co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G02816

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901038: cyanidin 3-O-glucoside metabolic process	0.00E+00
2	GO:0010423: negative regulation of brassinosteroid biosynthetic process	0.00E+00
3	GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)	0.00E+00
4	GO:0009264: deoxyribonucleotide catabolic process	0.00E+00
5	GO:0006971: hypotonic response	0.00E+00
6	GO:0006792: regulation of sulfur utilization	0.00E+00
7	GO:0009751: response to salicylic acid	1.61E-06
8	GO:0009813: flavonoid biosynthetic process	9.78E-06
9	GO:0030154: cell differentiation	1.63E-05
10	GO:0009739: response to gibberellin	2.55E-05
11	GO:0080167: response to karrikin	8.55E-05
12	GO:0010200: response to chitin	9.18E-05
13	GO:0009733: response to auxin	1.20E-04
14	GO:0050691: regulation of defense response to virus by host	1.27E-04
15	GO:0033481: galacturonate biosynthetic process	1.27E-04
16	GO:0048438: floral whorl development	1.27E-04
17	GO:0051555: flavonol biosynthetic process	1.83E-04
18	GO:0009698: phenylpropanoid metabolic process	2.14E-04
19	GO:0009753: response to jasmonic acid	2.19E-04
20	GO:0009718: anthocyanin-containing compound biosynthetic process	2.83E-04
21	GO:2000693: positive regulation of seed maturation	2.94E-04
22	GO:0007154: cell communication	2.94E-04
23	GO:0071497: cellular response to freezing	2.94E-04
24	GO:0010220: positive regulation of vernalization response	2.94E-04
25	GO:0080183: response to photooxidative stress	2.94E-04
26	GO:1900386: positive regulation of flavonol biosynthetic process	2.94E-04
27	GO:0071395: cellular response to jasmonic acid stimulus	2.94E-04
28	GO:0071712: ER-associated misfolded protein catabolic process	2.94E-04
29	GO:0009225: nucleotide-sugar metabolic process	3.60E-04
30	GO:0006355: regulation of transcription, DNA-templated	4.08E-04
31	GO:0031347: regulation of defense response	4.51E-04
32	GO:0080168: abscisic acid transport	4.86E-04
33	GO:1901562: response to paraquat	4.86E-04
34	GO:0010253: UDP-rhamnose biosynthetic process	4.86E-04
35	GO:0040009: regulation of growth rate	4.86E-04
36	GO:0019419: sulfate reduction	4.86E-04
37	GO:0010224: response to UV-B	5.40E-04
38	GO:0009723: response to ethylene	5.60E-04
39	GO:2000022: regulation of jasmonic acid mediated signaling pathway	5.89E-04
40	GO:0009411: response to UV	6.40E-04
41	GO:0009650: UV protection	6.95E-04
42	GO:1902358: sulfate transmembrane transport	6.95E-04
43	GO:0009963: positive regulation of flavonoid biosynthetic process	6.95E-04
44	GO:0045489: pectin biosynthetic process	8.70E-04
45	GO:0034613: cellular protein localization	9.21E-04
46	GO:0009435: NAD biosynthetic process	1.16E-03
47	GO:0010438: cellular response to sulfur starvation	1.16E-03
48	GO:0016094: polyprenol biosynthetic process	1.16E-03
49	GO:0071493: cellular response to UV-B	1.16E-03
50	GO:0019408: dolichol biosynthetic process	1.16E-03
51	GO:0071368: cellular response to cytokinin stimulus	1.16E-03
52	GO:0010304: PSII associated light-harvesting complex II catabolic process	1.43E-03
53	GO:0042732: D-xylose metabolic process	1.43E-03
54	GO:0009267: cellular response to starvation	1.43E-03
55	GO:0010315: auxin efflux	1.43E-03
56	GO:0000060: protein import into nucleus, translocation	1.43E-03
57	GO:0006357: regulation of transcription from RNA polymerase II promoter	1.70E-03
58	GO:0010076: maintenance of floral meristem identity	1.71E-03
59	GO:0010077: maintenance of inflorescence meristem identity	1.71E-03
