GO Enrichment Analysis of Co-expressed Genes with
AT1G01620
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 2 | GO:0045176: apical protein localization | 0.00E+00 |
| 3 | GO:0042493: response to drug | 0.00E+00 |
| 4 | GO:0015976: carbon utilization | 8.92E-08 |
| 5 | GO:2000122: negative regulation of stomatal complex development | 2.11E-05 |
| 6 | GO:0010037: response to carbon dioxide | 2.11E-05 |
| 7 | GO:0042335: cuticle development | 7.84E-05 |
| 8 | GO:0046620: regulation of organ growth | 1.23E-04 |
| 9 | GO:0046520: sphingoid biosynthetic process | 1.64E-04 |
| 10 | GO:0000481: maturation of 5S rRNA | 1.64E-04 |
| 11 | GO:0034337: RNA folding | 1.64E-04 |
| 12 | GO:0071588: hydrogen peroxide mediated signaling pathway | 1.64E-04 |
| 13 | GO:0009416: response to light stimulus | 2.18E-04 |
| 14 | GO:0071555: cell wall organization | 2.23E-04 |
| 15 | GO:0010411: xyloglucan metabolic process | 2.55E-04 |
| 16 | GO:0009773: photosynthetic electron transport in photosystem I | 3.08E-04 |
| 17 | GO:0000038: very long-chain fatty acid metabolic process | 3.08E-04 |
| 18 | GO:0006633: fatty acid biosynthetic process | 3.39E-04 |
| 19 | GO:0006006: glucose metabolic process | 4.03E-04 |
| 20 | GO:0009926: auxin polar transport | 5.53E-04 |
| 21 | GO:0006833: water transport | 5.67E-04 |
| 22 | GO:0042546: cell wall biogenesis | 5.82E-04 |
| 23 | GO:0015840: urea transport | 6.11E-04 |
| 24 | GO:0009650: UV protection | 8.73E-04 |
| 25 | GO:0051639: actin filament network formation | 8.73E-04 |
| 26 | GO:0000413: protein peptidyl-prolyl isomerization | 1.13E-03 |
| 27 | GO:0051764: actin crosslink formation | 1.16E-03 |
| 28 | GO:0045489: pectin biosynthetic process | 1.21E-03 |
| 29 | GO:0046785: microtubule polymerization | 1.47E-03 |
| 30 | GO:0071554: cell wall organization or biogenesis | 1.49E-03 |
| 31 | GO:0009913: epidermal cell differentiation | 1.80E-03 |
| 32 | GO:0006596: polyamine biosynthetic process | 1.80E-03 |
| 33 | GO:0048759: xylem vessel member cell differentiation | 1.80E-03 |
| 34 | GO:0048827: phyllome development | 1.80E-03 |
| 35 | GO:0042549: photosystem II stabilization | 1.80E-03 |
| 36 | GO:0006810: transport | 1.99E-03 |
| 37 | GO:0042372: phylloquinone biosynthetic process | 2.17E-03 |
| 38 | GO:0009612: response to mechanical stimulus | 2.17E-03 |
| 39 | GO:0010019: chloroplast-nucleus signaling pathway | 2.17E-03 |
| 40 | GO:0009645: response to low light intensity stimulus | 2.55E-03 |
| 41 | GO:0030497: fatty acid elongation | 2.55E-03 |
| 42 | GO:0000160: phosphorelay signal transduction system | 2.93E-03 |
| 43 | GO:0008610: lipid biosynthetic process | 2.95E-03 |
| 44 | GO:0030091: protein repair | 2.95E-03 |
| 45 | GO:0032508: DNA duplex unwinding | 2.95E-03 |
| 46 | GO:0010119: regulation of stomatal movement | 3.21E-03 |
| 47 | GO:0009827: plant-type cell wall modification | 3.37E-03 |
| 48 | GO:0009932: cell tip growth | 3.37E-03 |
| 49 | GO:0006098: pentose-phosphate shunt | 3.81E-03 |
| 50 | GO:0009051: pentose-phosphate shunt, oxidative branch | 3.81E-03 |
| 51 | GO:0009638: phototropism | 4.27E-03 |
| 52 | GO:0042254: ribosome biogenesis | 4.42E-03 |
| 53 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 4.75E-03 |
| 54 | GO:0043069: negative regulation of programmed cell death | 4.75E-03 |
| 55 | GO:0019684: photosynthesis, light reaction | 5.25E-03 |
| 56 | GO:0009089: lysine biosynthetic process via diaminopimelate | 5.25E-03 |
| 57 | GO:1903507: negative regulation of nucleic acid-templated transcription | 5.25E-03 |
