co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G03870

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901485: positive regulation of transcription factor catabolic process	0.00E+00
2	GO:0090393: sepal giant cell development	0.00E+00
3	GO:0010583: response to cyclopentenone	1.53E-07
4	GO:0071555: cell wall organization	5.08E-05
5	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	7.74E-05
6	GO:0000271: polysaccharide biosynthetic process	8.72E-05
7	GO:0045489: pectin biosynthetic process	9.76E-05
8	GO:0071370: cellular response to gibberellin stimulus	1.73E-04
9	GO:0006723: cuticle hydrocarbon biosynthetic process	1.73E-04
10	GO:0033481: galacturonate biosynthetic process	1.73E-04
11	GO:0010411: xyloglucan metabolic process	2.81E-04
12	GO:0000038: very long-chain fatty acid metabolic process	3.31E-04
13	GO:0007154: cell communication	3.92E-04
14	GO:0071497: cellular response to freezing	3.92E-04
15	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	3.92E-04
16	GO:0030036: actin cytoskeleton organization	4.32E-04
17	GO:0042546: cell wall biogenesis	6.37E-04
18	GO:0043447: alkane biosynthetic process	6.40E-04
19	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	6.40E-04
20	GO:0032877: positive regulation of DNA endoreduplication	9.13E-04
21	GO:1902358: sulfate transmembrane transport	9.13E-04
22	GO:0051016: barbed-end actin filament capping	9.13E-04
23	GO:0019722: calcium-mediated signaling	1.04E-03
24	GO:0080167: response to karrikin	1.18E-03
25	GO:0042335: cuticle development	1.21E-03
26	GO:0009741: response to brassinosteroid	1.30E-03
27	GO:2000762: regulation of phenylpropanoid metabolic process	1.54E-03
28	GO:0071554: cell wall organization or biogenesis	1.60E-03
29	GO:0060918: auxin transport	1.89E-03
30	GO:1900425: negative regulation of defense response to bacterium	1.89E-03
31	GO:0009828: plant-type cell wall loosening	1.93E-03
32	GO:0007267: cell-cell signaling	2.05E-03
33	GO:0045926: negative regulation of growth	2.27E-03
34	GO:0009554: megasporogenesis	2.27E-03
35	GO:0010555: response to mannitol	2.27E-03
36	GO:2000067: regulation of root morphogenesis	2.27E-03
37	GO:0016126: sterol biosynthetic process	2.30E-03
38	GO:0006400: tRNA modification	2.67E-03
39	GO:0051510: regulation of unidimensional cell growth	2.67E-03
40	GO:0050829: defense response to Gram-negative bacterium	2.67E-03
41	GO:0006402: mRNA catabolic process	3.09E-03
42	GO:0045010: actin nucleation	3.09E-03
43	GO:0052543: callose deposition in cell wall	3.09E-03
44	GO:0008610: lipid biosynthetic process	3.09E-03
45	GO:0022900: electron transport chain	3.54E-03
46	GO:0007186: G-protein coupled receptor signaling pathway	3.54E-03
47	GO:0016051: carbohydrate biosynthetic process	3.78E-03
48	GO:0051865: protein autoubiquitination	4.00E-03
49	GO:0009638: phototropism	4.49E-03
50	GO:0009826: unidimensional cell growth	4.50E-03
51	GO:0043069: negative regulation of programmed cell death	4.99E-03
52	GO:0007049: cell cycle	5.43E-03
53	GO:0009750: response to fructose	5.52E-03
54	GO:0016925: protein sumoylation	6.06E-03
55	GO:0016024: CDP-diacylglycerol biosynthetic process	6.06E-03
56	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	6.48E-03
57	GO:0010200: response to chitin	6.48E-03
58	GO:2000028: regulation of photoperiodism, flowering	6.61E-03
59	GO:0018107: peptidyl-threonine phosphorylation	6.61E-03
60	GO:0034605: cellular response to heat	7.20E-03
61	GO:0010143: cutin biosynthetic process	7.20E-03
62	GO:0009969: xyloglucan biosynthetic process	7.79E-03
63	GO:0009225: nucleotide-sugar metabolic process	7.79E-03
64	GO:0010167: response to nitrate	7.79E-03
65	GO:0005985: sucrose metabolic process	7.79E-03
66	GO:0010025: wax biosynthetic process	8.41E-03
67	GO:0006833: water transport	8.41E-03
68	GO:0005992: trehalose biosynthetic process	9.03E-03
69	GO:0019953: sexual reproduction	9.69E-03
70	GO:0051726: regulation of cell cycle	9.89E-03
71	GO:0009742: brassinosteroid mediated signaling pathway	9.89E-03
72	GO:0009751: response to salicylic acid	1.00E-02
73	GO:0010017: red or far-red light signaling pathway	1.10E-02
74	GO:0080022: primary root development	1.39E-02
75	GO:0034220: ion transmembrane transport	1.39E-02
76	GO:0010087: phloem or xylem histogenesis	1.39E-02
77	GO:0048653: anther development	1.39E-02
78	GO:0009958: positive gravitropism	1.47E-02
79	GO:0006633: fatty acid biosynthetic process	1.47E-02
80	GO:0009749: response to glucose	1.62E-02
81	GO:0009791: post-embryonic development	1.62E-02
82	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.70E-02
83	GO:0048235: pollen sperm cell differentiation	1.78E-02
84	GO:0019760: glucosinolate metabolic process	1.95E-02
85	GO:0009738: abscisic acid-activated signaling pathway	2.02E-02
86	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.30E-02
87	GO:0006468: protein phosphorylation	2.31E-02
88	GO:0016311: dephosphorylation	2.58E-02
89	GO:0048767: root hair elongation	2.77E-02
90	GO:0010218: response to far red light	2.87E-02
91	GO:0009723: response to ethylene	2.90E-02
92	GO:0048527: lateral root development	2.96E-02