60	GO:0048573: photoperiodism, flowering	1.78E-03
61	GO:0071555: cell wall organization	1.91E-03
62	GO:0006351: transcription, DNA-templated	1.95E-03
63	GO:0050829: defense response to Gram-negative bacterium	2.01E-03
64	GO:0010439: regulation of glucosinolate biosynthetic process	2.32E-03
65	GO:2000070: regulation of response to water deprivation	2.32E-03
66	GO:0031540: regulation of anthocyanin biosynthetic process	2.32E-03
67	GO:0030162: regulation of proteolysis	2.32E-03
68	GO:2000031: regulation of salicylic acid mediated signaling pathway	2.65E-03
69	GO:0010099: regulation of photomorphogenesis	2.65E-03
70	GO:0015996: chlorophyll catabolic process	2.65E-03
71	GO:0009926: auxin polar transport	3.19E-03
72	GO:0045893: positive regulation of transcription, DNA-templated	3.27E-03
73	GO:0042546: cell wall biogenesis	3.32E-03
74	GO:0000103: sulfate assimilation	3.73E-03
75	GO:0043069: negative regulation of programmed cell death	3.73E-03
76	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.85E-03
77	GO:1903507: negative regulation of nucleic acid-templated transcription	4.12E-03
78	GO:0000272: polysaccharide catabolic process	4.12E-03
79	GO:0010015: root morphogenesis	4.12E-03
80	GO:0000038: very long-chain fatty acid metabolic process	4.12E-03
81	GO:0016925: protein sumoylation	4.52E-03
82	GO:0016024: CDP-diacylglycerol biosynthetic process	4.52E-03
83	GO:0010582: floral meristem determinacy	4.52E-03
84	GO:0045454: cell redox homeostasis	4.53E-03
85	GO:0009909: regulation of flower development	4.74E-03
86	GO:0018107: peptidyl-threonine phosphorylation	4.93E-03
87	GO:0010223: secondary shoot formation	5.36E-03
88	GO:0010540: basipetal auxin transport	5.36E-03
89	GO:0009934: regulation of meristem structural organization	5.36E-03
90	GO:0034605: cellular response to heat	5.36E-03
91	GO:0010143: cutin biosynthetic process	5.36E-03
92	GO:0002237: response to molecule of bacterial origin	5.36E-03
93	GO:0006629: lipid metabolic process	5.91E-03
94	GO:0006487: protein N-linked glycosylation	6.71E-03
95	GO:0019344: cysteine biosynthetic process	6.71E-03
96	GO:0009845: seed germination	8.25E-03
97	GO:0040007: growth	8.69E-03
98	GO:0042127: regulation of cell proliferation	9.21E-03
99	GO:0010584: pollen exine formation	9.21E-03
100	GO:0019722: calcium-mediated signaling	9.21E-03
101	GO:0016117: carotenoid biosynthetic process	9.75E-03
102	GO:0000271: polysaccharide biosynthetic process	1.03E-02
103	GO:0007623: circadian rhythm	1.05E-02
104	GO:0009741: response to brassinosteroid	1.09E-02
105	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.26E-02
106	GO:0002229: defense response to oomycetes	1.26E-02
107	GO:0035556: intracellular signal transduction	1.31E-02
108	GO:0009828: plant-type cell wall loosening	1.44E-02
109	GO:0019760: glucosinolate metabolic process	1.44E-02
110	GO:0010252: auxin homeostasis	1.44E-02
111	GO:0007267: cell-cell signaling	1.50E-02
112	GO:0001666: response to hypoxia	1.63E-02
113	GO:0009911: positive regulation of flower development	1.63E-02
114	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.70E-02
115	GO:0006970: response to osmotic stress	1.76E-02
116	GO:0016311: dephosphorylation	1.90E-02
117	GO:0010311: lateral root formation	2.04E-02
118	GO:0048527: lateral root development	2.19E-02
119	GO:0010119: regulation of stomatal movement	2.19E-02
120	GO:0016051: carbohydrate biosynthetic process	2.33E-02
121	GO:0009737: response to abscisic acid	2.41E-02
122	GO:0042542: response to hydrogen peroxide	2.72E-02
