co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G05200

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070070: proton-transporting V-type ATPase complex assembly	0.00E+00
2	GO:0010203: response to very low fluence red light stimulus	0.00E+00
3	GO:0042906: xanthine transport	0.00E+00
4	GO:1900490: positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity	0.00E+00
5	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
6	GO:1903428: positive regulation of reactive oxygen species biosynthetic process	0.00E+00
7	GO:0018298: protein-chromophore linkage	1.98E-09
8	GO:0009768: photosynthesis, light harvesting in photosystem I	1.84E-07
9	GO:0009645: response to low light intensity stimulus	3.74E-07
10	GO:0010218: response to far red light	6.09E-06
11	GO:0009637: response to blue light	8.21E-06
12	GO:0010161: red light signaling pathway	4.66E-05
13	GO:0010362: negative regulation of anion channel activity by blue light	1.04E-04
14	GO:0018002: N-terminal peptidyl-glutamic acid acetylation	1.04E-04
15	GO:0015812: gamma-aminobutyric acid transport	1.04E-04
16	GO:0032958: inositol phosphate biosynthetic process	1.04E-04
17	GO:0006475: internal protein amino acid acetylation	1.04E-04
18	GO:0006474: N-terminal protein amino acid acetylation	1.04E-04
19	GO:0017198: N-terminal peptidyl-serine acetylation	1.04E-04
20	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	1.04E-04
21	GO:0009638: phototropism	1.15E-04
22	GO:0009817: defense response to fungus, incompatible interaction	1.23E-04
23	GO:0015857: uracil transport	2.44E-04
24	GO:0030259: lipid glycosylation	2.44E-04
25	GO:0015720: allantoin transport	2.44E-04
26	GO:0010155: regulation of proton transport	2.44E-04
27	GO:0010114: response to red light	2.45E-04
28	GO:0009644: response to high light intensity	2.73E-04
29	GO:1902448: positive regulation of shade avoidance	4.05E-04
30	GO:0071705: nitrogen compound transport	4.05E-04
31	GO:0017006: protein-tetrapyrrole linkage	4.05E-04
32	GO:0090153: regulation of sphingolipid biosynthetic process	4.05E-04
33	GO:0090630: activation of GTPase activity	4.05E-04
34	GO:0072661: protein targeting to plasma membrane	4.05E-04
35	GO:0045836: positive regulation of meiotic nuclear division	4.05E-04
36	GO:0010017: red or far-red light signaling pathway	4.52E-04
37	GO:0070072: vacuolar proton-transporting V-type ATPase complex assembly	5.82E-04
38	GO:0009584: detection of visible light	5.82E-04
39	GO:0044211: CTP salvage	5.82E-04
40	GO:0006020: inositol metabolic process	5.82E-04
41	GO:0009765: photosynthesis, light harvesting	7.73E-04
42	GO:2000306: positive regulation of photomorphogenesis	7.73E-04
43	GO:0010600: regulation of auxin biosynthetic process	7.73E-04
44	GO:0044206: UMP salvage	7.73E-04
45	GO:0030104: water homeostasis	7.73E-04
46	GO:0045927: positive regulation of growth	9.77E-04
47	GO:0043097: pyrimidine nucleoside salvage	9.77E-04
48	GO:0009904: chloroplast accumulation movement	9.77E-04
49	GO:0007623: circadian rhythm	1.13E-03
50	GO:0045962: positive regulation of development, heterochronic	1.19E-03
51	GO:0006206: pyrimidine nucleobase metabolic process	1.19E-03
52	GO:0007035: vacuolar acidification	1.19E-03
53	GO:0002238: response to molecule of fungal origin	1.19E-03
54	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.43E-03
55	GO:0017148: negative regulation of translation	1.43E-03
56	GO:0009903: chloroplast avoidance movement	1.43E-03
57	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.43E-03
58	GO:0000160: phosphorelay signal transduction system	1.58E-03