93	GO:0007568: aging	2.96E-02
94	GO:0010114: response to red light	3.79E-02
95	GO:0009744: response to sucrose	3.79E-02
96	GO:0031347: regulation of defense response	4.34E-02
97	GO:0009664: plant-type cell wall organization	4.45E-02
98	GO:0006629: lipid metabolic process	4.57E-02
99	GO:0009809: lignin biosynthetic process	4.68E-02
100	GO:0006486: protein glycosylation	4.68E-02
101	GO:0009585: red, far-red light phototransduction	4.68E-02
102	GO:0051603: proteolysis involved in cellular protein catabolic process	4.80E-02
103	GO:0009753: response to jasmonic acid	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0050613: delta14-sterol reductase activity	0.00E+00
2	GO:0003838: sterol 24-C-methyltransferase activity	1.73E-04
3	GO:0080132: fatty acid alpha-hydroxylase activity	1.73E-04
4	GO:0048531: beta-1,3-galactosyltransferase activity	3.92E-04
5	GO:0001664: G-protein coupled receptor binding	6.40E-04
6	GO:0031683: G-protein beta/gamma-subunit complex binding	6.40E-04
7	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	8.83E-04
8	GO:0001872: (1->3)-beta-D-glucan binding	9.13E-04
9	GO:0033843: xyloglucan 6-xylosyltransferase activity	9.13E-04
10	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	9.13E-04
11	GO:0050378: UDP-glucuronate 4-epimerase activity	1.21E-03
12	GO:0019901: protein kinase binding	1.50E-03
13	GO:0031386: protein tag	1.54E-03
14	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.60E-03
15	GO:0016758: transferase activity, transferring hexosyl groups	1.74E-03
16	GO:0035252: UDP-xylosyltransferase activity	1.89E-03
17	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.89E-03
18	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.89E-03
19	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.92E-03
20	GO:0016759: cellulose synthase activity	1.93E-03
21	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.05E-03
22	GO:0016413: O-acetyltransferase activity	2.17E-03
23	GO:0016621: cinnamoyl-CoA reductase activity	2.67E-03
24	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.70E-03
25	GO:0030247: polysaccharide binding	2.70E-03
26	GO:0004564: beta-fructofuranosidase activity	3.09E-03
27	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.29E-03
28	GO:0008271: secondary active sulfate transmembrane transporter activity	3.54E-03
29	GO:0016757: transferase activity, transferring glycosyl groups	4.03E-03
30	GO:0044212: transcription regulatory region DNA binding	4.06E-03
31	GO:0004575: sucrose alpha-glucosidase activity	4.49E-03
32	GO:0004805: trehalose-phosphatase activity	4.99E-03
33	GO:0004864: protein phosphatase inhibitor activity	4.99E-03
34	GO:0004860: protein kinase inhibitor activity	5.52E-03
35	GO:0015116: sulfate transmembrane transporter activity	6.06E-03
36	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	7.20E-03
37	GO:0004871: signal transducer activity	8.28E-03
38	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	8.41E-03
39	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	8.41E-03
40	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	8.41E-03
41	GO:0008134: transcription factor binding	9.03E-03
42	GO:0009055: electron carrier activity	1.11E-02
43	GO:0004872: receptor activity	1.62E-02
44	GO:0003824: catalytic activity	1.70E-02
45	GO:0051015: actin filament binding	1.87E-02
46	GO:0016791: phosphatase activity	1.95E-02
47	GO:0005200: structural constituent of cytoskeleton	2.04E-02
48	GO:0015250: water channel activity	2.21E-02
49	GO:0004674: protein serine/threonine kinase activity	2.40E-02
50	GO:0004672: protein kinase activity	2.62E-02
51	GO:0005507: copper ion binding	3.27E-02
52	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	3.72E-02
53	GO:0004185: serine-type carboxypeptidase activity	3.79E-02
54	GO:0051537: 2 iron, 2 sulfur cluster binding	4.01E-02
55	GO:0015293: symporter activity	4.12E-02
56	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	4.13E-02
57	GO:0003924: GTPase activity	4.57E-02
58	GO:0016298: lipase activity	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0031225: anchored component of membrane	2.47E-07
2	GO:0009505: plant-type cell wall	2.22E-06
3	GO:0046658: anchored component of plasma membrane	8.66E-06
4	GO:0009506: plasmodesma	3.38E-05
5	GO:0005794: Golgi apparatus	1.41E-04
6	GO:0005886: plasma membrane	4.42E-04
7	GO:0000139: Golgi membrane	5.38E-04
8	GO:0016021: integral component of membrane	6.86E-04
9	GO:0005775: vacuolar lumen	9.13E-04
10	GO:0005618: cell wall	5.61E-03
11	GO:0030176: integral component of endoplasmic reticulum membrane	7.79E-03
12	GO:0005576: extracellular region	8.00E-03
13	GO:0005789: endoplasmic reticulum membrane	8.51E-03
14	GO:0048046: apoplast	1.35E-02
15	GO:0032580: Golgi cisterna membrane	1.95E-02
16	GO:0030529: intracellular ribonucleoprotein complex	2.21E-02
17	GO:0005773: vacuole	2.76E-02
18	GO:0000325: plant-type vacuole	2.96E-02
19	GO:0000786: nucleosome	3.06E-02
20	GO:0031902: late endosome membrane	3.58E-02
21	GO:0005802: trans-Golgi network	3.79E-02
22	GO:0005856: cytoskeleton	4.12E-02
23	GO:0005768: endosome	4.43E-02