Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G01550

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0051928: positive regulation of calcium ion transport0.00E+00
2GO:0015833: peptide transport0.00E+00
3GO:0006105: succinate metabolic process0.00E+00
4GO:0019484: beta-alanine catabolic process0.00E+00
5GO:0006725: cellular aromatic compound metabolic process0.00E+00
6GO:0071578: zinc II ion transmembrane import0.00E+00
7GO:0048227: plasma membrane to endosome transport0.00E+00
8GO:0010398: xylogalacturonan metabolic process0.00E+00
9GO:0010241: ent-kaurene oxidation to kaurenoic acid0.00E+00
10GO:0009448: gamma-aminobutyric acid metabolic process0.00E+00
11GO:0052544: defense response by callose deposition in cell wall1.77E-05
12GO:0042594: response to starvation3.53E-05
13GO:0007292: female gamete generation2.22E-04
14GO:1990641: response to iron ion starvation2.22E-04
15GO:1903409: reactive oxygen species biosynthetic process2.22E-04
16GO:0000349: generation of catalytic spliceosome for first transesterification step2.22E-04
17GO:0009865: pollen tube adhesion2.22E-04
18GO:0035344: hypoxanthine transport2.22E-04
19GO:0071366: cellular response to indolebutyric acid stimulus2.22E-04
20GO:0046520: sphingoid biosynthetic process2.22E-04
21GO:0006540: glutamate decarboxylation to succinate2.22E-04
22GO:0035494: SNARE complex disassembly2.22E-04
23GO:0098721: uracil import across plasma membrane2.22E-04
24GO:0098702: adenine import across plasma membrane2.22E-04
25GO:0035266: meristem growth2.22E-04
26GO:0098710: guanine import across plasma membrane2.22E-04
27GO:0009450: gamma-aminobutyric acid catabolic process2.22E-04
28GO:0006914: autophagy2.85E-04
29GO:0006535: cysteine biosynthetic process from serine4.05E-04
30GO:0009641: shade avoidance4.05E-04
31GO:0032509: endosome transport via multivesicular body sorting pathway4.95E-04
32GO:0010033: response to organic substance4.95E-04
33GO:0009727: detection of ethylene stimulus4.95E-04
34GO:0006101: citrate metabolic process4.95E-04
35GO:0006212: uracil catabolic process4.95E-04
36GO:0019483: beta-alanine biosynthetic process4.95E-04
37GO:0015865: purine nucleotide transport4.95E-04
38GO:0051788: response to misfolded protein4.95E-04
39GO:0042939: tripeptide transport4.95E-04
40GO:1900459: positive regulation of brassinosteroid mediated signaling pathway4.95E-04
41GO:0052542: defense response by callose deposition4.95E-04
42GO:0019441: tryptophan catabolic process to kynurenine4.95E-04
43GO:0009308: amine metabolic process4.95E-04
44GO:0009257: 10-formyltetrahydrofolate biosynthetic process4.95E-04
45GO:0042742: defense response to bacterium6.11E-04
46GO:0010043: response to zinc ion6.11E-04
47GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway8.05E-04
48GO:0060968: regulation of gene silencing8.05E-04
49GO:0042344: indole glucosinolate catabolic process8.05E-04
50GO:0006954: inflammatory response8.05E-04
51GO:1900140: regulation of seedling development8.05E-04
52GO:0090630: activation of GTPase activity8.05E-04
53GO:0000162: tryptophan biosynthetic process8.53E-04
54GO:0019344: cysteine biosynthetic process9.41E-04
55GO:2001289: lipid X metabolic process1.15E-03
56GO:0070301: cellular response to hydrogen peroxide1.15E-03
57GO:0046902: regulation of mitochondrial membrane permeability1.15E-03
58GO:0072334: UDP-galactose transmembrane transport1.15E-03
59GO:0009113: purine nucleobase biosynthetic process1.15E-03
60GO:0006809: nitric oxide biosynthetic process1.15E-03
61GO:0009963: positive regulation of flavonoid biosynthetic process1.15E-03
62GO:0006882: cellular zinc ion homeostasis1.15E-03
63GO:0000578: embryonic axis specification1.15E-03
64GO:0006624: vacuolar protein processing1.15E-03
65GO:0006020: inositol metabolic process1.15E-03
66GO:0048830: adventitious root development1.53E-03