123	GO:0006855: drug transmembrane transport	3.12E-02
124	GO:0000165: MAPK cascade	3.20E-02
125	GO:0008152: metabolic process	3.30E-02
126	GO:0009809: lignin biosynthetic process	3.46E-02
127	GO:0006486: protein glycosylation	3.46E-02
128	GO:0009585: red, far-red light phototransduction	3.46E-02
129	GO:0009873: ethylene-activated signaling pathway	3.86E-02
130	GO:0009734: auxin-activated signaling pathway	4.21E-02
131	GO:0009409: response to cold	4.33E-02
132	GO:0042545: cell wall modification	4.35E-02
133	GO:0018105: peptidyl-serine phosphorylation	4.53E-02
134	GO:0009742: brassinosteroid mediated signaling pathway	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0047213: anthocyanidin 3-O-glucosyltransferase activity	0.00E+00
2	GO:0102580: cyanidin 3-O-glucoside 2-O''-xylosyltransferase activity	0.00E+00
3	GO:0047890: flavanone 4-reductase activity	0.00E+00
4	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
5	GO:0008734: L-aspartate oxidase activity	0.00E+00
6	GO:0045552: dihydrokaempferol 4-reductase activity	0.00E+00
7	GO:0045430: chalcone isomerase activity	1.36E-05
8	GO:0043565: sequence-specific DNA binding	2.14E-05
9	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.35E-05
10	GO:0045486: naringenin 3-dioxygenase activity	1.27E-04
11	GO:0080132: fatty acid alpha-hydroxylase activity	1.27E-04
12	GO:0090440: abscisic acid transporter activity	1.27E-04
13	GO:0009973: adenylyl-sulfate reductase activity	2.94E-04
14	GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity	2.94E-04
15	GO:0001047: core promoter binding	2.94E-04
16	GO:0044390: ubiquitin-like protein conjugating enzyme binding	2.94E-04
17	GO:0008460: dTDP-glucose 4,6-dehydratase activity	2.94E-04
18	GO:0033741: adenylyl-sulfate reductase (glutathione) activity	2.94E-04
19	GO:0010280: UDP-L-rhamnose synthase activity	2.94E-04
20	GO:0050377: UDP-glucose 4,6-dehydratase activity	2.94E-04
21	GO:0048531: beta-1,3-galactosyltransferase activity	2.94E-04
22	GO:0044212: transcription regulatory region DNA binding	4.56E-04
23	GO:0008253: 5'-nucleotidase activity	4.86E-04
24	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	6.95E-04
25	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	8.16E-04
26	GO:0050378: UDP-glucuronate 4-epimerase activity	9.21E-04
27	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	9.21E-04
28	GO:0080032: methyl jasmonate esterase activity	9.21E-04
29	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	9.58E-04
30	GO:0002094: polyprenyltransferase activity	1.16E-03
31	GO:0031386: protein tag	1.16E-03
32	GO:0045547: dehydrodolichyl diphosphate synthase activity	1.16E-03
33	GO:0035252: UDP-xylosyltransferase activity	1.43E-03
34	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.43E-03
35	GO:0080030: methyl indole-3-acetate esterase activity	1.43E-03
36	GO:0008429: phosphatidylethanolamine binding	1.43E-03
37	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.43E-03
38	GO:0016757: transferase activity, transferring glycosyl groups	1.56E-03
39	GO:0016161: beta-amylase activity	1.71E-03
40	GO:0004806: triglyceride lipase activity	1.78E-03
41	GO:0102425: myricetin 3-O-glucosyltransferase activity	2.01E-03
42	GO:0102360: daphnetin 3-O-glucosyltransferase activity	2.01E-03
43	GO:0016621: cinnamoyl-CoA reductase activity	2.01E-03
44	GO:0047893: flavonol 3-O-glucosyltransferase activity	2.32E-03
45	GO:0008271: secondary active sulfate transmembrane transporter activity	2.65E-03
46	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	2.65E-03
