co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G05300

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080053: response to phenylalanine	0.00E+00
2	GO:0006983: ER overload response	0.00E+00
3	GO:0033587: shikimate biosynthetic process	0.00E+00
4	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
5	GO:0006182: cGMP biosynthetic process	0.00E+00
6	GO:0006592: ornithine biosynthetic process	0.00E+00
7	GO:0043201: response to leucine	0.00E+00
8	GO:0080052: response to histidine	0.00E+00
9	GO:0043066: negative regulation of apoptotic process	2.61E-06
10	GO:0071456: cellular response to hypoxia	3.59E-06
11	GO:0042742: defense response to bacterium	5.88E-06
12	GO:1903648: positive regulation of chlorophyll catabolic process	2.36E-04
13	GO:0060627: regulation of vesicle-mediated transport	2.36E-04
14	GO:1990641: response to iron ion starvation	2.36E-04
15	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	2.36E-04
16	GO:0010036: response to boron-containing substance	2.36E-04
17	GO:0010184: cytokinin transport	2.36E-04
18	GO:0010120: camalexin biosynthetic process	2.63E-04
19	GO:0006468: protein phosphorylation	2.66E-04
20	GO:0080026: response to indolebutyric acid	5.24E-04
21	GO:0060919: auxin influx	5.24E-04
22	GO:0006101: citrate metabolic process	5.24E-04
23	GO:0019483: beta-alanine biosynthetic process	5.24E-04
24	GO:0042939: tripeptide transport	5.24E-04
25	GO:0009866: induced systemic resistance, ethylene mediated signaling pathway	5.24E-04
26	GO:0080029: cellular response to boron-containing substance levels	5.24E-04
27	GO:0006212: uracil catabolic process	5.24E-04
28	GO:0055073: cadmium ion homeostasis	5.24E-04
29	GO:0009817: defense response to fungus, incompatible interaction	5.68E-04
30	GO:0010359: regulation of anion channel activity	8.52E-04
31	GO:0051176: positive regulation of sulfur metabolic process	8.52E-04
32	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	8.52E-04
33	GO:0015700: arsenite transport	1.21E-03
34	GO:0080024: indolebutyric acid metabolic process	1.21E-03
35	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.21E-03
36	GO:0046713: borate transport	1.21E-03
37	GO:0006107: oxaloacetate metabolic process	1.21E-03
38	GO:0072334: UDP-galactose transmembrane transport	1.21E-03
39	GO:0071585: detoxification of cadmium ion	1.62E-03
40	GO:0006734: NADH metabolic process	1.62E-03
41	GO:0080142: regulation of salicylic acid biosynthetic process	1.62E-03
42	GO:0042938: dipeptide transport	1.62E-03
43	GO:0006536: glutamate metabolic process	1.62E-03
44	GO:0006952: defense response	1.83E-03
45	GO:0000304: response to singlet oxygen	2.07E-03
46	GO:0009697: salicylic acid biosynthetic process	2.07E-03
47	GO:0006097: glyoxylate cycle	2.07E-03
48	GO:0002229: defense response to oomycetes	2.47E-03
49	GO:1902456: regulation of stomatal opening	2.55E-03
50	GO:1900425: negative regulation of defense response to bacterium	2.55E-03
51	GO:0006561: proline biosynthetic process	2.55E-03
52	GO:0010256: endomembrane system organization	2.55E-03
53	GO:0010315: auxin efflux	2.55E-03
54	GO:0009630: gravitropism	2.63E-03
55	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	3.61E-03
56	GO:1900057: positive regulation of leaf senescence	3.61E-03
57	GO:1902074: response to salt	3.61E-03
58	GO:0009395: phospholipid catabolic process	3.61E-03
59	GO:0043090: amino acid import	3.61E-03
60	GO:1900056: negative regulation of leaf senescence	3.61E-03
61	GO:0009627: systemic acquired resistance	3.97E-03
62	GO:0030091: protein repair	4.19E-03
63	GO:0019375: galactolipid biosynthetic process	4.19E-03
64	GO:0006102: isocitrate metabolic process	4.19E-03
65	GO:0009061: anaerobic respiration	4.19E-03
66	GO:0009819: drought recovery	4.19E-03