| 58 | GO:0006790: sulfur compound metabolic process | 5.77E-03 |
| 59 | GO:0009409: response to cold | 6.08E-03 |
| 60 | GO:0009736: cytokinin-activated signaling pathway | 6.10E-03 |
| 61 | GO:0010229: inflorescence development | 6.30E-03 |
| 62 | GO:0009725: response to hormone | 6.30E-03 |
| 63 | GO:0006094: gluconeogenesis | 6.30E-03 |
| 64 | GO:0006857: oligopeptide transport | 6.53E-03 |
| 65 | GO:0015979: photosynthesis | 6.70E-03 |
| 66 | GO:0019253: reductive pentose-phosphate cycle | 6.85E-03 |
| 67 | GO:0010207: photosystem II assembly | 6.85E-03 |
| 68 | GO:0010540: basipetal auxin transport | 6.85E-03 |
| 69 | GO:0010143: cutin biosynthetic process | 6.85E-03 |
| 70 | GO:0006096: glycolytic process | 7.21E-03 |
| 71 | GO:0046854: phosphatidylinositol phosphorylation | 7.41E-03 |
| 72 | GO:0010025: wax biosynthetic process | 8.00E-03 |
| 73 | GO:0006636: unsaturated fatty acid biosynthetic process | 8.00E-03 |
| 74 | GO:0019762: glucosinolate catabolic process | 8.00E-03 |
| 75 | GO:0000027: ribosomal large subunit assembly | 8.59E-03 |
| 76 | GO:0051017: actin filament bundle assembly | 8.59E-03 |
| 77 | GO:0005992: trehalose biosynthetic process | 8.59E-03 |
| 78 | GO:0006487: protein N-linked glycosylation | 8.59E-03 |
| 79 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.05E-02 |
| 80 | GO:0030245: cellulose catabolic process | 1.05E-02 |
| 81 | GO:0009411: response to UV | 1.11E-02 |
| 82 | GO:0006284: base-excision repair | 1.18E-02 |
| 83 | GO:0000271: polysaccharide biosynthetic process | 1.32E-02 |
| 84 | GO:0034220: ion transmembrane transport | 1.32E-02 |
| 85 | GO:0010087: phloem or xylem histogenesis | 1.32E-02 |
| 86 | GO:0048825: cotyledon development | 1.54E-02 |
| 87 | GO:0009733: response to auxin | 1.58E-02 |
| 88 | GO:0000302: response to reactive oxygen species | 1.62E-02 |
| 89 | GO:0010583: response to cyclopentenone | 1.70E-02 |
| 90 | GO:0009630: gravitropism | 1.70E-02 |
| 91 | GO:0010090: trichome morphogenesis | 1.77E-02 |
| 92 | GO:1901657: glycosyl compound metabolic process | 1.77E-02 |
| 93 | GO:0009611: response to wounding | 1.98E-02 |
| 94 | GO:0009911: positive regulation of flower development | 2.10E-02 |
| 95 | GO:0001666: response to hypoxia | 2.10E-02 |
| 96 | GO:0009826: unidimensional cell growth | 2.25E-02 |
| 97 | GO:0042128: nitrate assimilation | 2.27E-02 |
| 98 | GO:0005975: carbohydrate metabolic process | 2.48E-02 |
| 99 | GO:0009817: defense response to fungus, incompatible interaction | 2.54E-02 |
| 100 | GO:0030244: cellulose biosynthetic process | 2.54E-02 |
| 101 | GO:0009407: toxin catabolic process | 2.72E-02 |
| 102 | GO:0009834: plant-type secondary cell wall biogenesis | 2.72E-02 |
| 103 | GO:0009631: cold acclimation | 2.82E-02 |
| 104 | GO:0009867: jasmonic acid mediated signaling pathway | 3.01E-02 |
| 105 | GO:0016051: carbohydrate biosynthetic process | 3.01E-02 |
| 106 | GO:0034599: cellular response to oxidative stress | 3.10E-02 |
| 107 | GO:0006631: fatty acid metabolic process | 3.40E-02 |
| 108 | GO:0009640: photomorphogenesis | 3.60E-02 |
| 109 | GO:0006869: lipid transport | 3.79E-02 |
| 110 | GO:0008643: carbohydrate transport | 3.81E-02 |
| 111 | GO:0009636: response to toxic substance | 3.91E-02 |
| 112 | GO:0007165: signal transduction | 3.93E-02 |
| 113 | GO:0055114: oxidation-reduction process | 4.09E-02 |
| 114 | GO:0031347: regulation of defense response | 4.12E-02 |
| 115 | GO:0016042: lipid catabolic process | 4.14E-02 |
| 116 | GO:0042538: hyperosmotic salinity response | 4.23E-02 |
| 117 | GO:0006281: DNA repair | 4.26E-02 |
