GO Enrichment Analysis of Co-expressed Genes with
AT1G06000
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009264: deoxyribonucleotide catabolic process | 0.00E+00 |
| 2 | GO:1901038: cyanidin 3-O-glucoside metabolic process | 0.00E+00 |
| 3 | GO:0000024: maltose biosynthetic process | 0.00E+00 |
| 4 | GO:0010423: negative regulation of brassinosteroid biosynthetic process | 0.00E+00 |
| 5 | GO:0010157: response to chlorate | 0.00E+00 |
| 6 | GO:0009813: flavonoid biosynthetic process | 5.53E-08 |
| 7 | GO:0080167: response to karrikin | 1.28E-06 |
| 8 | GO:0051555: flavonol biosynthetic process | 1.29E-06 |
| 9 | GO:0006796: phosphate-containing compound metabolic process | 1.65E-05 |
| 10 | GO:0071461: cellular response to redox state | 8.25E-05 |
| 11 | GO:0048438: floral whorl development | 8.25E-05 |
| 12 | GO:0019605: butyrate metabolic process | 8.25E-05 |
| 13 | GO:0006083: acetate metabolic process | 8.25E-05 |
| 14 | GO:0009698: phenylpropanoid metabolic process | 1.14E-04 |
| 15 | GO:0009934: regulation of meristem structural organization | 1.75E-04 |
| 16 | GO:0080183: response to photooxidative stress | 1.97E-04 |
| 17 | GO:1900386: positive regulation of flavonol biosynthetic process | 1.97E-04 |
| 18 | GO:0071395: cellular response to jasmonic acid stimulus | 1.97E-04 |
| 19 | GO:0071158: positive regulation of cell cycle arrest | 1.97E-04 |
| 20 | GO:0019388: galactose catabolic process | 1.97E-04 |
| 21 | GO:0045717: negative regulation of fatty acid biosynthetic process | 1.97E-04 |
| 22 | GO:0010220: positive regulation of vernalization response | 1.97E-04 |
| 23 | GO:0032886: regulation of microtubule-based process | 1.97E-04 |
| 24 | GO:0010224: response to UV-B | 2.52E-04 |
| 25 | GO:0040009: regulation of growth rate | 3.29E-04 |
| 26 | GO:0006651: diacylglycerol biosynthetic process | 3.29E-04 |
| 27 | GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic | 3.29E-04 |
| 28 | GO:0035066: positive regulation of histone acetylation | 3.29E-04 |
| 29 | GO:1901562: response to paraquat | 3.29E-04 |
| 30 | GO:0010253: UDP-rhamnose biosynthetic process | 3.29E-04 |
| 31 | GO:0046417: chorismate metabolic process | 3.29E-04 |
| 32 | GO:0042780: tRNA 3'-end processing | 3.29E-04 |
| 33 | GO:0009411: response to UV | 3.63E-04 |
| 34 | GO:0042127: regulation of cell proliferation | 3.94E-04 |
| 35 | GO:0035067: negative regulation of histone acetylation | 4.75E-04 |
| 36 | GO:0009963: positive regulation of flavonoid biosynthetic process | 4.75E-04 |
| 37 | GO:0009590: detection of gravity | 4.75E-04 |
| 38 | GO:0006520: cellular amino acid metabolic process | 4.96E-04 |
| 39 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 6.09E-04 |
| 40 | GO:0045088: regulation of innate immune response | 6.32E-04 |
| 41 | GO:0034613: cellular protein localization | 6.32E-04 |
| 42 | GO:0071555: cell wall organization | 6.77E-04 |
| 43 | GO:0006097: glyoxylate cycle | 8.00E-04 |
| 44 | GO:0009435: NAD biosynthetic process | 8.00E-04 |
| 45 | GO:0071368: cellular response to cytokinin stimulus | 8.00E-04 |
| 46 | GO:0006751: glutathione catabolic process | 9.77E-04 |
| 47 | GO:0042732: D-xylose metabolic process | 9.77E-04 |
| 48 | GO:0010315: auxin efflux | 9.77E-04 |
| 49 | GO:0006559: L-phenylalanine catabolic process | 9.77E-04 |
| 50 | GO:0000060: protein import into nucleus, translocation | 9.77E-04 |
| 51 | GO:0010077: maintenance of inflorescence meristem identity | 1.16E-03 |
