co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G03495

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901038: cyanidin 3-O-glucoside metabolic process	0.00E+00
2	GO:0009264: deoxyribonucleotide catabolic process	0.00E+00
3	GO:0009813: flavonoid biosynthetic process	3.17E-09
4	GO:0080167: response to karrikin	1.03E-08
5	GO:0051555: flavonol biosynthetic process	2.16E-08
6	GO:0009718: anthocyanin-containing compound biosynthetic process	6.03E-08
7	GO:0010224: response to UV-B	1.38E-06
8	GO:0009698: phenylpropanoid metabolic process	3.48E-06
9	GO:0009963: positive regulation of flavonoid biosynthetic process	5.76E-06
10	GO:0009411: response to UV	2.33E-05
11	GO:0050691: regulation of defense response to virus by host	1.12E-04
12	GO:1900384: regulation of flavonol biosynthetic process	1.12E-04
13	GO:0048438: floral whorl development	1.12E-04
14	GO:1901537: positive regulation of DNA demethylation	1.12E-04
15	GO:0031539: positive regulation of anthocyanin metabolic process	1.12E-04
16	GO:0046244: salicylic acid catabolic process	1.12E-04
17	GO:0007154: cell communication	2.61E-04
18	GO:0010220: positive regulation of vernalization response	2.61E-04
19	GO:0080183: response to photooxidative stress	2.61E-04
20	GO:1900386: positive regulation of flavonol biosynthetic process	2.61E-04
21	GO:0071395: cellular response to jasmonic acid stimulus	2.61E-04
22	GO:0009225: nucleotide-sugar metabolic process	3.01E-04
23	GO:0071555: cell wall organization	3.12E-04
24	GO:0031347: regulation of defense response	3.58E-04
25	GO:0009733: response to auxin	3.98E-04
26	GO:1901562: response to paraquat	4.32E-04
27	GO:0010253: UDP-rhamnose biosynthetic process	4.32E-04
28	GO:0040009: regulation of growth rate	4.32E-04
29	GO:0010581: regulation of starch biosynthetic process	4.32E-04
30	GO:0009800: cinnamic acid biosynthetic process	6.19E-04
31	GO:0042823: pyridoxal phosphate biosynthetic process	6.19E-04
32	GO:0045489: pectin biosynthetic process	7.34E-04
33	GO:0034613: cellular protein localization	8.23E-04
34	GO:0046283: anthocyanin-containing compound metabolic process	1.04E-03
35	GO:0009435: NAD biosynthetic process	1.04E-03
36	GO:0016094: polyprenol biosynthetic process	1.04E-03
37	GO:0019408: dolichol biosynthetic process	1.04E-03
38	GO:0071368: cellular response to cytokinin stimulus	1.04E-03
39	GO:0010304: PSII associated light-harvesting complex II catabolic process	1.27E-03
40	GO:0042732: D-xylose metabolic process	1.27E-03
41	GO:0010315: auxin efflux	1.27E-03
42	GO:0006559: L-phenylalanine catabolic process	1.27E-03
43	GO:0000060: protein import into nucleus, translocation	1.27E-03
44	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.35E-03
45	GO:0009739: response to gibberellin	1.46E-03
46	GO:0010076: maintenance of floral meristem identity	1.52E-03
47	GO:0010077: maintenance of inflorescence meristem identity	1.52E-03
48	GO:0030091: protein repair	2.06E-03
49	GO:0009787: regulation of abscisic acid-activated signaling pathway	2.06E-03
50	GO:0009819: drought recovery	2.06E-03
51	GO:0010099: regulation of photomorphogenesis	2.35E-03
52	GO:0009699: phenylpropanoid biosynthetic process	2.35E-03
53	GO:0015996: chlorophyll catabolic process	2.35E-03
54	GO:0009056: catabolic process	2.66E-03
55	GO:0009926: auxin polar transport	2.68E-03
56	GO:0042546: cell wall biogenesis	2.78E-03
57	GO:0043069: negative regulation of programmed cell death	3.30E-03
58	GO:0045454: cell redox homeostasis	3.61E-03
59	GO:0000272: polysaccharide catabolic process	3.65E-03
60	GO:0000038: very long-chain fatty acid metabolic process	3.65E-03
61	GO:0009909: regulation of flower development	3.97E-03
62	GO:0016925: protein sumoylation	4.00E-03
63	GO:0016024: CDP-diacylglycerol biosynthetic process	4.00E-03
64	GO:0010582: floral meristem determinacy	4.00E-03
65	GO:0055114: oxidation-reduction process	4.28E-03
66	GO:0046274: lignin catabolic process	4.36E-03
67	GO:0018107: peptidyl-threonine phosphorylation	4.36E-03
68	GO:0010223: secondary shoot formation	4.74E-03
69	GO:0010540: basipetal auxin transport	4.74E-03
