co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G04020

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0051290: protein heterotetramerization	0.00E+00
2	GO:1901671: positive regulation of superoxide dismutase activity	0.00E+00
3	GO:0016048: detection of temperature stimulus	0.00E+00
4	GO:0031508: pericentric heterochromatin assembly	0.00E+00
5	GO:0080094: response to trehalose-6-phosphate	0.00E+00
6	GO:0006342: chromatin silencing	2.87E-07
7	GO:0042026: protein refolding	1.03E-06
8	GO:0006458: 'de novo' protein folding	1.03E-06
9	GO:0044030: regulation of DNA methylation	2.58E-06
10	GO:0006169: adenosine salvage	1.21E-05
11	GO:0055047: generative cell mitosis	1.21E-05
12	GO:0061077: chaperone-mediated protein folding	1.98E-05
13	GO:0007005: mitochondrion organization	2.22E-05
14	GO:0090309: positive regulation of methylation-dependent chromatin silencing	3.21E-05
15	GO:0010424: DNA methylation on cytosine within a CG sequence	3.21E-05
16	GO:0042276: error-prone translesion synthesis	5.78E-05
17	GO:0070828: heterochromatin organization	5.78E-05
18	GO:0006275: regulation of DNA replication	5.78E-05
19	GO:0032776: DNA methylation on cytosine	5.78E-05
20	GO:0006986: response to unfolded protein	8.79E-05
21	GO:0051085: chaperone mediated protein folding requiring cofactor	8.79E-05
22	GO:0046686: response to cadmium ion	1.31E-04
23	GO:0044209: AMP salvage	1.59E-04
24	GO:0051301: cell division	2.93E-04
25	GO:0006002: fructose 6-phosphate metabolic process	3.73E-04
26	GO:0009790: embryo development	4.69E-04
27	GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	4.69E-04
28	GO:0006325: chromatin organization	5.20E-04
29	GO:0045036: protein targeting to chloroplast	5.20E-04
30	GO:0051555: flavonol biosynthetic process	5.20E-04
31	GO:0010216: maintenance of DNA methylation	5.71E-04
32	GO:0010468: regulation of gene expression	6.54E-04
33	GO:0007059: chromosome segregation	1.47E-03
34	GO:0016032: viral process	1.68E-03
35	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.14E-03
36	GO:0006457: protein folding	3.35E-03
37	GO:0006260: DNA replication	3.90E-03
38	GO:0009909: regulation of flower development	4.50E-03
39	GO:0006096: glycolytic process	4.70E-03
40	GO:0048316: seed development	4.81E-03
41	GO:0016569: covalent chromatin modification	5.13E-03
42	GO:0051726: regulation of cell cycle	5.56E-03
43	GO:0009658: chloroplast organization	1.06E-02
44	GO:0006970: response to osmotic stress	1.11E-02
45	GO:0007049: cell cycle	1.14E-02
46	GO:0015979: photosynthesis	1.35E-02
47	GO:0045892: negative regulation of transcription, DNA-templated	1.41E-02
48	GO:0016567: protein ubiquitination	1.59E-02
49	GO:0009408: response to heat	1.62E-02
50	GO:0009908: flower development	2.27E-02
51	GO:0009735: response to cytokinin	2.29E-02
52	GO:0009555: pollen development	2.44E-02
53	GO:0006511: ubiquitin-dependent protein catabolic process	3.04E-02
54	GO:0042742: defense response to bacterium	4.04E-02

Rank	GO Term	Adjusted P value
1	GO:0046982: protein heterodimerization activity	1.78E-08
2	GO:0003677: DNA binding	3.74E-08
3	GO:0051082: unfolded protein binding	1.33E-07
4	GO:0044183: protein binding involved in protein folding	6.19E-06
5	GO:0004001: adenosine kinase activity	1.21E-05
6	GO:0030337: DNA polymerase processivity factor activity	1.21E-05
7	GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity	5.78E-05
8	GO:0010429: methyl-CpNpN binding	5.78E-05
9	GO:0010428: methyl-CpNpG binding	5.78E-05
10	GO:0010385: double-stranded methylated DNA binding	1.22E-04
11	GO:0003872: 6-phosphofructokinase activity	2.82E-04
12	GO:0008327: methyl-CpG binding	5.71E-04
13	GO:0003682: chromatin binding	8.83E-04
14	GO:0051087: chaperone binding	9.61E-04
15	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	1.40E-03
16	GO:0005515: protein binding	3.07E-03
17	GO:0042393: histone binding	3.15E-03
18	GO:0005507: copper ion binding	3.68E-03
19	GO:0080043: quercetin 3-O-glucosyltransferase activity	5.02E-03
20	GO:0080044: quercetin 7-O-glucosyltransferase activity	5.02E-03
21	GO:0005524: ATP binding	5.70E-03
22	GO:0004842: ubiquitin-protein transferase activity	7.20E-03
23	GO:0008017: microtubule binding	8.05E-03
24	GO:0008194: UDP-glycosyltransferase activity	8.43E-03
25	GO:0061630: ubiquitin protein ligase activity	1.28E-02
26	GO:0005516: calmodulin binding	3.27E-02

Rank	GO Term	Adjusted P value
1	GO:0005721: pericentric heterochromatin	0.00E+00
2	GO:0000940: condensed chromosome outer kinetochore	0.00E+00
3	GO:0000786: nucleosome	8.51E-11
4	GO:0000790: nuclear chromatin	2.16E-07
5	GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex	1.21E-05
6	GO:0009579: thylakoid	2.13E-05
7	GO:0001673: male germ cell nucleus	3.21E-05
8	GO:0000792: heterochromatin	3.21E-05
9	GO:0005634: nucleus	1.41E-04
10	GO:0005730: nucleolus	1.51E-04
11	GO:0009570: chloroplast stroma	2.10E-04
12	GO:0010369: chromocenter	2.39E-04
13	GO:0005720: nuclear heterochromatin	4.21E-04
14	GO:0005876: spindle microtubule	4.69E-04
15	GO:0048046: apoplast	5.20E-04
16	GO:0009941: chloroplast envelope	7.66E-04
17	GO:0009532: plastid stroma	1.02E-03
18	GO:0019005: SCF ubiquitin ligase complex	2.46E-03
19	GO:0022626: cytosolic ribosome	2.49E-03
20	GO:0005623: cell	6.35E-03
21	GO:0005759: mitochondrial matrix	7.30E-03
22	GO:0043231: intracellular membrane-bounded organelle	1.74E-02
23	GO:0009534: chloroplast thylakoid	2.79E-02
24	GO:0005622: intracellular	3.68E-02
25	GO:0009536: plastid	4.67E-02