co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G05960

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1903798: regulation of production of miRNAs involved in gene silencing by miRNA	0.00E+00
2	GO:0006560: proline metabolic process	2.75E-06
3	GO:1900036: positive regulation of cellular response to heat	2.75E-06
4	GO:1990641: response to iron ion starvation	2.75E-06
5	GO:0006101: citrate metabolic process	7.70E-06
6	GO:0010133: proline catabolic process to glutamate	7.70E-06
7	GO:0006888: ER to Golgi vesicle-mediated transport	1.03E-05
8	GO:0043044: ATP-dependent chromatin remodeling	1.45E-05
9	GO:0006097: glyoxylate cycle	4.33E-05
10	GO:0000380: alternative mRNA splicing, via spliceosome	4.33E-05
11	GO:0010199: organ boundary specification between lateral organs and the meristem	6.80E-05
12	GO:0010050: vegetative phase change	8.18E-05
13	GO:0040029: regulation of gene expression, epigenetic	9.62E-05
14	GO:0006102: isocitrate metabolic process	9.62E-05
15	GO:0009932: cell tip growth	1.11E-04
16	GO:0072593: reactive oxygen species metabolic process	1.78E-04
17	GO:0030036: actin cytoskeleton organization	2.14E-04
18	GO:0010143: cutin biosynthetic process	2.33E-04
19	GO:0010053: root epidermal cell differentiation	2.52E-04
20	GO:0010025: wax biosynthetic process	2.71E-04
21	GO:0009832: plant-type cell wall biogenesis	8.20E-04
22	GO:0006499: N-terminal protein myristoylation	8.45E-04
23	GO:0006099: tricarboxylic acid cycle	9.50E-04
24	GO:0006631: fatty acid metabolic process	1.03E-03
25	GO:0016569: covalent chromatin modification	1.59E-03
26	GO:0000398: mRNA splicing, via spliceosome	1.83E-03
27	GO:0006633: fatty acid biosynthetic process	2.24E-03
28	GO:0016192: vesicle-mediated transport	3.84E-03
29	GO:0006886: intracellular protein transport	4.29E-03
30	GO:0006979: response to oxidative stress	1.19E-02
31	GO:0046686: response to cadmium ion	1.62E-02
32	GO:0007275: multicellular organism development	1.91E-02
33	GO:0009651: response to salt stress	2.80E-02

Rank	GO Term	Adjusted P value
1	GO:0003842: 1-pyrroline-5-carboxylate dehydrogenase activity	0.00E+00
2	GO:0031957: very long-chain fatty acid-CoA ligase activity	2.75E-06
3	GO:0030623: U5 snRNA binding	2.75E-06
4	GO:0003994: aconitate hydratase activity	7.70E-06
5	GO:0017070: U6 snRNA binding	4.33E-05
6	GO:0102391: decanoate--CoA ligase activity	6.80E-05
7	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	6.80E-05
8	GO:0004467: long-chain fatty acid-CoA ligase activity	8.18E-05
9	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	1.44E-04
10	GO:0008094: DNA-dependent ATPase activity	3.32E-04
11	GO:0030276: clathrin binding	4.60E-04
12	GO:0050897: cobalt ion binding	8.71E-04
13	GO:0051539: 4 iron, 4 sulfur cluster binding	1.00E-03
14	GO:0005198: structural molecule activity	1.17E-03
15	GO:0004386: helicase activity	1.76E-03
16	GO:0008565: protein transporter activity	2.17E-03
17	GO:0003682: chromatin binding	3.33E-03
18	GO:0005507: copper ion binding	9.21E-03
19	GO:0005525: GTP binding	1.02E-02
20	GO:0005509: calcium ion binding	1.11E-02
21	GO:0005215: transporter activity	1.27E-02
22	GO:0005524: ATP binding	1.68E-02
23	GO:0016787: hydrolase activity	2.03E-02

Rank	GO Term	Adjusted P value
1	GO:0030126: COPI vesicle coat	4.33E-05
2	GO:0030131: clathrin adaptor complex	9.62E-05
3	GO:0030665: clathrin-coated vesicle membrane	1.44E-04
4	GO:0000139: Golgi membrane	1.23E-03
5	GO:0005681: spliceosomal complex	1.47E-03
6	GO:0005829: cytosol	1.95E-03
7	GO:0005759: mitochondrial matrix	2.24E-03
8	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.41E-03
9	GO:0005783: endoplasmic reticulum	6.15E-03
10	GO:0005789: endoplasmic reticulum membrane	1.59E-02
11	GO:0005774: vacuolar membrane	2.86E-02
12	GO:0009507: chloroplast	2.87E-02
13	GO:0005634: nucleus	3.80E-02
14	GO:0016020: membrane	4.73E-02