59	GO:0009769: photosynthesis, light harvesting in photosystem II	1.67E-03
60	GO:0009416: response to light stimulus	1.75E-03
61	GO:0010928: regulation of auxin mediated signaling pathway	1.93E-03
62	GO:0009704: de-etiolation	1.93E-03
63	GO:0010099: regulation of photomorphogenesis	2.21E-03
64	GO:0009827: plant-type cell wall modification	2.21E-03
65	GO:0009640: photomorphogenesis	2.44E-03
66	GO:0010345: suberin biosynthetic process	2.49E-03
67	GO:0046685: response to arsenic-containing substance	2.49E-03
68	GO:0048507: meristem development	2.49E-03
69	GO:0090333: regulation of stomatal closure	2.49E-03
70	GO:0080167: response to karrikin	2.55E-03
71	GO:0008643: carbohydrate transport	2.63E-03
72	GO:0030042: actin filament depolymerization	2.79E-03
73	GO:0048354: mucilage biosynthetic process involved in seed coat development	2.79E-03
74	GO:0008356: asymmetric cell division	2.79E-03
75	GO:0015979: photosynthesis	3.01E-03
76	GO:0006535: cysteine biosynthetic process from serine	3.10E-03
77	GO:0009641: shade avoidance	3.10E-03
78	GO:0009585: red, far-red light phototransduction	3.27E-03
79	GO:0006351: transcription, DNA-templated	3.67E-03
80	GO:0009785: blue light signaling pathway	4.09E-03
81	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	4.09E-03
82	GO:0009718: anthocyanin-containing compound biosynthetic process	4.09E-03
83	GO:0010143: cutin biosynthetic process	4.44E-03
84	GO:0007015: actin filament organization	4.44E-03
85	GO:0009266: response to temperature stimulus	4.44E-03
86	GO:0090351: seedling development	4.80E-03
87	GO:0034976: response to endoplasmic reticulum stress	5.18E-03
88	GO:0010025: wax biosynthetic process	5.18E-03
89	GO:0019344: cysteine biosynthetic process	5.56E-03
90	GO:0008299: isoprenoid biosynthetic process	5.95E-03
91	GO:0009058: biosynthetic process	6.11E-03
92	GO:0061077: chaperone-mediated protein folding	6.35E-03
93	GO:0009269: response to desiccation	6.35E-03
94	GO:0051321: meiotic cell cycle	6.35E-03
95	GO:0003333: amino acid transmembrane transport	6.35E-03
96	GO:0048511: rhythmic process	6.35E-03
97	GO:0006355: regulation of transcription, DNA-templated	6.41E-03
98	GO:0030433: ubiquitin-dependent ERAD pathway	6.76E-03
99	GO:0071215: cellular response to abscisic acid stimulus	7.18E-03
100	GO:0010227: floral organ abscission	7.18E-03
101	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	8.05E-03
102	GO:0009409: response to cold	8.07E-03
103	GO:0015991: ATP hydrolysis coupled proton transport	8.49E-03
104	GO:0042335: cuticle development	8.49E-03
105	GO:0010118: stomatal movement	8.49E-03
106	GO:0015986: ATP synthesis coupled proton transport	9.42E-03
107	GO:0006814: sodium ion transport	9.42E-03
108	GO:0006623: protein targeting to vacuole	9.90E-03
109	GO:0009630: gravitropism	1.09E-02
110	GO:1901657: glycosyl compound metabolic process	1.14E-02
111	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.40E-02
112	GO:0010029: regulation of seed germination	1.40E-02
113	GO:0009723: response to ethylene	1.44E-02
114	GO:0015995: chlorophyll biosynthetic process	1.51E-02
115	GO:0048573: photoperiodism, flowering	1.51E-02
116	GO:0006950: response to stress	1.51E-02
117	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.59E-02
118	GO:0048481: plant ovule development	1.62E-02
119	GO:0044550: secondary metabolite biosynthetic process	1.68E-02
120	GO:0010119: regulation of stomatal movement	1.80E-02
121	GO:0009408: response to heat	2.28E-02
122	GO:0000209: protein polyubiquitination	2.37E-02