67GO:0006536: glutamate metabolic process1.53E-03
68GO:0061088: regulation of sequestering of zinc ion1.53E-03
69GO:0010508: positive regulation of autophagy1.53E-03
70GO:0006878: cellular copper ion homeostasis1.53E-03
71GO:0042938: dipeptide transport1.53E-03
72GO:0010222: stem vascular tissue pattern formation1.53E-03
73GO:0010182: sugar mediated signaling pathway1.84E-03
74GO:0048544: recognition of pollen1.97E-03
75GO:0006623: protein targeting to vacuole2.12E-03
76GO:0016192: vesicle-mediated transport2.19E-03
77GO:0048232: male gamete generation2.40E-03
78GO:0043248: proteasome assembly2.40E-03
79GO:0042732: D-xylose metabolic process2.40E-03
80GO:0010337: regulation of salicylic acid metabolic process2.40E-03
81GO:0050665: hydrogen peroxide biosynthetic process2.40E-03
82GO:0009759: indole glucosinolate biosynthetic process2.40E-03
83GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly2.40E-03
84GO:0015691: cadmium ion transport2.40E-03
85GO:0048827: phyllome development2.40E-03
86GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation2.40E-03
87GO:0007264: small GTPase mediated signal transduction2.42E-03
88GO:0071281: cellular response to iron ion2.57E-03
89GO:0006694: steroid biosynthetic process2.89E-03
90GO:0048280: vesicle fusion with Golgi apparatus2.89E-03
91GO:0001666: response to hypoxia3.26E-03
92GO:0006955: immune response3.40E-03
93GO:0009395: phospholipid catabolic process3.40E-03
94GO:0070370: cellular heat acclimation3.40E-03
95GO:0006614: SRP-dependent cotranslational protein targeting to membrane3.40E-03
96GO:0071669: plant-type cell wall organization or biogenesis3.40E-03
97GO:0006333: chromatin assembly or disassembly3.40E-03
98GO:0009396: folic acid-containing compound biosynthetic process3.40E-03
99GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process3.40E-03
100GO:0010044: response to aluminum ion3.40E-03
101GO:0015031: protein transport3.51E-03
102GO:0009061: anaerobic respiration3.94E-03
103GO:0009690: cytokinin metabolic process3.94E-03
104GO:0006605: protein targeting3.94E-03
105GO:0010078: maintenance of root meristem identity3.94E-03
106GO:0006102: isocitrate metabolic process3.94E-03
107GO:0016559: peroxisome fission3.94E-03
108GO:0010150: leaf senescence4.26E-03
109GO:0010311: lateral root formation4.46E-03
110GO:0048767: root hair elongation4.46E-03
111GO:0043562: cellular response to nitrogen levels4.51E-03
112GO:0009808: lignin metabolic process4.51E-03
113GO:0006499: N-terminal protein myristoylation4.68E-03
114GO:0006098: pentose-phosphate shunt5.11E-03
115GO:0045087: innate immune response5.38E-03
116GO:0006099: tricarboxylic acid cycle5.62E-03
117GO:0035999: tetrahydrofolate interconversion5.74E-03
118GO:0008202: steroid metabolic process5.74E-03
119GO:0009970: cellular response to sulfate starvation6.38E-03
120GO:0006896: Golgi to vacuole transport6.38E-03
121GO:0048829: root cap development6.38E-03
122GO:0009640: photomorphogenesis6.93E-03
123GO:0010015: root morphogenesis7.06E-03
124GO:0043085: positive regulation of catalytic activity7.06E-03
125GO:0009682: induced systemic resistance7.06E-03
126GO:0006378: mRNA polyadenylation7.06E-03
127GO:0009684: indoleacetic acid biosynthetic process7.06E-03
128GO:0010105: negative regulation of ethylene-activated signaling pathway7.76E-03
129GO:0071365: cellular response to auxin stimulus7.76E-03
130GO:0009723: response to ethylene8.94E-03
131GO:0034605: cellular response to heat9.23E-03
132GO:0006541: glutamine metabolic process9.23E-03
133GO:0007034: vacuolar transport9.23E-03
134GO:0002237: response to molecule of bacterial origin9.23E-03
135GO:0009933: meristem structural organization9.23E-03
136GO:0007031: peroxisome organization1.00E-02
137GO:0005985: sucrose metabolic process1.00E-02
138GO:0090351: seedling development1.00E-02
139GO:0010053: root epidermal cell differentiation1.00E-02