| 118 | GO:0009585: red, far-red light phototransduction | 4.45E-02 |
| 119 | GO:0009414: response to water deprivation | 4.49E-02 |
| 120 | GO:0009753: response to jasmonic acid | 4.56E-02 |
| 121 | GO:0042742: defense response to bacterium | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010487: thermospermine synthase activity | 0.00E+00 |
| 2 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 3 | GO:0004089: carbonate dehydratase activity | 1.38E-05 |
| 4 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 7.27E-05 |
| 5 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.20E-04 |
| 6 | GO:0080132: fatty acid alpha-hydroxylase activity | 1.64E-04 |
| 7 | GO:0015200: methylammonium transmembrane transporter activity | 1.64E-04 |
| 8 | GO:0016768: spermine synthase activity | 1.64E-04 |
| 9 | GO:0000170: sphingosine hydroxylase activity | 1.64E-04 |
| 10 | GO:0016413: O-acetyltransferase activity | 1.88E-04 |
| 11 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.55E-04 |
| 12 | GO:0042284: sphingolipid delta-4 desaturase activity | 3.73E-04 |
| 13 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 3.73E-04 |
| 14 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 3.73E-04 |
| 15 | GO:0042389: omega-3 fatty acid desaturase activity | 3.73E-04 |
| 16 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 5.67E-04 |
| 17 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 5.67E-04 |
| 18 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 5.67E-04 |
| 19 | GO:0050734: hydroxycinnamoyltransferase activity | 6.11E-04 |
| 20 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 6.11E-04 |
| 21 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.72E-04 |
| 22 | GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | 8.73E-04 |
| 23 | GO:0001872: (1->3)-beta-D-glucan binding | 8.73E-04 |
| 24 | GO:0015204: urea transmembrane transporter activity | 1.16E-03 |
| 25 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 1.16E-03 |
| 26 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.47E-03 |
| 27 | GO:0009922: fatty acid elongase activity | 1.47E-03 |
| 28 | GO:0000156: phosphorelay response regulator activity | 1.69E-03 |
| 29 | GO:0004130: cytochrome-c peroxidase activity | 1.80E-03 |
| 30 | GO:0016208: AMP binding | 1.80E-03 |
| 31 | GO:0016688: L-ascorbate peroxidase activity | 1.80E-03 |
| 32 | GO:0008519: ammonium transmembrane transporter activity | 1.80E-03 |
| 33 | GO:0004332: fructose-bisphosphate aldolase activity | 1.80E-03 |
| 34 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.91E-03 |
| 35 | GO:0015250: water channel activity | 2.14E-03 |
| 36 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 2.17E-03 |
| 37 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.17E-03 |
| 38 | GO:0051753: mannan synthase activity | 2.17E-03 |
| 39 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 2.17E-03 |
| 40 | GO:0102483: scopolin beta-glucosidase activity | 2.52E-03 |
| 41 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.37E-03 |
| 42 | GO:0008422: beta-glucosidase activity | 3.84E-03 |
| 43 | GO:0050661: NADP binding | 4.01E-03 |
| 44 | GO:0004805: trehalose-phosphatase activity | 4.75E-03 |
| 45 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.90E-03 |
| 46 | GO:0008794: arsenate reductase (glutaredoxin) activity | 5.25E-03 |
| 47 | GO:0004565: beta-galactosidase activity | 6.30E-03 |
| 48 | GO:0008081: phosphoric diester hydrolase activity | 6.30E-03 |
| 49 | GO:0052689: carboxylic ester hydrolase activity | 6.43E-03 |
| 50 | GO:0004871: signal transducer activity | 7.55E-03 |