123	GO:0009965: leaf morphogenesis	2.50E-02
124	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.64E-02
125	GO:0009909: regulation of flower development	3.06E-02
126	GO:0009651: response to salt stress	3.13E-02
127	GO:0005975: carbohydrate metabolic process	3.56E-02
128	GO:0009624: response to nematode	3.66E-02
129	GO:0009738: abscisic acid-activated signaling pathway	3.90E-02
130	GO:0006468: protein phosphorylation	4.01E-02
131	GO:0035556: intracellular signal transduction	4.25E-02

Rank	GO Term	Adjusted P value
1	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
2	GO:0042907: xanthine transmembrane transporter activity	0.00E+00
3	GO:0004567: beta-mannosidase activity	0.00E+00
4	GO:0080082: esculin beta-glucosidase activity	0.00E+00
5	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
6	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
7	GO:0050511: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity	0.00E+00
8	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
9	GO:0031409: pigment binding	1.13E-07
10	GO:0016168: chlorophyll binding	3.11E-06
11	GO:0000829: inositol heptakisphosphate kinase activity	1.04E-04
12	GO:0080079: cellobiose glucosidase activity	1.04E-04
13	GO:1990189: peptide-serine-N-acetyltransferase activity	1.04E-04
14	GO:0000828: inositol hexakisphosphate kinase activity	1.04E-04
15	GO:1990190: peptide-glutamate-N-acetyltransferase activity	1.04E-04
16	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	1.04E-04
17	GO:0008158: hedgehog receptor activity	1.04E-04
18	GO:0030275: LRR domain binding	1.04E-04
19	GO:0031516: far-red light photoreceptor activity	1.04E-04
20	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	1.04E-04
21	GO:0000155: phosphorelay sensor kinase activity	2.14E-04
22	GO:0015180: L-alanine transmembrane transporter activity	2.44E-04
23	GO:0050017: L-3-cyanoalanine synthase activity	2.44E-04
24	GO:0005274: allantoin uptake transmembrane transporter activity	2.44E-04
25	GO:0009883: red or far-red light photoreceptor activity	2.44E-04
26	GO:0008020: G-protein coupled photoreceptor activity	4.05E-04
27	GO:0015189: L-lysine transmembrane transporter activity	5.82E-04
28	GO:0015181: arginine transmembrane transporter activity	5.82E-04
29	GO:0009882: blue light photoreceptor activity	5.82E-04
30	GO:0015210: uracil transmembrane transporter activity	7.73E-04
31	GO:0005313: L-glutamate transmembrane transporter activity	7.73E-04
32	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	7.73E-04
33	GO:0004845: uracil phosphoribosyltransferase activity	7.73E-04
34	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	7.83E-04
35	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	9.77E-04
36	GO:0002020: protease binding	9.77E-04
37	GO:0051117: ATPase binding	1.19E-03
38	GO:0004124: cysteine synthase activity	1.43E-03
39	GO:0004849: uridine kinase activity	1.43E-03
40	GO:0004672: protein kinase activity	2.31E-03
41	GO:0000989: transcription factor activity, transcription factor binding	2.49E-03
42	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.49E-03
43	GO:0004497: monooxygenase activity	2.55E-03
44	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	3.10E-03
45	GO:0004673: protein histidine kinase activity	3.10E-03
46	GO:0047372: acylglycerol lipase activity	3.42E-03
47	GO:0046961: proton-transporting ATPase activity, rotational mechanism	3.42E-03
48	GO:0004565: beta-galactosidase activity	4.09E-03
49	GO:0005315: inorganic phosphate transmembrane transporter activity	4.09E-03