140GO:0034976: response to endoplasmic reticulum stress1.08E-02
141GO:0048367: shoot system development1.14E-02
142GO:0007010: cytoskeleton organization1.16E-02
143GO:0016575: histone deacetylation1.24E-02
144GO:0009742: brassinosteroid mediated signaling pathway1.42E-02
145GO:0030433: ubiquitin-dependent ERAD pathway1.42E-02
146GO:0031348: negative regulation of defense response1.42E-02
147GO:0009686: gibberellin biosynthetic process1.51E-02
148GO:0040007: growth1.51E-02
149GO:0001944: vasculature development1.51E-02
150GO:0009625: response to insect1.51E-02
151GO:0010227: floral organ abscission1.51E-02
152GO:0048364: root development1.69E-02
153GO:0051028: mRNA transport1.70E-02
154GO:0042147: retrograde transport, endosome to Golgi1.70E-02
155GO:0000271: polysaccharide biosynthetic process1.79E-02
156GO:0008360: regulation of cell shape1.89E-02
157GO:0045489: pectin biosynthetic process1.89E-02
158GO:0010154: fruit development1.89E-02
159GO:0061025: membrane fusion1.99E-02
160GO:0010183: pollen tube guidance2.09E-02
161GO:0006468: protein phosphorylation2.10E-02
162GO:0006891: intra-Golgi vesicle-mediated transport2.19E-02
163GO:0006635: fatty acid beta-oxidation2.19E-02
164GO:0009651: response to salt stress2.30E-02
165GO:0009630: gravitropism2.30E-02
166GO:0010252: auxin homeostasis2.52E-02
167GO:0071805: potassium ion transmembrane transport2.63E-02
168GO:0010468: regulation of gene expression2.76E-02
169GO:0016126: sterol biosynthetic process2.85E-02
170GO:0009733: response to auxin2.99E-02
171GO:0009627: systemic acquired resistance3.09E-02
172GO:0006888: ER to Golgi vesicle-mediated transport3.20E-02
173GO:0006950: response to stress3.20E-02
174GO:0055114: oxidation-reduction process3.37E-02
175GO:0009826: unidimensional cell growth3.45E-02
176GO:0009817: defense response to fungus, incompatible interaction3.45E-02
177GO:0030244: cellulose biosynthetic process3.45E-02
178GO:0008219: cell death3.45E-02
179GO:0009832: plant-type cell wall biogenesis3.57E-02
180GO:0006811: ion transport3.70E-02
181GO:0010119: regulation of stomatal movement3.82E-02
182GO:0009409: response to cold3.93E-02
183GO:0006865: amino acid transport3.95E-02
184GO:0006839: mitochondrial transport4.47E-02
185GO:0046686: response to cadmium ion4.80E-02
186GO:0051707: response to other organism4.88E-02
187GO:0010114: response to red light4.88E-02
RankGO TermAdjusted P value
1GO:0047205: quinate O-hydroxycinnamoyltransferase activity0.00E+00
2GO:0047172: shikimate O-hydroxycinnamoyltransferase activity0.00E+00
3GO:0019211: phosphatase activator activity0.00E+00
4GO:0009045: xylose isomerase activity0.00E+00
5GO:0017113: dihydropyrimidine dehydrogenase (NADP+) activity0.00E+00
6GO:0016701: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen0.00E+00
7GO:0052616: ent-kaur-16-en-19-ol oxidase activity0.00E+00
8GO:0052615: ent-kaurene oxidase activity0.00E+00
9GO:0015197: peptide transporter activity0.00E+00
10GO:0034387: 4-aminobutyrate:pyruvate transaminase activity0.00E+00
11GO:0015334: high-affinity oligopeptide transporter activity0.00E+00
12GO:0052617: ent-kaur-16-en-19-al oxidase activity0.00E+00
13GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
14GO:0000170: sphingosine hydroxylase activity2.22E-04
15GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity2.22E-04
16GO:0001530: lipopolysaccharide binding2.22E-04
17GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity2.22E-04
18GO:0015208: guanine transmembrane transporter activity2.22E-04
19GO:0052595: aliphatic-amine oxidase activity2.22E-04
20GO:0004112: cyclic-nucleotide phosphodiesterase activity2.22E-04
21GO:0015294: solute:cation symporter activity2.22E-04
22GO:0003867: 4-aminobutyrate transaminase activity2.22E-04
23GO:0015207: adenine transmembrane transporter activity2.22E-04
24GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity2.22E-04
25GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity2.22E-04
26GO:0003994: aconitate hydratase activity4.95E-04
27GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity4.95E-04
28GO:0004477: methenyltetrahydrofolate cyclohydrolase activity4.95E-04
29GO:0038199: ethylene receptor activity4.95E-04
30GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity4.95E-04
31GO:0042284: sphingolipid delta-4 desaturase activity4.95E-04
32GO:0004061: arylformamidase activity4.95E-04
33GO:0004329: formate-tetrahydrofolate ligase activity4.95E-04
34GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding4.95E-04
35GO:0042937: tripeptide transporter activity4.95E-04
36GO:0047209: coniferyl-alcohol glucosyltransferase activity4.95E-04
37GO:0004566: beta-glucuronidase activity4.95E-04
38GO:0050897: cobalt ion binding6.11E-04
39GO:0005047: signal recognition particle binding8.05E-04
40GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity8.05E-04
41GO:0003955: NAD(P)H dehydrogenase (quinone) activity8.05E-04
42GO:0016595: glutamate binding8.05E-04
43GO:0005483: soluble NSF attachment protein activity8.05E-04
44GO:0005093: Rab GDP-dissociation inhibitor activity8.05E-04
45GO:0016301: kinase activity1.15E-03
46GO:0009001: serine O-acetyltransferase activity1.15E-03
47GO:0048027: mRNA 5'-UTR binding1.15E-03
48GO:0015086: cadmium ion transmembrane transporter activity1.15E-03
49GO:0004108: citrate (Si)-synthase activity1.15E-03
50GO:0030527: structural constituent of chromatin1.15E-03
51GO:0051740: ethylene binding1.15E-03
52GO:0004737: pyruvate decarboxylase activity1.53E-03
53GO:0042936: dipeptide transporter activity1.53E-03
54GO:0019905: syntaxin binding1.53E-03
55GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.53E-03
56GO:0015210: uracil transmembrane transporter activity1.53E-03
57GO:0016004: phospholipase activator activity1.53E-03
58GO:0004834: tryptophan synthase activity1.53E-03
59GO:0005459: UDP-galactose transmembrane transporter activity1.95E-03
60GO:0008198: ferrous iron binding1.95E-03
61GO:0005471: ATP:ADP antiporter activity1.95E-03
62GO:0002020: protease binding1.95E-03
63GO:0015562: efflux transmembrane transporter activity2.40E-03
64GO:0035252: UDP-xylosyltransferase activity2.40E-03
65GO:0036402: proteasome-activating ATPase activity2.40E-03
66GO:0030976: thiamine pyrophosphate binding2.40E-03
67GO:0004124: cysteine synthase activity2.89E-03
68GO:0051753: mannan synthase activity2.89E-03
69GO:0016831: carboxy-lyase activity3.40E-03
70GO:0004525: ribonuclease III activity3.94E-03
71GO:0005096: GTPase activator activity4.46E-03
72GO:0008142: oxysterol binding4.51E-03
73GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)4.51E-03
74GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors5.11E-03
75GO:0000989: transcription factor activity, transcription factor binding5.11E-03
76GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity5.11E-03
77GO:0004743: pyruvate kinase activity5.74E-03
78GO:0045309: protein phosphorylated amino acid binding5.74E-03
79GO:0030955: potassium ion binding5.74E-03
80GO:0042626: ATPase activity, coupled to transmembrane movement of substances5.78E-03
81GO:0004713: protein tyrosine kinase activity6.38E-03
82GO:0004673: protein histidine kinase activity6.38E-03
83GO:0005524: ATP binding6.57E-03
84GO:0019904: protein domain specific binding7.06E-03
85GO:0005506: iron ion binding7.40E-03
86GO:0000976: transcription regulatory region sequence-specific DNA binding7.76E-03
87GO:0008081: phosphoric diester hydrolase activity8.48E-03
88GO:0000155: phosphorelay sensor kinase activity8.48E-03
89GO:0004175: endopeptidase activity9.23E-03
90GO:0008131: primary amine oxidase activity9.23E-03
91GO:0017025: TBP-class protein binding1.00E-02
92GO:0005385: zinc ion transmembrane transporter activity1.16E-02
93GO:0004407: histone deacetylase activity1.16E-02
