 12 | GO:0030126: COPI vesicle coat | 1.98E-04 |
| 13 | GO:0031428: box C/D snoRNP complex | 2.47E-04 |
| 14 | GO:0005834: heterotrimeric G-protein complex | 3.94E-04 |
| 15 | GO:0005736: DNA-directed RNA polymerase I complex | 5.18E-04 |
| 16 | GO:0005852: eukaryotic translation initiation factor 3 complex | 7.00E-04 |
| 17 | GO:0032040: small-subunit processome | 7.65E-04 |
| 18 | GO:0005634: nucleus | 1.52E-03 |
| 19 | GO:0005618: cell wall | 5.43E-03 |
| 20 | GO:0005635: nuclear envelope | 5.46E-03 |
| 21 | GO:0016607: nuclear speck | 5.98E-03 |
| 22 | GO:0005654: nucleoplasm | 7.62E-03 |
| 23 | GO:0046658: anchored component of plasma membrane | 1.18E-02 |
| 24 | GO:0005774: vacuolar membrane | 2.50E-02 |
| 25 | GO:0022626: cytosolic ribosome | 2.96E-02 |
| 26 | GO:0005773: vacuole | 3.83E-02 |