| 51 | GO:0003714: transcription corepressor activity | 8.59E-03 |
| 52 | GO:0005528: FK506 binding | 8.59E-03 |
| 53 | GO:0016746: transferase activity, transferring acyl groups | 8.94E-03 |
| 54 | GO:0043424: protein histidine kinase binding | 9.21E-03 |
| 55 | GO:0009055: electron carrier activity | 1.02E-02 |
| 56 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.05E-02 |
| 57 | GO:0008810: cellulase activity | 1.11E-02 |
| 58 | GO:0008514: organic anion transmembrane transporter activity | 1.18E-02 |
| 59 | GO:0001085: RNA polymerase II transcription factor binding | 1.39E-02 |
| 60 | GO:0051015: actin filament binding | 1.77E-02 |
| 61 | GO:0042802: identical protein binding | 1.92E-02 |
| 62 | GO:0008375: acetylglucosaminyltransferase activity | 2.27E-02 |
| 63 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 2.27E-02 |
| 64 | GO:0030247: polysaccharide binding | 2.36E-02 |
| 65 | GO:0004683: calmodulin-dependent protein kinase activity | 2.36E-02 |
| 66 | GO:0016788: hydrolase activity, acting on ester bonds | 2.38E-02 |
| 67 | GO:0030145: manganese ion binding | 2.82E-02 |
| 68 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 2.82E-02 |
| 69 | GO:0003993: acid phosphatase activity | 3.10E-02 |
| 70 | GO:0004364: glutathione transferase activity | 3.50E-02 |
| 71 | GO:0015293: symporter activity | 3.91E-02 |
| 72 | GO:0051287: NAD binding | 4.12E-02 |
| 73 | GO:0005509: calcium ion binding | 4.19E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 2 | GO:0009543: chloroplast thylakoid lumen | 4.86E-08 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 3.52E-07 |
| 4 | GO:0048046: apoplast | 6.11E-07 |
| 5 | GO:0009579: thylakoid | 6.40E-07 |
| 6 | GO:0031977: thylakoid lumen | 1.86E-06 |
| 7 | GO:0005618: cell wall | 3.39E-05 |
| 8 | GO:0009507: chloroplast | 5.50E-05 |
| 9 | GO:0031225: anchored component of membrane | 1.14E-04 |
| 10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.87E-04 |
| 11 | GO:0009570: chloroplast stroma | 2.20E-04 |
| 12 | GO:0042170: plastid membrane | 3.73E-04 |
| 13 | GO:0046658: anchored component of plasma membrane | 6.07E-04 |
| 14 | GO:0009654: photosystem II oxygen evolving complex | 6.90E-04 |
| 15 | GO:0009941: chloroplast envelope | 8.13E-04 |
| 16 | GO:0032432: actin filament bundle | 8.73E-04 |
| 17 | GO:0019898: extrinsic component of membrane | 1.40E-03 |
| 18 | GO:0009534: chloroplast thylakoid | 1.44E-03 |
| 19 | GO:0009505: plant-type cell wall | 1.45E-03 |
| 20 | GO:0042807: central vacuole | 2.55E-03 |
| 21 | GO:0005576: extracellular region | 3.10E-03 |
| 22 | GO:0005886: plasma membrane | 3.18E-03 |
| 23 | GO:0000326: protein storage vacuole | 3.37E-03 |
| 24 | GO:0008180: COP9 signalosome | 3.81E-03 |
| 25 | GO:0009506: plasmodesma | 4.66E-03 |
| 26 | GO:0055028: cortical microtubule | 4.75E-03 |
| 27 | GO:0005884: actin filament | 5.25E-03 |
| 28 | GO:0032040: small-subunit processome | 5.77E-03 |
| 29 | GO:0016020: membrane | 6.12E-03 |
| 30 | GO:0031012: extracellular matrix | 6.30E-03 |
| 31 | GO:0030095: chloroplast photosystem II | 6.85E-03 |
| 32 | GO:0005770: late endosome | 1.39E-02 |
| 33 | GO:0005778: peroxisomal membrane | 1.94E-02 |
| 34 | GO:0010319: stromule | 1.94E-02 |
| 35 | GO:0005667: transcription factor complex | 2.27E-02 |
| 36 | GO:0005789: endoplasmic reticulum membrane | 2.50E-02 |
| 37 | GO:0019005: SCF ubiquitin ligase complex | 2.54E-02 |
| 38 | GO:0031969: chloroplast membrane | 2.89E-02 |
| 39 | GO:0000502: proteasome complex | 4.45E-02 |
| 40 | GO:0005840: ribosome | 4.89E-02 |