67	GO:0010150: leaf senescence	4.76E-03
68	GO:0006526: arginine biosynthetic process	4.79E-03
69	GO:0010204: defense response signaling pathway, resistance gene-independent	4.79E-03
70	GO:0043562: cellular response to nitrogen levels	4.79E-03
71	GO:0022900: electron transport chain	4.79E-03
72	GO:0048767: root hair elongation	4.87E-03
73	GO:0009407: toxin catabolic process	5.11E-03
74	GO:0009821: alkaloid biosynthetic process	5.43E-03
75	GO:0090333: regulation of stomatal closure	5.43E-03
76	GO:0046916: cellular transition metal ion homeostasis	5.43E-03
77	GO:0010112: regulation of systemic acquired resistance	5.43E-03
78	GO:0046685: response to arsenic-containing substance	5.43E-03
79	GO:0006098: pentose-phosphate shunt	5.43E-03
80	GO:0007166: cell surface receptor signaling pathway	5.65E-03
81	GO:0009617: response to bacterium	5.97E-03
82	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.09E-03
83	GO:0006099: tricarboxylic acid cycle	6.14E-03
84	GO:0009870: defense response signaling pathway, resistance gene-dependent	6.78E-03
85	GO:0006032: chitin catabolic process	6.78E-03
86	GO:0009688: abscisic acid biosynthetic process	6.78E-03
87	GO:0043069: negative regulation of programmed cell death	6.78E-03
88	GO:0010162: seed dormancy process	6.78E-03
89	GO:0006995: cellular response to nitrogen starvation	6.78E-03
90	GO:0009089: lysine biosynthetic process via diaminopimelate	7.50E-03
91	GO:0000038: very long-chain fatty acid metabolic process	7.50E-03
92	GO:0009682: induced systemic resistance	7.50E-03
93	GO:0052544: defense response by callose deposition in cell wall	7.50E-03
94	GO:0051707: response to other organism	7.57E-03
95	GO:0006790: sulfur compound metabolic process	8.25E-03
96	GO:0009636: response to toxic substance	8.51E-03
97	GO:0006855: drug transmembrane transport	8.84E-03
98	GO:0006807: nitrogen compound metabolic process	9.02E-03
99	GO:0006108: malate metabolic process	9.02E-03
100	GO:0018107: peptidyl-threonine phosphorylation	9.02E-03
101	GO:0055046: microgametogenesis	9.02E-03
102	GO:0009718: anthocyanin-containing compound biosynthetic process	9.02E-03
103	GO:0009738: abscisic acid-activated signaling pathway	9.52E-03
104	GO:0042538: hyperosmotic salinity response	9.52E-03
105	GO:0010540: basipetal auxin transport	9.82E-03
106	GO:0002237: response to molecule of bacterial origin	9.82E-03
107	GO:0009809: lignin biosynthetic process	1.02E-02
108	GO:0070588: calcium ion transmembrane transport	1.06E-02
109	GO:0046854: phosphatidylinositol phosphorylation	1.06E-02
110	GO:0010053: root epidermal cell differentiation	1.06E-02
111	GO:0006863: purine nucleobase transport	1.15E-02
112	GO:0000162: tryptophan biosynthetic process	1.15E-02
113	GO:0046777: protein autophosphorylation	1.19E-02
114	GO:2000377: regulation of reactive oxygen species metabolic process	1.24E-02
115	GO:0005992: trehalose biosynthetic process	1.24E-02
116	GO:0006874: cellular calcium ion homeostasis	1.32E-02
117	GO:0009620: response to fungus	1.33E-02
118	GO:0016998: cell wall macromolecule catabolic process	1.42E-02
119	GO:0018105: peptidyl-serine phosphorylation	1.50E-02
120	GO:0016226: iron-sulfur cluster assembly	1.51E-02
121	GO:0010227: floral organ abscission	1.61E-02
122	GO:0006012: galactose metabolic process	1.61E-02
123	GO:0009561: megagametogenesis	1.70E-02
124	GO:0016042: lipid catabolic process	1.73E-02
125	GO:0009751: response to salicylic acid	1.76E-02
126	GO:0046686: response to cadmium ion	1.90E-02
127	GO:0042391: regulation of membrane potential	1.91E-02
128	GO:0042631: cellular response to water deprivation	1.91E-02
129	GO:0009851: auxin biosynthetic process	2.23E-02
130	GO:0000302: response to reactive oxygen species	2.34E-02