| 52 | GO:0010076: maintenance of floral meristem identity | 1.16E-03 |
| 53 | GO:0010218: response to far red light | 1.22E-03 |
| 54 | GO:0098869: cellular oxidant detoxification | 1.36E-03 |
| 55 | GO:0005978: glycogen biosynthetic process | 1.57E-03 |
| 56 | GO:0009704: de-etiolation | 1.57E-03 |
| 57 | GO:0009926: auxin polar transport | 1.79E-03 |
| 58 | GO:0015996: chlorophyll catabolic process | 1.79E-03 |
| 59 | GO:0009051: pentose-phosphate shunt, oxidative branch | 2.02E-03 |
| 60 | GO:0010018: far-red light signaling pathway | 2.26E-03 |
| 61 | GO:0045036: protein targeting to chloroplast | 2.51E-03 |
| 62 | GO:0009909: regulation of flower development | 2.66E-03 |
| 63 | GO:0009073: aromatic amino acid family biosynthetic process | 2.77E-03 |
| 64 | GO:0000272: polysaccharide catabolic process | 2.77E-03 |
| 65 | GO:0048229: gametophyte development | 2.77E-03 |
| 66 | GO:0005983: starch catabolic process | 3.03E-03 |
| 67 | GO:0045037: protein import into chloroplast stroma | 3.03E-03 |
| 68 | GO:0010582: floral meristem determinacy | 3.03E-03 |
| 69 | GO:0016925: protein sumoylation | 3.03E-03 |
| 70 | GO:0009718: anthocyanin-containing compound biosynthetic process | 3.31E-03 |
| 71 | GO:0006006: glucose metabolic process | 3.31E-03 |
| 72 | GO:0030154: cell differentiation | 3.59E-03 |
| 73 | GO:0010223: secondary shoot formation | 3.59E-03 |
| 74 | GO:0009733: response to auxin | 3.76E-03 |
| 75 | GO:0009225: nucleotide-sugar metabolic process | 3.88E-03 |
| 76 | GO:0034976: response to endoplasmic reticulum stress | 4.18E-03 |
| 77 | GO:0019915: lipid storage | 5.12E-03 |
| 78 | GO:0007623: circadian rhythm | 5.85E-03 |
| 79 | GO:0005975: carbohydrate metabolic process | 5.94E-03 |
| 80 | GO:0009611: response to wounding | 5.96E-03 |
| 81 | GO:0010584: pollen exine formation | 6.13E-03 |
| 82 | GO:0016117: carotenoid biosynthetic process | 6.48E-03 |
| 83 | GO:0009739: response to gibberellin | 6.54E-03 |
| 84 | GO:0008033: tRNA processing | 6.83E-03 |
| 85 | GO:0010501: RNA secondary structure unwinding | 6.83E-03 |
| 86 | GO:0006342: chromatin silencing | 7.20E-03 |
| 87 | GO:0007018: microtubule-based movement | 7.57E-03 |
| 88 | GO:0019252: starch biosynthetic process | 7.95E-03 |
| 89 | GO:0006457: protein folding | 8.04E-03 |
| 90 | GO:0002229: defense response to oomycetes | 8.33E-03 |
| 91 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 8.38E-03 |
| 92 | GO:1901657: glycosyl compound metabolic process | 9.12E-03 |
| 93 | GO:0016125: sterol metabolic process | 9.53E-03 |
| 94 | GO:0010252: auxin homeostasis | 9.53E-03 |
| 95 | GO:0042128: nitrate assimilation | 1.17E-02 |
| 96 | GO:0006950: response to stress | 1.21E-02 |
| 97 | GO:0045454: cell redox homeostasis | 1.35E-02 |
| 98 | GO:0010311: lateral root formation | 1.35E-02 |
| 99 | GO:0006811: ion transport | 1.39E-02 |
| 100 | GO:0006629: lipid metabolic process | 1.66E-02 |
| 101 | GO:0009408: response to heat | 1.66E-02 |
| 102 | GO:0006631: fatty acid metabolic process | 1.74E-02 |
| 103 | GO:0009753: response to jasmonic acid | 1.78E-02 |
| 104 | GO:0008152: metabolic process | 1.83E-02 |
| 105 | GO:0010114: response to red light | 1.84E-02 |
| 106 | GO:0000165: MAPK cascade | 2.11E-02 |
| 107 | GO:0009809: lignin biosynthetic process | 2.28E-02 |
| 108 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.33E-02 |
| 109 | GO:0009416: response to light stimulus | 2.95E-02 |
