GO Enrichment Analysis of Co-expressed Genes with
AT1G01540
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901485: positive regulation of transcription factor catabolic process | 0.00E+00 |
| 2 | GO:0051503: adenine nucleotide transport | 0.00E+00 |
| 3 | GO:0010583: response to cyclopentenone | 3.50E-05 |
| 4 | GO:0045010: actin nucleation | 4.50E-05 |
| 5 | GO:0048587: regulation of short-day photoperiodism, flowering | 2.04E-04 |
| 6 | GO:0006695: cholesterol biosynthetic process | 2.04E-04 |
| 7 | GO:0006650: glycerophospholipid metabolic process | 2.04E-04 |
| 8 | GO:1900111: positive regulation of histone H3-K9 dimethylation | 2.04E-04 |
| 9 | GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway | 3.42E-04 |
| 10 | GO:0032922: circadian regulation of gene expression | 3.42E-04 |
| 11 | GO:0000271: polysaccharide biosynthetic process | 4.86E-04 |
| 12 | GO:0032456: endocytic recycling | 4.92E-04 |
| 13 | GO:0046902: regulation of mitochondrial membrane permeability | 4.92E-04 |
| 14 | GO:0051016: barbed-end actin filament capping | 4.92E-04 |
| 15 | GO:0009855: determination of bilateral symmetry | 4.92E-04 |
| 16 | GO:0045489: pectin biosynthetic process | 5.23E-04 |
| 17 | GO:0016126: sterol biosynthetic process | 9.13E-04 |
| 18 | GO:1900425: negative regulation of defense response to bacterium | 1.01E-03 |
| 19 | GO:2000067: regulation of root morphogenesis | 1.20E-03 |
| 20 | GO:0009955: adaxial/abaxial pattern specification | 1.20E-03 |
| 21 | GO:0080060: integument development | 1.20E-03 |
| 22 | GO:0010014: meristem initiation | 1.20E-03 |
| 23 | GO:0010555: response to mannitol | 1.20E-03 |
| 24 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.20E-03 |
| 25 | GO:0051510: regulation of unidimensional cell growth | 1.41E-03 |
| 26 | GO:0016051: carbohydrate biosynthetic process | 1.48E-03 |
| 27 | GO:0007155: cell adhesion | 1.63E-03 |
| 28 | GO:0009690: cytokinin metabolic process | 1.63E-03 |
| 29 | GO:0052543: callose deposition in cell wall | 1.63E-03 |
| 30 | GO:0009932: cell tip growth | 1.86E-03 |
| 31 | GO:0007186: G-protein coupled receptor signaling pathway | 1.86E-03 |
| 32 | GO:0042546: cell wall biogenesis | 1.97E-03 |
| 33 | GO:0045337: farnesyl diphosphate biosynthetic process | 2.10E-03 |
| 34 | GO:0033384: geranyl diphosphate biosynthetic process | 2.10E-03 |
| 35 | GO:0000902: cell morphogenesis | 2.10E-03 |
| 36 | GO:0016573: histone acetylation | 2.35E-03 |
| 37 | GO:0006535: cysteine biosynthetic process from serine | 2.61E-03 |
| 38 | GO:0000038: very long-chain fatty acid metabolic process | 2.87E-03 |
| 39 | GO:0010072: primary shoot apical meristem specification | 2.87E-03 |
| 40 | GO:0009750: response to fructose | 2.87E-03 |
| 41 | GO:0006790: sulfur compound metabolic process | 3.15E-03 |
| 42 | GO:0030036: actin cytoskeleton organization | 3.43E-03 |
| 43 | GO:0071555: cell wall organization | 3.43E-03 |
| 44 | GO:0009742: brassinosteroid mediated signaling pathway | 3.81E-03 |
| 45 | GO:0010167: response to nitrate | 4.03E-03 |
| 46 | GO:0046854: phosphatidylinositol phosphorylation | 4.03E-03 |
| 47 | GO:0019344: cysteine biosynthetic process | 4.65E-03 |
| 48 | GO:0006338: chromatin remodeling | 4.65E-03 |
| 49 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.65E-03 |
| 50 | GO:0009416: response to light stimulus | 6.22E-03 |
| 51 | GO:0048653: anther development | 7.10E-03 |
| 52 | GO:0000226: microtubule cytoskeleton organization | 7.10E-03 |
| 53 | GO:0042335: cuticle development | 7.10E-03 |
| 54 | GO:0010305: leaf vascular tissue pattern formation | 7.48E-03 |
| 55 | GO:0009741: response to brassinosteroid | 7.48E-03 |
| 56 | GO:0009791: post-embryonic development | 8.26E-03 |
| 57 | GO:0009749: response to glucose | 8.26E-03 |
| 58 | GO:0008654: phospholipid biosynthetic process | 8.26E-03 |
| 59 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 8.66E-03 |
| 60 | GO:0071554: cell wall organization or biogenesis | 8.66E-03 |
| 61 | GO:0007264: small GTPase mediated signal transduction | 9.07E-03 |
| 62 | GO:0032502: developmental process | 9.07E-03 |
| 63 | GO:0010090: trichome morphogenesis | 9.48E-03 |
| 64 | GO:0009860: pollen tube growth | 1.03E-02 |
| 65 | GO:0042128: nitrate assimilation | 1.21E-02 |
| 66 | GO:0009793: embryo development ending in seed dormancy | 1.22E-02 |
| 67 | GO:0006355: regulation of transcription, DNA-templated | 1.23E-02 |
| 68 | GO:0010411: xyloglucan metabolic process | 1.26E-02 |
| 69 | GO:0010119: regulation of stomatal movement | 1.50E-02 |