47	GO:0046982: protein heterodimerization activity	2.68E-03
48	GO:0016207: 4-coumarate-CoA ligase activity	3.00E-03
49	GO:0009672: auxin:proton symporter activity	3.36E-03
50	GO:0004860: protein kinase inhibitor activity	4.12E-03
51	GO:0015116: sulfate transmembrane transporter activity	4.52E-03
52	GO:0010329: auxin efflux transmembrane transporter activity	4.93E-03
53	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	5.36E-03
54	GO:0080043: quercetin 3-O-glucosyltransferase activity	5.56E-03
55	GO:0080044: quercetin 7-O-glucosyltransferase activity	5.56E-03
56	GO:0003712: transcription cofactor activity	5.80E-03
57	GO:0031418: L-ascorbic acid binding	6.71E-03
58	GO:0003714: transcription corepressor activity	6.71E-03
59	GO:0016758: transferase activity, transferring hexosyl groups	7.42E-03
60	GO:0004176: ATP-dependent peptidase activity	7.68E-03
61	GO:0035251: UDP-glucosyltransferase activity	7.68E-03
62	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	8.18E-03
63	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	8.68E-03
64	GO:0003824: catalytic activity	8.92E-03
65	GO:0004402: histone acetyltransferase activity	1.03E-02
66	GO:0005515: protein binding	1.09E-02
67	GO:0001085: RNA polymerase II transcription factor binding	1.09E-02
68	GO:0050662: coenzyme binding	1.14E-02
69	GO:0016853: isomerase activity	1.14E-02
70	GO:0008194: UDP-glycosyltransferase activity	1.18E-02
71	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.38E-02
72	GO:0016791: phosphatase activity	1.44E-02
73	GO:0008237: metallopeptidase activity	1.50E-02
74	GO:0003682: chromatin binding	1.73E-02
75	GO:0008375: acetylglucosaminyltransferase activity	1.77E-02
76	GO:0030247: polysaccharide binding	1.83E-02
77	GO:0015238: drug transmembrane transporter activity	2.04E-02
78	GO:0004222: metalloendopeptidase activity	2.11E-02
79	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.19E-02
80	GO:0003677: DNA binding	2.73E-02
81	GO:0015293: symporter activity	3.04E-02
82	GO:0031625: ubiquitin protein ligase binding	3.72E-02
83	GO:0045330: aspartyl esterase activity	3.72E-02
84	GO:0045735: nutrient reservoir activity	3.89E-02
85	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.98E-02
86	GO:0016491: oxidoreductase activity	4.18E-02
87	GO:0016874: ligase activity	4.26E-02
88	GO:0030599: pectinesterase activity	4.26E-02
89	GO:0004842: ubiquitin-protein transferase activity	4.44E-02
90	GO:0015035: protein disulfide oxidoreductase activity	4.53E-02
91	GO:0016746: transferase activity, transferring acyl groups	4.53E-02
92	GO:0016887: ATPase activity	4.62E-02
93	GO:0004672: protein kinase activity	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0090568: nuclear transcriptional repressor complex	0.00E+00
2	GO:0042406: extrinsic component of endoplasmic reticulum membrane	3.08E-06
3	GO:0036513: Derlin-1 retrotranslocation complex	6.95E-04
4	GO:0009505: plant-type cell wall	2.84E-03
5	GO:0005770: late endosome	1.09E-02
6	GO:0005615: extracellular space	1.18E-02
7	GO:0071944: cell periphery	1.38E-02
8	GO:0032580: Golgi cisterna membrane	1.44E-02
9	GO:0005667: transcription factor complex	1.77E-02
10	GO:0019005: SCF ubiquitin ligase complex	1.97E-02
11	GO:0005783: endoplasmic reticulum	2.05E-02
12	GO:0031225: anchored component of membrane	2.15E-02
13	GO:0005794: Golgi apparatus	2.30E-02
14	GO:0031902: late endosome membrane	2.64E-02
15	GO:0043231: intracellular membrane-bounded organelle	3.30E-02
16	GO:0000139: Golgi membrane	4.33E-02