131	GO:0009816: defense response to bacterium, incompatible interaction	3.16E-02
132	GO:0009607: response to biotic stimulus	3.16E-02
133	GO:0009737: response to abscisic acid	3.22E-02
134	GO:0009735: response to cytokinin	3.28E-02
135	GO:0006950: response to stress	3.41E-02
136	GO:0016311: dephosphorylation	3.54E-02
137	GO:0008219: cell death	3.67E-02
138	GO:0009813: flavonoid biosynthetic process	3.80E-02
139	GO:0035556: intracellular signal transduction	3.92E-02
140	GO:0010119: regulation of stomatal movement	4.07E-02
141	GO:0010043: response to zinc ion	4.07E-02
142	GO:0006865: amino acid transport	4.20E-02
143	GO:0009853: photorespiration	4.34E-02
144	GO:0045893: positive regulation of transcription, DNA-templated	4.34E-02
145	GO:0030001: metal ion transport	4.76E-02
146	GO:0080167: response to karrikin	4.82E-02
147	GO:0006631: fatty acid metabolic process	4.90E-02
148	GO:0010200: response to chitin	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
2	GO:0008777: acetylornithine deacetylase activity	0.00E+00
3	GO:0015211: purine nucleoside transmembrane transporter activity	0.00E+00
4	GO:0035885: exochitinase activity	0.00E+00
5	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
6	GO:0080138: borate uptake transmembrane transporter activity	0.00E+00
7	GO:1990837: sequence-specific double-stranded DNA binding	0.00E+00
8	GO:0003837: beta-ureidopropionase activity	0.00E+00
9	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
10	GO:0008843: endochitinase activity	0.00E+00
11	GO:0016301: kinase activity	9.34E-06
12	GO:0004674: protein serine/threonine kinase activity	4.21E-05
13	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	2.36E-04
14	GO:0010285: L,L-diaminopimelate aminotransferase activity	2.36E-04
15	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	2.36E-04
16	GO:0033984: indole-3-glycerol-phosphate lyase activity	2.36E-04
17	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	2.36E-04
18	GO:0005516: calmodulin binding	3.81E-04
19	GO:0042937: tripeptide transporter activity	5.24E-04
20	GO:0015105: arsenite transmembrane transporter activity	5.24E-04
21	GO:0003994: aconitate hydratase activity	5.24E-04
22	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	8.52E-04
23	GO:0004383: guanylate cyclase activity	8.52E-04
24	GO:0000975: regulatory region DNA binding	8.52E-04
25	GO:0004364: glutathione transferase activity	9.97E-04
26	GO:0046715: borate transmembrane transporter activity	1.21E-03
27	GO:0004351: glutamate decarboxylase activity	1.21E-03
28	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.59E-03
29	GO:0004834: tryptophan synthase activity	1.62E-03
30	GO:0042936: dipeptide transporter activity	1.62E-03
31	GO:0010328: auxin influx transmembrane transporter activity	1.62E-03
32	GO:0005496: steroid binding	2.07E-03
33	GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity	2.07E-03
34	GO:0045431: flavonol synthase activity	2.07E-03
35	GO:0005459: UDP-galactose transmembrane transporter activity	2.07E-03
36	GO:0050660: flavin adenine dinucleotide binding	2.08E-03
37	GO:0016615: malate dehydrogenase activity	2.55E-03
38	GO:0004526: ribonuclease P activity	2.55E-03
39	GO:0030060: L-malate dehydrogenase activity	3.06E-03
40	GO:0003978: UDP-glucose 4-epimerase activity	3.06E-03
41	GO:0004602: glutathione peroxidase activity	3.06E-03
42	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	3.06E-03
43	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	3.06E-03
44	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.06E-03
45	GO:0051213: dioxygenase activity	3.56E-03
46	GO:0102425: myricetin 3-O-glucosyltransferase activity	3.61E-03
47	GO:0102360: daphnetin 3-O-glucosyltransferase activity	3.61E-03
