Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G04690

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0030644: cellular chloride ion homeostasis0.00E+00
2GO:0051928: positive regulation of calcium ion transport0.00E+00
3GO:0010286: heat acclimation5.41E-06
4GO:0035494: SNARE complex disassembly3.12E-05
5GO:1902884: positive regulation of response to oxidative stress7.88E-05
6GO:0035335: peptidyl-tyrosine dephosphorylation7.88E-05
7GO:0006883: cellular sodium ion homeostasis7.88E-05
8GO:0042344: indole glucosinolate catabolic process1.37E-04
9GO:1901562: response to paraquat1.37E-04
10GO:1902448: positive regulation of shade avoidance1.37E-04
11GO:0010468: regulation of gene expression1.86E-04
12GO:1901332: negative regulation of lateral root development2.04E-04
13GO:1901002: positive regulation of response to salt stress2.76E-04
14GO:0000741: karyogamy4.34E-04
15GO:0006333: chromatin assembly or disassembly6.07E-04
16GO:0009395: phospholipid catabolic process6.07E-04
17GO:0000165: MAPK cascade6.46E-04
18GO:0006491: N-glycan processing6.99E-04
19GO:0046916: cellular transition metal ion homeostasis8.92E-04
20GO:0055062: phosphate ion homeostasis1.10E-03
21GO:0007064: mitotic sister chromatid cohesion1.10E-03
22GO:0006535: cysteine biosynthetic process from serine1.10E-03
23GO:0009970: cellular response to sulfate starvation1.10E-03
24GO:0046856: phosphatidylinositol dephosphorylation1.20E-03
25GO:0009682: induced systemic resistance1.20E-03
26GO:0052544: defense response by callose deposition in cell wall1.20E-03
27GO:0050826: response to freezing1.43E-03
28GO:0090351: seedling development1.67E-03
29GO:0034976: response to endoplasmic reticulum stress1.79E-03
30GO:0019344: cysteine biosynthetic process1.92E-03
31GO:0010431: seed maturation2.19E-03
32GO:0009269: response to desiccation2.19E-03
33GO:0010197: polar nucleus fusion3.05E-03
34GO:0061025: membrane fusion3.20E-03
35GO:0044550: secondary metabolite biosynthetic process3.47E-03
36GO:0019760: glucosinolate metabolic process4.00E-03
37GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.69E-03
38GO:0009408: response to heat4.70E-03
39GO:0048573: photoperiodism, flowering5.05E-03
40GO:0006950: response to stress5.05E-03
41GO:0048481: plant ovule development5.42E-03
42GO:0009817: defense response to fungus, incompatible interaction5.42E-03
43GO:0010043: response to zinc ion5.99E-03
44GO:0030001: metal ion transport6.98E-03
45GO:0007165: signal transduction7.18E-03
46GO:0042542: response to hydrogen peroxide7.39E-03
47GO:0009640: photomorphogenesis7.60E-03
48GO:0009644: response to high light intensity8.03E-03
49GO:0008643: carbohydrate transport8.03E-03
50GO:0009416: response to light stimulus8.33E-03
51GO:0035556: intracellular signal transduction8.79E-03
52GO:0042538: hyperosmotic salinity response8.91E-03
53GO:0051603: proteolysis involved in cellular protein catabolic process9.59E-03
54GO:0009620: response to fungus1.13E-02
55GO:0006396: RNA processing1.22E-02
56GO:0007623: circadian rhythm1.77E-02
57GO:0010228: vegetative to reproductive phase transition of meristem1.82E-02
58GO:0009617: response to bacterium2.00E-02
59GO:0009409: response to cold2.29E-02
60GO:0006970: response to osmotic stress2.54E-02
61GO:0080167: response to karrikin2.81E-02
62GO:0045454: cell redox homeostasis3.19E-02
63GO:0006886: intracellular protein transport3.27E-02
64GO:0006629: lipid metabolic process3.71E-02
65GO:0008152: metabolic process3.97E-02
RankGO TermAdjusted P value
1GO:0046870: cadmium ion binding3.12E-05
2GO:0032791: lead ion binding7.88E-05
3GO:0016314: phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity7.88E-05
4GO:0004707: MAP kinase activity7.90E-05
5GO:0005483: soluble NSF attachment protein activity1.37E-04
6GO:0030527: structural constituent of chromatin2.04E-04
7GO:0009001: serine O-acetyltransferase activity2.04E-04
8GO:0052866: phosphatidylinositol phosphate phosphatase activity2.04E-04
9GO:0019905: syntaxin binding2.76E-04
10GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen3.53E-04
11GO:0019137: thioglucosidase activity4.34E-04
12GO:0070300: phosphatidic acid binding5.20E-04
13GO:0004525: ribonuclease III activity6.99E-04
14GO:0008138: protein tyrosine/serine/threonine phosphatase activity8.92E-04
15GO:0008081: phosphoric diester hydrolase activity1.43E-03
16GO:0003712: transcription cofactor activity1.67E-03
17GO:0004725: protein tyrosine phosphatase activity1.79E-03
18GO:0003756: protein disulfide isomerase activity2.61E-03
19GO:0003682: chromatin binding2.74E-03
20GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen4.12E-03
21GO:0102483: scopolin beta-glucosidase activity5.05E-03
22GO:0050897: cobalt ion binding5.99E-03
23GO:0003993: acid phosphatase activity6.58E-03
24GO:0008422: beta-glucosidase activity6.77E-03
25GO:0035091: phosphatidylinositol binding8.03E-03
26GO:0031625: ubiquitin protein ligase binding1.01E-02
27GO:0045735: nutrient reservoir activity1.05E-02
28GO:0019825: oxygen binding1.19E-02
29GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.43E-02
30GO:0005506: iron ion binding1.66E-02
31GO:0005351: sugar:proton symporter activity1.74E-02
32GO:0005215: transporter activity1.87E-02
33GO:0008270: zinc ion binding1.98E-02
34GO:0004842: ubiquitin-protein transferase activity2.34E-02
35GO:0016788: hydrolase activity, acting on ester bonds2.44E-02
36GO:0020037: heme binding2.67E-02
37GO:0008233: peptidase activity2.77E-02
38GO:0004497: monooxygenase activity2.81E-02
39GO:0016301: kinase activity3.20E-02
40GO:0005515: protein binding4.43E-02
RankGO TermAdjusted P value
1GO:0009898: cytoplasmic side of plasma membrane2.76E-04
2GO:0032586: protein storage vacuole membrane2.76E-04
3GO:0000326: protein storage vacuole7.94E-04
4GO:0005773: vacuole1.31E-03
5GO:0031965: nuclear membrane3.36E-03
6GO:0000785: chromatin3.68E-03
7GO:0000151: ubiquitin ligase complex5.42E-03
8GO:0031201: SNARE complex7.19E-03
9GO:0009706: chloroplast inner membrane1.20E-02
10GO:0010287: plastoglobule1.35E-02
11GO:0016021: integral component of membrane1.54E-02
12GO:0009941: chloroplast envelope2.02E-02
13GO:0009506: plasmodesma2.25E-02
14GO:0031969: chloroplast membrane2.81E-02
15GO:0005829: cytosol3.17E-02
16GO:0005783: endoplasmic reticulum3.31E-02
Gene type



Gene DE type