co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G04960

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080020: regulation of coenzyme A biosynthetic process	0.00E+00
2	GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process	6.71E-06
3	GO:0046740: transport of virus in host, cell to cell	1.83E-05
4	GO:1904961: quiescent center organization	1.83E-05
5	GO:0010071: root meristem specification	5.17E-05
6	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	1.20E-04
7	GO:0015937: coenzyme A biosynthetic process	1.74E-04
8	GO:0010078: maintenance of root meristem identity	2.03E-04
9	GO:0010492: maintenance of shoot apical meristem identity	2.03E-04
10	GO:0010449: root meristem growth	2.95E-04
11	GO:0006470: protein dephosphorylation	3.14E-04
12	GO:0009266: response to temperature stimulus	4.66E-04
13	GO:0006886: intracellular protein transport	6.38E-04
14	GO:0019915: lipid storage	6.53E-04
15	GO:0016226: iron-sulfur cluster assembly	6.92E-04
16	GO:0006730: one-carbon metabolic process	6.92E-04
17	GO:0040007: growth	7.31E-04
18	GO:0042147: retrograde transport, endosome to Golgi	8.13E-04
19	GO:0080022: primary root development	8.55E-04
20	GO:0006904: vesicle docking involved in exocytosis	1.20E-03
21	GO:0048767: root hair elongation	1.60E-03
22	GO:0006887: exocytosis	2.03E-03
23	GO:0031347: regulation of defense response	2.43E-03
24	GO:0009058: biosynthetic process	4.01E-03
25	GO:0010468: regulation of gene expression	5.44E-03
26	GO:0009793: embryo development ending in seed dormancy	5.92E-03
27	GO:0006970: response to osmotic stress	6.85E-03
28	GO:0046777: protein autophosphorylation	7.91E-03
29	GO:0009651: response to salt stress	8.59E-03
30	GO:0006629: lipid metabolic process	9.92E-03
31	GO:0006397: mRNA processing	1.02E-02
32	GO:0048364: root development	1.02E-02
33	GO:0006511: ubiquitin-dependent protein catabolic process	1.85E-02
34	GO:0042742: defense response to bacterium	2.46E-02
35	GO:0015031: protein transport	2.92E-02
36	GO:0009737: response to abscisic acid	4.22E-02

Rank	GO Term	Adjusted P value
1	GO:0004595: pantetheine-phosphate adenylyltransferase activity	0.00E+00
2	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	1.83E-05
3	GO:0004416: hydroxyacylglutathione hydrolase activity	5.17E-05
4	GO:0005543: phospholipid binding	3.61E-04
5	GO:0051087: chaperone binding	6.14E-04
6	GO:0004722: protein serine/threonine phosphatase activity	6.76E-04
7	GO:0016779: nucleotidyltransferase activity	6.92E-04
8	GO:0005096: GTPase activator activity	1.60E-03
9	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.92E-03
10	GO:0008565: protein transporter activity	4.37E-03
11	GO:0046872: metal ion binding	5.48E-03
12	GO:0046982: protein heterodimerization activity	6.42E-03
13	GO:0042803: protein homodimerization activity	8.84E-03
14	GO:0003924: GTPase activity	9.92E-03
15	GO:0000166: nucleotide binding	1.49E-02
16	GO:0005525: GTP binding	2.12E-02
17	GO:0005509: calcium ion binding	2.32E-02
18	GO:0004842: ubiquitin-protein transferase activity	3.10E-02
19	GO:0004672: protein kinase activity	3.23E-02

Rank	GO Term	Adjusted P value
1	GO:0097361: CIA complex	0.00E+00
2	GO:0045335: phagocytic vesicle	0.00E+00
3	GO:0070062: extracellular exosome	5.17E-05
4	GO:0031902: late endosome membrane	6.90E-05
5	GO:0030904: retromer complex	1.20E-04
6	GO:0000145: exocyst	1.07E-03
7	GO:0000502: proteasome complex	2.62E-03
8	GO:0005829: cytosol	2.69E-03
9	GO:0005834: heterotrimeric G-protein complex	3.06E-03
10	GO:0005623: cell	3.93E-03
11	GO:0005794: Golgi apparatus	9.68E-03
12	GO:0005773: vacuole	1.36E-02
13	GO:0005622: intracellular	2.24E-02
14	GO:0005768: endosome	2.28E-02
15	GO:0009536: plastid	2.84E-02