co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G02930

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006182: cGMP biosynthetic process	0.00E+00
2	GO:0072722: response to amitrole	0.00E+00
3	GO:0043269: regulation of ion transport	0.00E+00
4	GO:0015690: aluminum cation transport	0.00E+00
5	GO:0009617: response to bacterium	1.11E-11
6	GO:0010120: camalexin biosynthetic process	7.88E-11
7	GO:0071456: cellular response to hypoxia	1.38E-08
8	GO:0042742: defense response to bacterium	3.30E-08
9	GO:0009682: induced systemic resistance	8.53E-08
10	GO:0010150: leaf senescence	1.11E-07
11	GO:0050832: defense response to fungus	9.27E-07
12	GO:0055114: oxidation-reduction process	1.67E-06
13	GO:0052544: defense response by callose deposition in cell wall	7.41E-06
14	GO:0019438: aromatic compound biosynthetic process	1.01E-05
15	GO:0000162: tryptophan biosynthetic process	2.15E-05
16	GO:0009697: salicylic acid biosynthetic process	3.07E-05
17	GO:0009759: indole glucosinolate biosynthetic process	4.59E-05
18	GO:0009625: response to insect	4.68E-05
19	GO:0051245: negative regulation of cellular defense response	1.54E-04
20	GO:0009700: indole phytoalexin biosynthetic process	1.54E-04
21	GO:0010230: alternative respiration	1.54E-04
22	GO:1901183: positive regulation of camalexin biosynthetic process	1.54E-04
23	GO:0010200: response to chitin	1.59E-04
24	GO:0010112: regulation of systemic acquired resistance	1.70E-04
25	GO:0009627: systemic acquired resistance	2.09E-04
26	GO:0006032: chitin catabolic process	2.40E-04
27	GO:0000272: polysaccharide catabolic process	2.81E-04
28	GO:0009407: toxin catabolic process	2.95E-04
29	GO:0006952: defense response	3.16E-04
30	GO:0002213: defense response to insect	3.23E-04
31	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	3.51E-04
32	GO:0007166: cell surface receptor signaling pathway	4.20E-04
33	GO:0042343: indole glucosinolate metabolic process	4.65E-04
34	GO:0009636: response to toxic substance	5.71E-04
35	GO:0010272: response to silver ion	5.75E-04
36	GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening	5.75E-04
37	GO:0016998: cell wall macromolecule catabolic process	6.92E-04
38	GO:0006979: response to oxidative stress	7.89E-04
39	GO:0010116: positive regulation of abscisic acid biosynthetic process	8.23E-04
40	GO:0006468: protein phosphorylation	8.23E-04
41	GO:0002239: response to oomycetes	8.23E-04
42	GO:0006612: protein targeting to membrane	8.23E-04
43	GO:1901141: regulation of lignin biosynthetic process	1.09E-03
44	GO:0010363: regulation of plant-type hypersensitive response	1.09E-03
45	GO:0010508: positive regulation of autophagy	1.09E-03
46	GO:0080142: regulation of salicylic acid biosynthetic process	1.09E-03
47	GO:0009646: response to absence of light	1.19E-03
48	GO:0048544: recognition of pollen	1.19E-03
49	GO:0009851: auxin biosynthetic process	1.28E-03
50	GO:0000304: response to singlet oxygen	1.38E-03
51	GO:0010252: auxin homeostasis	1.64E-03
52	GO:0006561: proline biosynthetic process	1.70E-03
53	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.03E-03
54	GO:0009816: defense response to bacterium, incompatible interaction	2.07E-03
55	GO:1900056: negative regulation of leaf senescence	2.39E-03
56	GO:0070370: cellular heat acclimation	2.39E-03
57	GO:1902074: response to salt	2.39E-03
58	GO:0008219: cell death	2.54E-03
59	GO:0009817: defense response to fungus, incompatible interaction	2.54E-03
60	GO:0009061: anaerobic respiration	2.77E-03
61	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.77E-03
62	GO:0009819: drought recovery	2.77E-03
63	GO:0030091: protein repair	2.77E-03
64	GO:0043562: cellular response to nitrogen levels	3.16E-03
65	GO:0009699: phenylpropanoid biosynthetic process	3.16E-03
66	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	3.16E-03
67	GO:0010204: defense response signaling pathway, resistance gene-independent	3.16E-03
68	GO:0045087: innate immune response	3.21E-03
69	GO:0009737: response to abscisic acid	3.44E-03
