Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G04820

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010394: homogalacturonan metabolic process0.00E+00
2GO:0046396: D-galacturonate metabolic process0.00E+00
3GO:0070125: mitochondrial translational elongation0.00E+00
4GO:0006223: uracil salvage0.00E+00
5GO:0006426: glycyl-tRNA aminoacylation1.67E-05
6GO:0045488: pectin metabolic process1.67E-05
7GO:0006430: lysyl-tRNA aminoacylation1.67E-05
8GO:0006418: tRNA aminoacylation for protein translation2.85E-05
9GO:0006633: fatty acid biosynthetic process3.92E-05
10GO:0006695: cholesterol biosynthetic process4.35E-05
11GO:0051085: chaperone mediated protein folding requiring cofactor1.17E-04
12GO:0006241: CTP biosynthetic process1.17E-04
13GO:0006165: nucleoside diphosphate phosphorylation1.17E-04
14GO:0006228: UTP biosynthetic process1.17E-04
15GO:0009627: systemic acquired resistance1.25E-04
16GO:0006183: GTP biosynthetic process1.61E-04
17GO:0044206: UMP salvage1.61E-04
18GO:0043097: pyrimidine nucleoside salvage2.09E-04
19GO:0006631: fatty acid metabolic process2.29E-04
20GO:0006796: phosphate-containing compound metabolic process2.59E-04
21GO:0006206: pyrimidine nucleobase metabolic process2.59E-04
22GO:0046835: carbohydrate phosphorylation3.11E-04
23GO:0042026: protein refolding3.11E-04
24GO:0045995: regulation of embryonic development3.66E-04
25GO:0006955: immune response3.66E-04
26GO:0033384: geranyl diphosphate biosynthetic process5.42E-04
27GO:0045337: farnesyl diphosphate biosynthetic process5.42E-04
28GO:0009116: nucleoside metabolic process1.16E-03
29GO:0008299: isoprenoid biosynthetic process1.23E-03
30GO:0007017: microtubule-based process1.23E-03
31GO:0016998: cell wall macromolecule catabolic process1.31E-03
32GO:0007005: mitochondrion organization1.39E-03
33GO:0009411: response to UV1.47E-03
34GO:0040007: growth1.47E-03
35GO:0006012: galactose metabolic process1.47E-03
36GO:0045489: pectin biosynthetic process1.82E-03
37GO:0007018: microtubule-based movement1.91E-03
38GO:0032502: developmental process2.18E-03
39GO:0071805: potassium ion transmembrane transport2.48E-03
40GO:0008219: cell death3.20E-03
41GO:0048481: plant ovule development3.20E-03
42GO:0042542: response to hydrogen peroxide4.35E-03
43GO:0009585: red, far-red light phototransduction5.48E-03
44GO:0006813: potassium ion transport5.48E-03
45GO:0006412: translation8.45E-03
46GO:0016036: cellular response to phosphate starvation9.74E-03
47GO:0046686: response to cadmium ion1.21E-02
48GO:0009793: embryo development ending in seed dormancy1.80E-02
49GO:0016042: lipid catabolic process2.10E-02
50GO:0008152: metabolic process2.29E-02
51GO:0009651: response to salt stress2.61E-02
52GO:0009734: auxin-activated signaling pathway2.73E-02
53GO:0006457: protein folding3.87E-02
54GO:0006414: translational elongation4.28E-02
RankGO TermAdjusted P value
1GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity0.00E+00
2GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
3GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
4GO:0047912: galacturonokinase activity0.00E+00
5GO:0004820: glycine-tRNA ligase activity1.67E-05
6GO:0004824: lysine-tRNA ligase activity1.67E-05
7GO:0042834: peptidoglycan binding1.67E-05
8GO:0004812: aminoacyl-tRNA ligase activity4.82E-05
9GO:0070330: aromatase activity7.77E-05
10GO:0004550: nucleoside diphosphate kinase activity1.17E-04
11GO:0004335: galactokinase activity1.61E-04
12GO:0004845: uracil phosphoribosyltransferase activity1.61E-04
13GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed1.61E-04
14GO:0004045: aminoacyl-tRNA hydrolase activity1.61E-04
15GO:0018685: alkane 1-monooxygenase activity2.09E-04
16GO:0016462: pyrophosphatase activity2.59E-04
17GO:0004849: uridine kinase activity3.11E-04
18GO:0102391: decanoate--CoA ligase activity3.11E-04
19GO:0004467: long-chain fatty acid-CoA ligase activity3.66E-04
20GO:0016831: carboxy-lyase activity3.66E-04
21GO:0004427: inorganic diphosphatase activity3.66E-04
22GO:0004337: geranyltranstransferase activity5.42E-04
23GO:0019843: rRNA binding5.92E-04
24GO:0044183: protein binding involved in protein folding7.34E-04
25GO:0004161: dimethylallyltranstransferase activity7.34E-04
26GO:0015079: potassium ion transmembrane transporter activity1.23E-03
27GO:0005524: ATP binding1.28E-03
28GO:0019706: protein-cysteine S-palmitoyltransferase activity1.31E-03
29GO:0001085: RNA polymerase II transcription factor binding1.82E-03
30GO:0005200: structural constituent of cytoskeleton2.48E-03
31GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding3.53E-03
32GO:0003746: translation elongation factor activity3.76E-03
33GO:0003777: microtubule motor activity5.88E-03
34GO:0051082: unfolded protein binding6.99E-03
35GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding8.94E-03
36GO:0008017: microtubule binding1.06E-02
37GO:0000287: magnesium ion binding1.37E-02
38GO:0016788: hydrolase activity, acting on ester bonds1.41E-02
39GO:0003682: chromatin binding1.45E-02
40GO:0003735: structural constituent of ribosome1.54E-02
41GO:0052689: carboxylic ester hydrolase activity1.74E-02
42GO:0016887: ATPase activity2.92E-02
43GO:0046872: metal ion binding3.11E-02
44GO:0016740: transferase activity3.71E-02
45GO:0005507: copper ion binding4.14E-02
46GO:0019825: oxygen binding4.14E-02
47GO:0005525: GTP binding4.59E-02
RankGO TermAdjusted P value
1GO:0005835: fatty acid synthase complex0.00E+00
2GO:0009570: chloroplast stroma1.66E-12
3GO:0009941: chloroplast envelope1.26E-07
4GO:0009507: chloroplast2.42E-07
5GO:0005762: mitochondrial large ribosomal subunit3.11E-04
6GO:0045298: tubulin complex5.42E-04
7GO:0009579: thylakoid5.52E-04
8GO:0000311: plastid large ribosomal subunit8.01E-04
9GO:0000312: plastid small ribosomal subunit9.39E-04
10GO:0030659: cytoplasmic vesicle membrane9.39E-04
11GO:0009536: plastid1.36E-03
12GO:0005871: kinesin complex1.64E-03
13GO:0010319: stromule2.48E-03
14GO:0009295: nucleoid2.48E-03
15GO:0005667: transcription factor complex2.88E-03
16GO:0000325: plant-type vacuole3.53E-03
17GO:0016020: membrane5.43E-03
18GO:0005759: mitochondrial matrix9.58E-03
19GO:0046658: anchored component of plasma membrane1.25E-02
20GO:0022627: cytosolic small ribosomal subunit1.25E-02
21GO:0005874: microtubule1.58E-02
22GO:0048046: apoplast2.83E-02
23GO:0022626: cytosolic ribosome3.12E-02
24GO:0031225: anchored component of membrane4.42E-02
25GO:0005802: trans-Golgi network4.51E-02
26GO:0005768: endosome4.94E-02
Gene type



Gene DE type