48	GO:0008121: ubiquinol-cytochrome-c reductase activity	3.61E-03
49	GO:0030247: polysaccharide binding	4.19E-03
50	GO:0047893: flavonol 3-O-glucosyltransferase activity	4.19E-03
51	GO:0046914: transition metal ion binding	4.79E-03
52	GO:0004630: phospholipase D activity	4.79E-03
53	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	4.79E-03
54	GO:0015238: drug transmembrane transporter activity	4.87E-03
55	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	5.36E-03
56	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	5.87E-03
57	GO:0050661: NADP binding	6.69E-03
58	GO:0008171: O-methyltransferase activity	6.78E-03
59	GO:0008047: enzyme activator activity	6.78E-03
60	GO:0004713: protein tyrosine kinase activity	6.78E-03
61	GO:0001054: RNA polymerase I activity	7.50E-03
62	GO:0008559: xenobiotic-transporting ATPase activity	7.50E-03
63	GO:0005509: calcium ion binding	7.70E-03
64	GO:0001056: RNA polymerase III activity	8.25E-03
65	GO:0010329: auxin efflux transmembrane transporter activity	9.02E-03
66	GO:0005388: calcium-transporting ATPase activity	9.02E-03
67	GO:0005217: intracellular ligand-gated ion channel activity	1.06E-02
68	GO:0008061: chitin binding	1.06E-02
69	GO:0004970: ionotropic glutamate receptor activity	1.06E-02
70	GO:0016298: lipase activity	1.06E-02
71	GO:0030552: cAMP binding	1.06E-02
72	GO:0030553: cGMP binding	1.06E-02
73	GO:0045735: nutrient reservoir activity	1.21E-02
74	GO:0005216: ion channel activity	1.32E-02
75	GO:0005345: purine nucleobase transmembrane transporter activity	1.32E-02
76	GO:0035251: UDP-glucosyltransferase activity	1.42E-02
77	GO:0015035: protein disulfide oxidoreductase activity	1.50E-02
78	GO:0030246: carbohydrate binding	1.57E-02
79	GO:0005524: ATP binding	1.71E-02
80	GO:0005249: voltage-gated potassium channel activity	1.91E-02
81	GO:0030551: cyclic nucleotide binding	1.91E-02
82	GO:0009055: electron carrier activity	1.96E-02
83	GO:0003713: transcription coactivator activity	2.01E-02
84	GO:0030170: pyridoxal phosphate binding	2.03E-02
85	GO:0046872: metal ion binding	2.04E-02
86	GO:0015297: antiporter activity	2.41E-02
87	GO:0008237: metallopeptidase activity	2.80E-02
88	GO:0008483: transaminase activity	2.80E-02
89	GO:0016597: amino acid binding	2.92E-02
90	GO:0015250: water channel activity	3.04E-02
91	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.29E-02
92	GO:0004683: calmodulin-dependent protein kinase activity	3.41E-02
93	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.54E-02
94	GO:0030145: manganese ion binding	4.07E-02
95	GO:0016491: oxidoreductase activity	4.28E-02
96	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.62E-02
97	GO:0051539: 4 iron, 4 sulfur cluster binding	4.76E-02
98	GO:0004497: monooxygenase activity	4.82E-02
99	GO:0004672: protein kinase activity	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	2.57E-04
2	GO:0016021: integral component of membrane	7.61E-04
3	GO:0016328: lateral plasma membrane	8.52E-04
4	GO:0030173: integral component of Golgi membrane	3.06E-03
5	GO:0005736: DNA-directed RNA polymerase I complex	5.43E-03
6	GO:0005666: DNA-directed RNA polymerase III complex	6.09E-03
7	GO:0005887: integral component of plasma membrane	6.67E-03
8	GO:0016602: CCAAT-binding factor complex	9.02E-03
9	GO:0031966: mitochondrial membrane	9.52E-03
10	GO:0005750: mitochondrial respiratory chain complex III	9.82E-03
11	GO:0030176: integral component of endoplasmic reticulum membrane	1.06E-02
12	GO:0045271: respiratory chain complex I	1.32E-02
13	GO:0005770: late endosome	2.01E-02
14	GO:0000325: plant-type vacuole	4.07E-02
15	GO:0005777: peroxisome	4.34E-02
16	GO:0005783: endoplasmic reticulum	4.63E-02
17	GO:0005829: cytosol	4.83E-02
18	GO:0031902: late endosome membrane	4.90E-02