70	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	4.01E-03
71	GO:0051707: response to other organism	4.13E-03
72	GO:0009870: defense response signaling pathway, resistance gene-dependent	4.46E-03
73	GO:0009688: abscisic acid biosynthetic process	4.46E-03
74	GO:0043069: negative regulation of programmed cell death	4.46E-03
75	GO:0009089: lysine biosynthetic process via diaminopimelate	4.92E-03
76	GO:0044550: secondary metabolite biosynthetic process	5.60E-03
77	GO:0009718: anthocyanin-containing compound biosynthetic process	5.91E-03
78	GO:0034605: cellular response to heat	6.42E-03
79	GO:0010143: cutin biosynthetic process	6.42E-03
80	GO:0006541: glutamine metabolic process	6.42E-03
81	GO:0002237: response to molecule of bacterial origin	6.42E-03
82	GO:0010053: root epidermal cell differentiation	6.95E-03
83	GO:0009620: response to fungus	7.22E-03
84	GO:0010025: wax biosynthetic process	7.49E-03
85	GO:0032259: methylation	7.81E-03
86	GO:0005992: trehalose biosynthetic process	8.05E-03
87	GO:0009863: salicylic acid mediated signaling pathway	8.05E-03
88	GO:0080147: root hair cell development	8.05E-03
89	GO:2000377: regulation of reactive oxygen species metabolic process	8.05E-03
90	GO:0009751: response to salicylic acid	8.11E-03
91	GO:0048278: vesicle docking	9.22E-03
92	GO:0009814: defense response, incompatible interaction	9.82E-03
93	GO:0031348: negative regulation of defense response	9.82E-03
94	GO:0010227: floral organ abscission	1.04E-02
95	GO:0006012: galactose metabolic process	1.04E-02
96	GO:0010584: pollen exine formation	1.11E-02
97	GO:0009414: response to water deprivation	1.11E-02
98	GO:0070417: cellular response to cold	1.17E-02
99	GO:0042631: cellular response to water deprivation	1.24E-02
100	GO:0008360: regulation of cell shape	1.31E-02
101	GO:0010197: polar nucleus fusion	1.31E-02
102	GO:0061025: membrane fusion	1.37E-02
103	GO:0000302: response to reactive oxygen species	1.52E-02
104	GO:0009630: gravitropism	1.59E-02
105	GO:0016032: viral process	1.59E-02
106	GO:0019760: glucosinolate metabolic process	1.74E-02
107	GO:0009615: response to virus	1.97E-02
108	GO:0009607: response to biotic stimulus	2.05E-02
109	GO:0006906: vesicle fusion	2.13E-02
110	GO:0006970: response to osmotic stress	2.29E-02
111	GO:0009723: response to ethylene	2.46E-02
112	GO:0007568: aging	2.64E-02
113	GO:0080167: response to karrikin	2.64E-02
114	GO:0010119: regulation of stomatal movement	2.64E-02
115	GO:0009867: jasmonic acid mediated signaling pathway	2.81E-02
116	GO:0006099: tricarboxylic acid cycle	2.90E-02
117	GO:0006887: exocytosis	3.18E-02
118	GO:0006631: fatty acid metabolic process	3.18E-02
119	GO:0042542: response to hydrogen peroxide	3.27E-02
120	GO:0006855: drug transmembrane transport	3.76E-02
121	GO:0009846: pollen germination	3.96E-02
122	GO:0042538: hyperosmotic salinity response	3.96E-02
123	GO:0009733: response to auxin	4.75E-02
124	GO:0009626: plant-type hypersensitive response	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
2	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
3	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
4	GO:0010279: indole-3-acetic acid amido synthetase activity	1.88E-05
5	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.04E-05
6	GO:0005506: iron ion binding	2.82E-05
7	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.11E-05
8	GO:0009055: electron carrier activity	5.25E-05
9	GO:0050660: flavin adenine dinucleotide binding	1.28E-04
10	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.54E-04
11	GO:0033984: indole-3-glycerol-phosphate lyase activity	1.54E-04
12	GO:0031957: very long-chain fatty acid-CoA ligase activity	1.54E-04
13	GO:0010285: L,L-diaminopimelate aminotransferase activity	1.54E-04
14	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.54E-04
15	GO:0004674: protein serine/threonine kinase activity	2.19E-04
16	GO:0004568: chitinase activity	2.40E-04
17	GO:0008171: O-methyltransferase activity	2.40E-04
18	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.41E-04