70	GO:0009934: regulation of meristem structural organization	4.74E-03
71	GO:0010143: cutin biosynthetic process	4.74E-03
72	GO:0002237: response to molecule of bacterial origin	4.74E-03
73	GO:0019853: L-ascorbic acid biosynthetic process	5.13E-03
74	GO:0042753: positive regulation of circadian rhythm	5.52E-03
75	GO:0006487: protein N-linked glycosylation	5.93E-03
76	GO:0030154: cell differentiation	6.71E-03
77	GO:0010017: red or far-red light signaling pathway	7.22E-03
78	GO:0040007: growth	7.67E-03
79	GO:0042127: regulation of cell proliferation	8.13E-03
80	GO:0010584: pollen exine formation	8.13E-03
81	GO:0019722: calcium-mediated signaling	8.13E-03
82	GO:0016117: carotenoid biosynthetic process	8.60E-03
83	GO:0000271: polysaccharide biosynthetic process	9.08E-03
84	GO:0009958: positive gravitropism	9.57E-03
85	GO:0009741: response to brassinosteroid	9.57E-03
86	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.11E-02
87	GO:0002229: defense response to oomycetes	1.11E-02
88	GO:1901657: glycosyl compound metabolic process	1.22E-02
89	GO:0006464: cellular protein modification process	1.27E-02
90	GO:0010252: auxin homeostasis	1.27E-02
91	GO:0007267: cell-cell signaling	1.33E-02
92	GO:0001666: response to hypoxia	1.44E-02
93	GO:0009911: positive regulation of flower development	1.44E-02
94	GO:0009860: pollen tube growth	1.47E-02
95	GO:0009723: response to ethylene	1.58E-02
96	GO:0048573: photoperiodism, flowering	1.62E-02
97	GO:0016311: dephosphorylation	1.68E-02
98	GO:0010311: lateral root formation	1.80E-02
99	GO:0009407: toxin catabolic process	1.86E-02
100	GO:0010218: response to far red light	1.86E-02
101	GO:0010119: regulation of stomatal movement	1.93E-02
102	GO:0016051: carbohydrate biosynthetic process	2.06E-02
103	GO:0010114: response to red light	2.46E-02
104	GO:0009640: photomorphogenesis	2.46E-02
105	GO:0009751: response to salicylic acid	2.47E-02
106	GO:0009636: response to toxic substance	2.67E-02
107	GO:0008152: metabolic process	2.76E-02
108	GO:0000165: MAPK cascade	2.82E-02
109	GO:0009809: lignin biosynthetic process	3.04E-02
110	GO:0006486: protein glycosylation	3.04E-02
111	GO:0009585: red, far-red light phototransduction	3.04E-02
112	GO:0009734: auxin-activated signaling pathway	3.52E-02
113	GO:0009740: gibberellic acid mediated signaling pathway	3.75E-02
114	GO:0042545: cell wall modification	3.83E-02
115	GO:0018105: peptidyl-serine phosphorylation	3.99E-02
116	GO:0035556: intracellular signal transduction	4.67E-02
117	GO:0006468: protein phosphorylation	4.68E-02
118	GO:0009845: seed germination	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0047213: anthocyanidin 3-O-glucosyltransferase activity	0.00E+00
2	GO:0102580: cyanidin 3-O-glucoside 2-O''-xylosyltransferase activity	0.00E+00
3	GO:0047890: flavanone 4-reductase activity	0.00E+00
4	GO:0045486: naringenin 3-dioxygenase activity	0.00E+00
5	GO:0080018: anthocyanin 5-O-glucosyltransferase activity	0.00E+00
6	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
7	GO:0008734: L-aspartate oxidase activity	0.00E+00
8	GO:0047918: GDP-mannose 3,5-epimerase activity	0.00E+00
9	GO:0016711: flavonoid 3'-monooxygenase activity	0.00E+00
10	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
11	GO:0045552: dihydrokaempferol 4-reductase activity	0.00E+00
12	GO:0045430: chalcone isomerase activity	1.09E-05
13	GO:0008194: UDP-glycosyltransferase activity	1.66E-05
14	GO:0080043: quercetin 3-O-glucosyltransferase activity	5.15E-05
15	GO:0080044: quercetin 7-O-glucosyltransferase activity	5.15E-05
16	GO:0016757: transferase activity, transferring glycosyl groups	6.41E-05
17	GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity	1.12E-04
18	GO:0080132: fatty acid alpha-hydroxylase activity	1.12E-04
19	GO:0004566: beta-glucuronidase activity	2.61E-04
20	GO:0008460: dTDP-glucose 4,6-dehydratase activity	2.61E-04
21	GO:0010280: UDP-L-rhamnose synthase activity	2.61E-04
22	GO:0050377: UDP-glucose 4,6-dehydratase activity	2.61E-04
23	GO:0050736: O-malonyltransferase activity	2.61E-04
24	GO:0048531: beta-1,3-galactosyltransferase activity	2.61E-04