| 110 | GO:0009742: brassinosteroid mediated signaling pathway | 3.05E-02 |
| 111 | GO:0045893: positive regulation of transcription, DNA-templated | 3.39E-02 |
| 112 | GO:0009058: biosynthetic process | 3.56E-02 |
| 113 | GO:0009845: seed germination | 3.63E-02 |
| 114 | GO:0055114: oxidation-reduction process | 4.56E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045486: naringenin 3-dioxygenase activity | 0.00E+00 |
| 2 | GO:1990055: phenylacetaldehyde synthase activity | 0.00E+00 |
| 3 | GO:0044318: L-aspartate:fumarate oxidoreductase activity | 0.00E+00 |
| 4 | GO:0008734: L-aspartate oxidase activity | 0.00E+00 |
| 5 | GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity | 0.00E+00 |
| 6 | GO:0047213: anthocyanidin 3-O-glucosyltransferase activity | 0.00E+00 |
| 7 | GO:0102580: cyanidin 3-O-glucoside 2-O''-xylosyltransferase activity | 0.00E+00 |
| 8 | GO:0045430: chalcone isomerase activity | 6.47E-06 |
| 9 | GO:0016757: transferase activity, transferring glycosyl groups | 1.44E-05 |
| 10 | GO:0102229: amylopectin maltohydrolase activity | 1.65E-05 |
| 11 | GO:0016161: beta-amylase activity | 2.36E-05 |
| 12 | GO:0004427: inorganic diphosphatase activity | 3.21E-05 |
| 13 | GO:0016759: cellulose synthase activity | 3.92E-05 |
| 14 | GO:0004837: tyrosine decarboxylase activity | 8.25E-05 |
| 15 | GO:0003987: acetate-CoA ligase activity | 8.25E-05 |
| 16 | GO:0047760: butyrate-CoA ligase activity | 8.25E-05 |
| 17 | GO:0046982: protein heterodimerization activity | 1.66E-04 |
| 18 | GO:0004566: beta-glucuronidase activity | 1.97E-04 |
| 19 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.97E-04 |
| 20 | GO:0008460: dTDP-glucose 4,6-dehydratase activity | 1.97E-04 |
| 21 | GO:0003839: gamma-glutamylcyclotransferase activity | 1.97E-04 |
| 22 | GO:0010280: UDP-L-rhamnose synthase activity | 1.97E-04 |
| 23 | GO:0050377: UDP-glucose 4,6-dehydratase activity | 1.97E-04 |
| 24 | GO:0004106: chorismate mutase activity | 1.97E-04 |
| 25 | GO:0004614: phosphoglucomutase activity | 1.97E-04 |
| 26 | GO:0031418: L-ascorbic acid binding | 2.48E-04 |
| 27 | GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity | 3.29E-04 |
| 28 | GO:0042781: 3'-tRNA processing endoribonuclease activity | 3.29E-04 |
| 29 | GO:0008253: 5'-nucleotidase activity | 3.29E-04 |
| 30 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.41E-04 |
| 31 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.41E-04 |
| 32 | GO:0017057: 6-phosphogluconolactonase activity | 4.75E-04 |
| 33 | GO:0046527: glucosyltransferase activity | 6.32E-04 |
| 34 | GO:0045431: flavonol synthase activity | 8.00E-04 |
| 35 | GO:0031386: protein tag | 8.00E-04 |
| 36 | GO:0008194: UDP-glycosyltransferase activity | 8.79E-04 |
| 37 | GO:0016208: AMP binding | 9.77E-04 |
| 38 | GO:0016462: pyrophosphatase activity | 9.77E-04 |
| 39 | GO:0035252: UDP-xylosyltransferase activity | 9.77E-04 |
| 40 | GO:0016688: L-ascorbate peroxidase activity | 9.77E-04 |
| 41 | GO:0008195: phosphatidate phosphatase activity | 1.16E-03 |
| 42 | GO:0000287: magnesium ion binding | 1.28E-03 |
| 43 | GO:0102425: myricetin 3-O-glucosyltransferase activity | 1.36E-03 |
| 44 | GO:0102360: daphnetin 3-O-glucosyltransferase activity | 1.36E-03 |
| 45 | GO:0016621: cinnamoyl-CoA reductase activity | 1.36E-03 |
| 46 | GO:0047893: flavonol 3-O-glucosyltransferase activity | 1.57E-03 |
| 47 | GO:0016207: 4-coumarate-CoA ligase activity | 2.02E-03 |