19	GO:0004022: alcohol dehydrogenase (NAD) activity	3.67E-04
20	GO:0019825: oxygen binding	3.81E-04
21	GO:0016301: kinase activity	4.46E-04
22	GO:0008061: chitin binding	4.65E-04
23	GO:0004364: glutathione transferase activity	4.68E-04
24	GO:0004049: anthranilate synthase activity	5.75E-04
25	GO:0004324: ferredoxin-NADP+ reductase activity	5.75E-04
26	GO:0004383: guanylate cyclase activity	5.75E-04
27	GO:0004834: tryptophan synthase activity	1.09E-03
28	GO:0004031: aldehyde oxidase activity	1.09E-03
29	GO:0050302: indole-3-acetaldehyde oxidase activity	1.09E-03
30	GO:0016746: transferase activity, transferring acyl groups	1.15E-03
31	GO:0030246: carbohydrate binding	1.48E-03
32	GO:0005507: copper ion binding	1.64E-03
33	GO:0004029: aldehyde dehydrogenase (NAD) activity	1.70E-03
34	GO:0005516: calmodulin binding	1.80E-03
35	GO:0020037: heme binding	1.90E-03
36	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.02E-03
37	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.03E-03
38	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.03E-03
39	GO:0102391: decanoate--CoA ligase activity	2.03E-03
40	GO:0004656: procollagen-proline 4-dioxygenase activity	2.03E-03
41	GO:0030247: polysaccharide binding	2.30E-03
42	GO:0008143: poly(A) binding	2.39E-03
43	GO:0043295: glutathione binding	2.39E-03
44	GO:0004467: long-chain fatty acid-CoA ligase activity	2.39E-03
45	GO:0004034: aldose 1-epimerase activity	2.77E-03
46	GO:0004033: aldo-keto reductase (NADP) activity	2.77E-03
47	GO:0003843: 1,3-beta-D-glucan synthase activity	3.16E-03
48	GO:0071949: FAD binding	3.58E-03
49	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	4.01E-03
50	GO:0004713: protein tyrosine kinase activity	4.46E-03
51	GO:0004497: monooxygenase activity	5.03E-03
52	GO:0000175: 3'-5'-exoribonuclease activity	5.91E-03
53	GO:0004535: poly(A)-specific ribonuclease activity	6.42E-03
54	GO:0004867: serine-type endopeptidase inhibitor activity	6.95E-03
55	GO:0031418: L-ascorbic acid binding	8.05E-03
56	GO:0008408: 3'-5' exonuclease activity	9.22E-03
57	GO:0004540: ribonuclease activity	9.22E-03
58	GO:0005509: calcium ion binding	1.02E-02
59	GO:0005524: ATP binding	1.04E-02
60	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.11E-02
61	GO:0016853: isomerase activity	1.37E-02
62	GO:0016491: oxidoreductase activity	1.75E-02
63	GO:0008483: transaminase activity	1.81E-02
64	GO:0008168: methyltransferase activity	2.05E-02
65	GO:0004683: calmodulin-dependent protein kinase activity	2.21E-02
66	GO:0015238: drug transmembrane transporter activity	2.46E-02
67	GO:0008233: peptidase activity	2.59E-02
68	GO:0030145: manganese ion binding	2.64E-02
69	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.81E-02
70	GO:0003746: translation elongation factor activity	2.81E-02
71	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.99E-02
72	GO:0000149: SNARE binding	2.99E-02
73	GO:0050661: NADP binding	3.09E-02
74	GO:0005484: SNAP receptor activity	3.37E-02
75	GO:0051537: 2 iron, 2 sulfur cluster binding	3.56E-02
76	GO:0045735: nutrient reservoir activity	4.69E-02
77	GO:0043565: sequence-specific DNA binding	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	8.49E-06
2	GO:0045252: oxoglutarate dehydrogenase complex	1.54E-04
3	GO:0030014: CCR4-NOT complex	1.54E-04
4	GO:0005829: cytosol	2.84E-04
5	GO:0005901: caveola	3.51E-04
6	GO:0005853: eukaryotic translation elongation factor 1 complex	5.75E-04
7	GO:0000325: plant-type vacuole	2.93E-03
8	GO:0000148: 1,3-beta-D-glucan synthase complex	3.16E-03
9	GO:0010494: cytoplasmic stress granule	3.58E-03
10	GO:0016021: integral component of membrane	6.30E-03
11	GO:0005618: cell wall	1.16E-02
12	GO:0005783: endoplasmic reticulum	1.32E-02
13	GO:0009504: cell plate	1.44E-02
14	GO:0009505: plant-type cell wall	1.62E-02
15	GO:0046658: anchored component of plasma membrane	1.82E-02
16	GO:0016020: membrane	1.82E-02
17	GO:0048046: apoplast	2.82E-02
18	GO:0031225: anchored component of membrane	2.99E-02
19	GO:0031201: SNARE complex	3.18E-02