co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G05180

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
2	GO:0019918: peptidyl-arginine methylation, to symmetrical-dimethyl arginine	0.00E+00
3	GO:0045900: negative regulation of translational elongation	0.00E+00
4	GO:0006099: tricarboxylic acid cycle	7.98E-09
5	GO:0006102: isocitrate metabolic process	1.36E-05
6	GO:0006422: aspartyl-tRNA aminoacylation	4.04E-05
7	GO:0010220: positive regulation of vernalization response	1.00E-04
8	GO:0031204: posttranslational protein targeting to membrane, translocation	1.00E-04
9	GO:0061077: chaperone-mediated protein folding	1.13E-04
10	GO:0033320: UDP-D-xylose biosynthetic process	3.43E-04
11	GO:1903830: magnesium ion transmembrane transport	3.43E-04
12	GO:0018279: protein N-linked glycosylation via asparagine	4.37E-04
13	GO:0042732: D-xylose metabolic process	5.37E-04
14	GO:0045040: protein import into mitochondrial outer membrane	5.37E-04
15	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	5.37E-04
16	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	5.37E-04
17	GO:0042026: protein refolding	6.40E-04
18	GO:0009423: chorismate biosynthetic process	6.40E-04
19	GO:0006458: 'de novo' protein folding	6.40E-04
20	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	7.49E-04
21	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	7.49E-04
22	GO:0042773: ATP synthesis coupled electron transport	7.49E-04
23	GO:0015693: magnesium ion transport	7.49E-04
24	GO:0048658: anther wall tapetum development	8.61E-04
25	GO:0080144: amino acid homeostasis	1.10E-03
26	GO:0009060: aerobic respiration	1.10E-03
27	GO:0006096: glycolytic process	1.14E-03
28	GO:0046686: response to cadmium ion	1.47E-03
29	GO:0009073: aromatic amino acid family biosynthetic process	1.49E-03
30	GO:0016485: protein processing	1.49E-03
31	GO:0006626: protein targeting to mitochondrion	1.77E-03
32	GO:0006006: glucose metabolic process	1.77E-03
33	GO:0006446: regulation of translational initiation	1.92E-03
34	GO:0009225: nucleotide-sugar metabolic process	2.07E-03
35	GO:0034976: response to endoplasmic reticulum stress	2.23E-03
36	GO:0030433: ubiquitin-dependent ERAD pathway	2.89E-03
37	GO:0007005: mitochondrion organization	2.89E-03
38	GO:0042631: cellular response to water deprivation	3.61E-03
39	GO:0080022: primary root development	3.61E-03
40	GO:0071472: cellular response to salt stress	3.80E-03
41	GO:0080156: mitochondrial mRNA modification	4.38E-03
42	GO:0045454: cell redox homeostasis	5.28E-03
43	GO:0055114: oxidation-reduction process	6.11E-03
44	GO:0009853: photorespiration	7.99E-03
45	GO:0030001: metal ion transport	8.75E-03
46	GO:0009735: response to cytokinin	1.06E-02
47	GO:0009664: plant-type cell wall organization	1.12E-02
48	GO:0009909: regulation of flower development	1.26E-02
49	GO:0006457: protein folding	1.50E-02
50	GO:0006511: ubiquitin-dependent protein catabolic process	1.57E-02
51	GO:0009651: response to salt stress	2.00E-02
52	GO:0006413: translational initiation	2.12E-02
53	GO:0006979: response to oxidative stress	2.37E-02
54	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.41E-02
55	GO:0009826: unidimensional cell growth	2.95E-02
56	GO:0006970: response to osmotic stress	3.20E-02
57	GO:0015979: photosynthesis	3.89E-02
58	GO:0032259: methylation	4.53E-02

Rank	GO Term	Adjusted P value
1	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
2	GO:0003856: 3-dehydroquinate synthase activity	0.00E+00
3	GO:0004775: succinate-CoA ligase (ADP-forming) activity	1.05E-07
4	GO:0004776: succinate-CoA ligase (GDP-forming) activity	1.05E-07
5	GO:0008312: 7S RNA binding	1.36E-05
6	GO:0004815: aspartate-tRNA ligase activity	4.04E-05
7	GO:0008802: betaine-aldehyde dehydrogenase activity	4.04E-05
8	GO:0048037: cofactor binding	4.04E-05
9	GO:0005507: copper ion binding	5.21E-05
10	GO:0004450: isocitrate dehydrogenase (NADP+) activity	1.00E-04
11	GO:0005047: signal recognition particle binding	1.73E-04
12	GO:0008469: histone-arginine N-methyltransferase activity	1.73E-04
13	GO:0004324: ferredoxin-NADP+ reductase activity	1.73E-04
14	GO:0016491: oxidoreductase activity	1.94E-04
15	GO:0004449: isocitrate dehydrogenase (NAD+) activity	2.55E-04
16	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	2.55E-04
17	GO:0008276: protein methyltransferase activity	2.55E-04
18	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	3.43E-04
19	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	4.37E-04
20	GO:0004222: metalloendopeptidase activity	5.04E-04