| 48 | GO:0009672: auxin:proton symporter activity | 2.26E-03 |
| 49 | GO:0047372: acylglycerol lipase activity | 2.77E-03 |
| 50 | GO:0004860: protein kinase inhibitor activity | 2.77E-03 |
| 51 | GO:0010329: auxin efflux transmembrane transporter activity | 3.31E-03 |
| 52 | GO:0051082: unfolded protein binding | 3.40E-03 |
| 53 | GO:0030170: pyridoxal phosphate binding | 4.71E-03 |
| 54 | GO:0035251: UDP-glucosyltransferase activity | 5.12E-03 |
| 55 | GO:0003756: protein disulfide isomerase activity | 6.13E-03 |
| 56 | GO:0003713: transcription coactivator activity | 7.20E-03 |
| 57 | GO:0016853: isomerase activity | 7.57E-03 |
| 58 | GO:0004197: cysteine-type endopeptidase activity | 8.73E-03 |
| 59 | GO:0008483: transaminase activity | 9.94E-03 |
| 60 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.21E-02 |
| 61 | GO:0102483: scopolin beta-glucosidase activity | 1.21E-02 |
| 62 | GO:0004004: ATP-dependent RNA helicase activity | 1.21E-02 |
| 63 | GO:0042803: protein homodimerization activity | 1.41E-02 |
| 64 | GO:0003824: catalytic activity | 1.60E-02 |
| 65 | GO:0008422: beta-glucosidase activity | 1.64E-02 |
| 66 | GO:0016491: oxidoreductase activity | 2.01E-02 |
| 67 | GO:0003677: DNA binding | 2.24E-02 |
| 68 | GO:0003777: microtubule motor activity | 2.45E-02 |
| 69 | GO:0008234: cysteine-type peptidase activity | 2.45E-02 |
| 70 | GO:0016887: ATPase activity | 2.58E-02 |
| 71 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.62E-02 |
| 72 | GO:0004650: polygalacturonase activity | 2.74E-02 |
| 73 | GO:0016874: ligase activity | 2.80E-02 |
| 74 | GO:0008026: ATP-dependent helicase activity | 3.05E-02 |
| 75 | GO:0016758: transferase activity, transferring hexosyl groups | 3.37E-02 |
| 76 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.50E-02 |
| 77 | GO:0016740: transferase activity | 3.60E-02 |
| 78 | GO:0016829: lyase activity | 3.63E-02 |
| 79 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.76E-02 |
| 80 | GO:0008017: microtubule binding | 4.46E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031436: BRCA1-BARD1 complex | 8.25E-05 |
| 2 | GO:0009507: chloroplast | 1.19E-04 |
| 3 | GO:0042406: extrinsic component of endoplasmic reticulum membrane | 3.29E-04 |
| 4 | GO:0070531: BRCA1-A complex | 3.29E-04 |
| 5 | GO:0005765: lysosomal membrane | 2.77E-03 |
| 6 | GO:0009941: chloroplast envelope | 2.98E-03 |
| 7 | GO:0043231: intracellular membrane-bounded organelle | 3.17E-03 |
| 8 | GO:0009574: preprophase band | 3.31E-03 |
| 9 | GO:0005764: lysosome | 3.59E-03 |
| 10 | GO:0009536: plastid | 4.30E-03 |
| 11 | GO:0005623: cell | 4.36E-03 |
| 12 | GO:0009532: plastid stroma | 5.12E-03 |
| 13 | GO:0009570: chloroplast stroma | 5.74E-03 |
| 14 | GO:0000790: nuclear chromatin | 6.48E-03 |
| 15 | GO:0005871: kinesin complex | 6.48E-03 |
| 16 | GO:0010319: stromule | 9.94E-03 |
| 17 | GO:0005788: endoplasmic reticulum lumen | 1.12E-02 |
| 18 | GO:0000786: nucleosome | 1.49E-02 |
| 19 | GO:0005794: Golgi apparatus | 1.54E-02 |
| 20 | GO:0005783: endoplasmic reticulum | 1.99E-02 |
| 21 | GO:0000139: Golgi membrane | 2.08E-02 |
| 22 | GO:0010287: plastoglobule | 3.30E-02 |
| 23 | GO:0005777: peroxisome | 3.39E-02 |
| 24 | GO:0009579: thylakoid | 3.53E-02 |
| 25 | GO:0009705: plant-type vacuole membrane | 4.32E-02 |
| 26 | GO:0031225: anchored component of membrane | 4.59E-02 |
| 27 | GO:0005615: extracellular space | 4.67E-02 |