50	GO:0031624: ubiquitin conjugating enzyme binding	4.44E-03
51	GO:0003712: transcription cofactor activity	4.80E-03
52	GO:0004674: protein serine/threonine kinase activity	6.12E-03
53	GO:0019706: protein-cysteine S-palmitoyltransferase activity	6.35E-03
54	GO:0008514: organic anion transmembrane transporter activity	7.61E-03
55	GO:0003756: protein disulfide isomerase activity	7.61E-03
56	GO:0015297: antiporter activity	7.63E-03
57	GO:0008080: N-acetyltransferase activity	8.95E-03
58	GO:0030276: clathrin binding	8.95E-03
59	GO:0010181: FMN binding	9.42E-03
60	GO:0042802: identical protein binding	1.02E-02
61	GO:0000156: phosphorelay response regulator activity	1.14E-02
62	GO:0046872: metal ion binding	1.24E-02
63	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.24E-02
64	GO:0019825: oxygen binding	1.35E-02
65	GO:0102483: scopolin beta-glucosidase activity	1.51E-02
66	GO:0005515: protein binding	1.58E-02
67	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.65E-02
68	GO:0005096: GTPase activator activity	1.68E-02
69	GO:0042803: protein homodimerization activity	1.93E-02
70	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.99E-02
71	GO:0008422: beta-glucosidase activity	2.04E-02
72	GO:0005506: iron ion binding	2.07E-02
73	GO:0015293: symporter activity	2.50E-02
74	GO:0003677: DNA binding	2.51E-02
75	GO:0016301: kinase activity	2.61E-02
76	GO:0008270: zinc ion binding	2.65E-02
77	GO:0015171: amino acid transmembrane transporter activity	3.06E-02
78	GO:0031625: ubiquitin protein ligase binding	3.06E-02
79	GO:0003729: mRNA binding	3.47E-02
80	GO:0022857: transmembrane transporter activity	3.50E-02
81	GO:0016874: ligase activity	3.50E-02
82	GO:0003779: actin binding	3.58E-02
83	GO:0016746: transferase activity, transferring acyl groups	3.73E-02
84	GO:0020037: heme binding	3.73E-02
85	GO:0030170: pyridoxal phosphate binding	4.62E-02
86	GO:0015144: carbohydrate transmembrane transporter activity	4.87E-02
87	GO:0016740: transferase activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0009522: photosystem I	8.71E-07
2	GO:0010287: plastoglobule	3.88E-06
3	GO:0030076: light-harvesting complex	7.30E-06
4	GO:0009523: photosystem II	4.23E-05
5	GO:0009579: thylakoid	7.46E-05
6	GO:0012510: trans-Golgi network transport vesicle membrane	1.04E-04
7	GO:0031415: NatA complex	2.44E-04
8	GO:0009534: chloroplast thylakoid	4.76E-04
9	GO:0009898: cytoplasmic side of plasma membrane	7.73E-04
10	GO:0009517: PSII associated light-harvesting complex II	7.73E-04
11	GO:0016471: vacuolar proton-transporting V-type ATPase complex	7.73E-04
12	GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain	9.77E-04
13	GO:0016021: integral component of membrane	1.47E-03
14	GO:0000151: ubiquitin ligase complex	1.51E-03
15	GO:0009986: cell surface	1.67E-03
16	GO:0016604: nuclear body	2.79E-03
17	GO:0005884: actin filament	3.42E-03
18	GO:0016607: nuclear speck	3.98E-03
19	GO:0030176: integral component of endoplasmic reticulum membrane	4.80E-03
20	GO:0009535: chloroplast thylakoid membrane	4.83E-03
21	GO:0015629: actin cytoskeleton	7.18E-03
22	GO:0030136: clathrin-coated vesicle	8.05E-03
23	GO:0005770: late endosome	8.95E-03
24	GO:0016020: membrane	1.55E-02
25	GO:0009941: chloroplast envelope	1.74E-02
26	GO:0000325: plant-type vacuole	1.80E-02
27	GO:0009507: chloroplast	2.01E-02
28	GO:0031966: mitochondrial membrane	2.70E-02
29	GO:0009505: plant-type cell wall	2.80E-02
30	GO:0022626: cytosolic ribosome	3.86E-02
31	GO:0005737: cytoplasm	4.29E-02
32	GO:0005623: cell	4.37E-02