21	GO:0004029: aldehyde dehydrogenase (NAD) activity	5.37E-04
22	GO:0036402: proteasome-activating ATPase activity	5.37E-04
23	GO:0048040: UDP-glucuronate decarboxylase activity	5.37E-04
24	GO:0051920: peroxiredoxin activity	6.40E-04
25	GO:0070403: NAD+ binding	6.40E-04
26	GO:0016209: antioxidant activity	8.61E-04
27	GO:0051287: NAD binding	8.82E-04
28	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	1.22E-03
29	GO:0004129: cytochrome-c oxidase activity	1.49E-03
30	GO:0044183: protein binding involved in protein folding	1.49E-03
31	GO:0015095: magnesium ion transmembrane transporter activity	1.77E-03
32	GO:0017025: TBP-class protein binding	2.07E-03
33	GO:0005528: FK506 binding	2.39E-03
34	GO:0051536: iron-sulfur cluster binding	2.39E-03
35	GO:0003954: NADH dehydrogenase activity	2.39E-03
36	GO:0003756: protein disulfide isomerase activity	3.24E-03
37	GO:0001085: RNA polymerase II transcription factor binding	3.80E-03
38	GO:0046873: metal ion transmembrane transporter activity	3.80E-03
39	GO:0008137: NADH dehydrogenase (ubiquinone) activity	4.38E-03
40	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	6.77E-03
41	GO:0003729: mRNA binding	7.12E-03
42	GO:0050897: cobalt ion binding	7.49E-03
43	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	7.49E-03
44	GO:0003746: translation elongation factor activity	7.99E-03
45	GO:0003697: single-stranded DNA binding	7.99E-03
46	GO:0051539: 4 iron, 4 sulfur cluster binding	8.75E-03
47	GO:0050661: NADP binding	8.75E-03
48	GO:0046872: metal ion binding	8.93E-03
49	GO:0043621: protein self-association	1.01E-02
50	GO:0051537: 2 iron, 2 sulfur cluster binding	1.01E-02
51	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.06E-02
52	GO:0000166: nucleotide binding	1.16E-02
53	GO:0051082: unfolded protein binding	1.51E-02
54	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	1.94E-02
55	GO:0008565: protein transporter activity	2.01E-02
56	GO:0005524: ATP binding	2.11E-02
57	GO:0003743: translation initiation factor activity	2.48E-02
58	GO:0003824: catalytic activity	2.58E-02
59	GO:0008168: methyltransferase activity	2.95E-02
60	GO:0000287: magnesium ion binding	2.99E-02
61	GO:0004601: peroxidase activity	3.04E-02
62	GO:0003682: chromatin binding	3.16E-02
63	GO:0009055: electron carrier activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0031595: nuclear proteasome complex	1.02E-05
2	GO:0005759: mitochondrial matrix	1.04E-05
3	GO:0005829: cytosol	3.10E-05
4	GO:0032783: ELL-EAF complex	4.04E-05
5	GO:0005750: mitochondrial respiratory chain complex III	6.26E-05
6	GO:0005739: mitochondrion	8.49E-05
7	GO:0005741: mitochondrial outer membrane	1.13E-04
8	GO:0005788: endoplasmic reticulum lumen	3.73E-04
9	GO:0008250: oligosaccharyltransferase complex	4.37E-04
10	GO:0005746: mitochondrial respiratory chain	4.37E-04
11	GO:0031597: cytosolic proteasome complex	6.40E-04
12	GO:0045273: respiratory chain complex II	8.61E-04
13	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	8.61E-04
14	GO:0000502: proteasome complex	9.76E-04
15	GO:0005742: mitochondrial outer membrane translocase complex	9.77E-04
16	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	9.77E-04
17	GO:0005783: endoplasmic reticulum	9.78E-04
18	GO:0008540: proteasome regulatory particle, base subcomplex	1.22E-03
19	GO:0008541: proteasome regulatory particle, lid subcomplex	1.49E-03
20	GO:0005794: Golgi apparatus	1.91E-03
21	GO:0030176: integral component of endoplasmic reticulum membrane	2.07E-03
22	GO:0005758: mitochondrial intermembrane space	2.39E-03
23	GO:0045271: respiratory chain complex I	2.55E-03
24	GO:0005744: mitochondrial inner membrane presequence translocase complex	3.24E-03
25	GO:0005774: vacuolar membrane	4.93E-03
26	GO:0032580: Golgi cisterna membrane	5.00E-03
27	GO:0005743: mitochondrial inner membrane	6.05E-03
28	GO:0005618: cell wall	6.05E-03
29	GO:0005667: transcription factor complex	6.09E-03
30	GO:0009507: chloroplast	7.42E-03
31	GO:0016020: membrane	7.51E-03
32	GO:0005773: vacuole	9.42E-03
33	GO:0031966: mitochondrial membrane	1.12E-02
34	GO:0005777: peroxisome	1.33E-02
35	GO:0005747: mitochondrial respiratory chain complex I	1.35E-02
36	GO:0009543: chloroplast thylakoid lumen	1.77E-02
37	GO:0005802: trans-Golgi network	1.86E-02
38	GO:0005768: endosome	2.11E-02
39	GO:0046658: anchored component of plasma membrane	2.72E-02
40	GO:0009536: plastid	2.88E-02
41	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.24E-02
42	GO:0005789: endoplasmic reticulum membrane	3.58E-02
43	GO:0005730: nucleolus	3.96E-02
44	GO:0009570: chloroplast stroma	4.59E-02