94GO:0043424: protein histidine kinase binding1.24E-02
95GO:0015079: potassium ion transmembrane transporter activity1.24E-02
96GO:0008324: cation transmembrane transporter activity1.24E-02
97GO:0004707: MAP kinase activity1.33E-02
98GO:0019706: protein-cysteine S-palmitoyltransferase activity1.33E-02
99GO:0030246: carbohydrate binding1.37E-02
100GO:0005507: copper ion binding1.49E-02
101GO:0016760: cellulose synthase (UDP-forming) activity1.51E-02
102GO:0003756: protein disulfide isomerase activity1.60E-02
103GO:0030170: pyridoxal phosphate binding1.86E-02
104GO:0030276: clathrin binding1.89E-02
105GO:0010181: FMN binding1.99E-02
106GO:0004872: receptor activity2.09E-02
107GO:0048038: quinone binding2.19E-02
108GO:0004197: cysteine-type endopeptidase activity2.30E-02
109GO:0000156: phosphorelay response regulator activity2.41E-02
110GO:0016759: cellulose synthase activity2.52E-02
111GO:0008237: metallopeptidase activity2.63E-02
112GO:0005200: structural constituent of cytoskeleton2.63E-02
113GO:0051213: dioxygenase activity2.85E-02
114GO:0005215: transporter activity2.93E-02
115GO:0042802: identical protein binding2.94E-02
116GO:0004806: triglyceride lipase activity3.20E-02
117GO:0000287: magnesium ion binding3.51E-02
118GO:0004222: metalloendopeptidase activity3.70E-02
119GO:0008270: zinc ion binding3.89E-02
120GO:0003993: acid phosphatase activity4.21E-02
121GO:0000149: SNARE binding4.34E-02
122GO:0004672: protein kinase activity4.41E-02
123GO:0051539: 4 iron, 4 sulfur cluster binding4.47E-02
124GO:0004674: protein serine/threonine kinase activity4.64E-02
125GO:0005484: SNAP receptor activity4.88E-02
126GO:0020037: heme binding4.89E-02
RankGO TermAdjusted P value
1GO:0005785: signal recognition particle receptor complex0.00E+00
2GO:0016021: integral component of membrane6.16E-07
3GO:0005774: vacuolar membrane4.98E-06
4GO:0005794: Golgi apparatus7.82E-06
5GO:0005886: plasma membrane1.04E-05
6GO:0000323: lytic vacuole1.93E-05
7GO:0005783: endoplasmic reticulum3.50E-05
8GO:0030173: integral component of Golgi membrane1.15E-04
9GO:0005773: vacuole1.47E-04
10GO:0034045: pre-autophagosomal structure membrane2.40E-04
11GO:0005802: trans-Golgi network3.59E-04
12GO:0005849: mRNA cleavage factor complex1.15E-03
13GO:0071006: U2-type catalytic step 1 spliceosome1.15E-03
14GO:0005776: autophagosome1.53E-03
15GO:0010008: endosome membrane1.75E-03
16GO:0005768: endosome1.77E-03
17GO:0005770: late endosome1.84E-03
18GO:0030140: trans-Golgi network transport vesicle2.40E-03
19GO:0000974: Prp19 complex2.40E-03
20GO:0009506: plasmodesma2.88E-03
21GO:0031597: cytosolic proteasome complex2.89E-03
22GO:0031595: nuclear proteasome complex3.40E-03
23GO:0012507: ER to Golgi transport vesicle membrane3.94E-03
24GO:0005779: integral component of peroxisomal membrane4.51E-03
25GO:0005786: signal recognition particle, endoplasmic reticulum targeting4.51E-03
26GO:0000325: plant-type vacuole4.91E-03
27GO:0005789: endoplasmic reticulum membrane5.04E-03
28GO:0008540: proteasome regulatory particle, base subcomplex5.74E-03
29GO:0031201: SNARE complex6.39E-03
30GO:0005765: lysosomal membrane7.06E-03
31GO:0005884: actin filament7.06E-03
32GO:0030176: integral component of endoplasmic reticulum membrane1.00E-02
33GO:0005777: peroxisome1.08E-02
34GO:0031410: cytoplasmic vesicle1.42E-02
35GO:0016020: membrane1.46E-02
36GO:0030136: clathrin-coated vesicle1.70E-02
37GO:0000785: chromatin2.30E-02
38GO:0009705: plant-type vacuole membrane2.31E-02
39GO:0005615: extracellular space2.59E-02
40GO:0005778: peroxisomal membrane2.63E-02
41GO:0009707: chloroplast outer membrane3.45E-02
42GO:0005829: cytosol3.67E-02
43GO:0005737: cytoplasm3.91E-02
44GO:0080008: Cul4-RING E3 ubiquitin ligase complex3.92E-02
45GO:0000786: nucleosome3.95E-02
46GO:0031902: late endosome membrane4.61E-02
Gene type



Gene DE type