25	GO:0031418: L-ascorbic acid binding	3.73E-04
26	GO:0043169: cation binding	4.32E-04
27	GO:0045548: phenylalanine ammonia-lyase activity	4.32E-04
28	GO:0008253: 5'-nucleotidase activity	4.32E-04
29	GO:0035251: UDP-glucosyltransferase activity	4.53E-04
30	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	6.19E-04
31	GO:0098599: palmitoyl hydrolase activity	8.23E-04
32	GO:0046527: glucosyltransferase activity	8.23E-04
33	GO:0080032: methyl jasmonate esterase activity	8.23E-04
34	GO:0002094: polyprenyltransferase activity	1.04E-03
35	GO:0031386: protein tag	1.04E-03
36	GO:0045431: flavonol synthase activity	1.04E-03
37	GO:0045547: dehydrodolichyl diphosphate synthase activity	1.04E-03
38	GO:0035252: UDP-xylosyltransferase activity	1.27E-03
39	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.27E-03
40	GO:0080030: methyl indole-3-acetate esterase activity	1.27E-03
41	GO:0008474: palmitoyl-(protein) hydrolase activity	1.27E-03
42	GO:0008429: phosphatidylethanolamine binding	1.27E-03
43	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.27E-03
44	GO:0016161: beta-amylase activity	1.52E-03
45	GO:0003824: catalytic activity	1.64E-03
46	GO:0019899: enzyme binding	1.78E-03
47	GO:0102425: myricetin 3-O-glucosyltransferase activity	1.78E-03
48	GO:0102360: daphnetin 3-O-glucosyltransferase activity	1.78E-03
49	GO:0016621: cinnamoyl-CoA reductase activity	1.78E-03
50	GO:0047893: flavonol 3-O-glucosyltransferase activity	2.06E-03
51	GO:0016491: oxidoreductase activity	2.26E-03
52	GO:0016207: 4-coumarate-CoA ligase activity	2.66E-03
53	GO:0009672: auxin:proton symporter activity	2.97E-03
54	GO:0008327: methyl-CpG binding	3.65E-03
55	GO:0010329: auxin efflux transmembrane transporter activity	4.36E-03
56	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	4.74E-03
57	GO:0016758: transferase activity, transferring hexosyl groups	6.21E-03
58	GO:0004176: ATP-dependent peptidase activity	6.78E-03
59	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	7.22E-03
60	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	7.26E-03
61	GO:0050662: coenzyme binding	1.01E-02
62	GO:0016853: isomerase activity	1.01E-02
63	GO:0016759: cellulose synthase activity	1.27E-02
64	GO:0016791: phosphatase activity	1.27E-02
65	GO:0008237: metallopeptidase activity	1.33E-02
66	GO:0016788: hydrolase activity, acting on ester bonds	1.39E-02
67	GO:0008375: acetylglucosaminyltransferase activity	1.56E-02
68	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.62E-02
69	GO:0102483: scopolin beta-glucosidase activity	1.62E-02
70	GO:0030247: polysaccharide binding	1.62E-02
71	GO:0004222: metalloendopeptidase activity	1.86E-02
72	GO:0052689: carboxylic ester hydrolase activity	1.87E-02
73	GO:0008422: beta-glucosidase activity	2.19E-02
74	GO:0004364: glutathione transferase activity	2.39E-02
75	GO:0051287: NAD binding	2.82E-02
76	GO:0003690: double-stranded DNA binding	3.12E-02
77	GO:0045330: aspartyl esterase activity	3.27E-02
78	GO:0016874: ligase activity	3.75E-02
79	GO:0030599: pectinesterase activity	3.75E-02
80	GO:0022857: transmembrane transporter activity	3.75E-02
81	GO:0004672: protein kinase activity	3.84E-02
82	GO:0016887: ATPase activity	3.87E-02
83	GO:0015035: protein disulfide oxidoreductase activity	3.99E-02
84	GO:0016746: transferase activity, transferring acyl groups	3.99E-02

Rank	GO Term	Adjusted P value
1	GO:0042406: extrinsic component of endoplasmic reticulum membrane	2.44E-06
2	GO:0043231: intracellular membrane-bounded organelle	9.87E-04
3	GO:0010369: chromocenter	1.52E-03
4	GO:0009505: plant-type cell wall	2.07E-03
5	GO:0005765: lysosomal membrane	3.65E-03
6	GO:0009705: plant-type vacuole membrane	8.80E-03
7	GO:0000139: Golgi membrane	9.33E-03
8	GO:0005615: extracellular space	9.85E-03
9	GO:0071944: cell periphery	1.22E-02
10	GO:0031225: anchored component of membrane	1.72E-02
11	GO:0009507: chloroplast	2.99E-02
12	GO:0005737: cytoplasm	3.71E-02
13	GO:0005783: endoplasmic reticulum	3.97E-02
14	GO:0005789: endoplasmic reticulum membrane	4.03E-02
15	GO:0010287: plastoglobule	4.42E-02
16	GO:0005623: cell	4.68E-02