| 70 | GO:0009637: response to blue light | 1.60E-02 |
| 71 | GO:0030154: cell differentiation | 1.70E-02 |
| 72 | GO:0016042: lipid catabolic process | 1.71E-02 |
| 73 | GO:0006351: transcription, DNA-templated | 1.87E-02 |
| 74 | GO:0009744: response to sucrose | 1.92E-02 |
| 75 | GO:0031347: regulation of defense response | 2.19E-02 |
| 76 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.43E-02 |
| 77 | GO:0009734: auxin-activated signaling pathway | 2.48E-02 |
| 78 | GO:0048316: seed development | 2.73E-02 |
| 79 | GO:0048367: shoot system development | 2.73E-02 |
| 80 | GO:0051726: regulation of cell cycle | 3.17E-02 |
| 81 | GO:0045893: positive regulation of transcription, DNA-templated | 3.58E-02 |
| 82 | GO:0006633: fatty acid biosynthetic process | 4.20E-02 |
| 83 | GO:0040008: regulation of growth | 4.34E-02 |
| 84 | GO:0007623: circadian rhythm | 4.49E-02 |
| 85 | GO:0010228: vegetative to reproductive phase transition of meristem | 4.64E-02 |
| 86 | GO:0006470: protein dephosphorylation | 4.94E-02 |
| 87 | GO:0007166: cell surface receptor signaling pathway | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047889: ferredoxin-nitrate reductase activity | 0.00E+00 |
| 2 | GO:0048307: ferredoxin-nitrite reductase activity | 0.00E+00 |
| 3 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 4 | GO:0050421: nitrite reductase (NO-forming) activity | 0.00E+00 |
| 5 | GO:0003838: sterol 24-C-methyltransferase activity | 8.61E-05 |
| 6 | GO:0050017: L-3-cyanoalanine synthase activity | 2.04E-04 |
| 7 | GO:0031683: G-protein beta/gamma-subunit complex binding | 3.42E-04 |
| 8 | GO:0001664: G-protein coupled receptor binding | 3.42E-04 |
| 9 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 3.51E-04 |
| 10 | GO:0001872: (1->3)-beta-D-glucan binding | 4.92E-04 |
| 11 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 4.92E-04 |
| 12 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 8.18E-04 |
| 13 | GO:0008374: O-acyltransferase activity | 8.29E-04 |
| 14 | GO:0005471: ATP:ADP antiporter activity | 8.29E-04 |
| 15 | GO:0004124: cysteine synthase activity | 1.20E-03 |
| 16 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.20E-03 |
| 17 | GO:0019900: kinase binding | 1.20E-03 |
| 18 | GO:0035064: methylated histone binding | 1.63E-03 |
| 19 | GO:0004337: geranyltranstransferase activity | 2.10E-03 |
| 20 | GO:0004161: dimethylallyltranstransferase activity | 2.87E-03 |
| 21 | GO:0003924: GTPase activity | 3.01E-03 |
| 22 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 4.34E-03 |
| 23 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 4.34E-03 |
| 24 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 4.34E-03 |
| 25 | GO:0016758: transferase activity, transferring hexosyl groups | 4.37E-03 |
| 26 | GO:0008134: transcription factor binding | 4.65E-03 |
| 27 | GO:0051087: chaperone binding | 4.98E-03 |
| 28 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 5.10E-03 |
| 29 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 7.75E-03 |
| 30 | GO:0019901: protein kinase binding | 8.26E-03 |
| 31 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 8.66E-03 |
| 32 | GO:0051015: actin filament binding | 9.48E-03 |
| 33 | GO:0016788: hydrolase activity, acting on ester bonds | 9.75E-03 |
| 34 | GO:0016759: cellulose synthase activity | 9.91E-03 |
| 35 | GO:0005516: calmodulin binding | 1.05E-02 |
| 36 | GO:0016413: O-acetyltransferase activity | 1.08E-02 |
| 37 | GO:0005525: GTP binding | 1.17E-02 |
| 38 | GO:0003677: DNA binding | 1.20E-02 |
| 39 | GO:0030247: polysaccharide binding | 1.26E-02 |
| 40 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.26E-02 |
| 41 | GO:0052689: carboxylic ester hydrolase activity | 1.31E-02 |
| 42 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.45E-02 |
| 43 | GO:0004871: signal transducer activity | 1.49E-02 |
| 44 | GO:0042803: protein homodimerization activity | 1.49E-02 |
| 45 | GO:0044212: transcription regulatory region DNA binding | 1.52E-02 |
| 46 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.76E-02 |
| 47 | GO:0004185: serine-type carboxypeptidase activity | 1.92E-02 |
| 48 | GO:0016757: transferase activity, transferring glycosyl groups | 2.18E-02 |
| 49 | GO:0022857: transmembrane transporter activity | 2.92E-02 |
| 50 | GO:0003779: actin binding | 2.98E-02 |
| 51 | GO:0016746: transferase activity, transferring acyl groups | 3.11E-02 |
| 52 | GO:0046872: metal ion binding | 3.32E-02 |
| 53 | GO:0030170: pyridoxal phosphate binding | 3.85E-02 |
| 54 | GO:0016787: hydrolase activity | 3.95E-02 |
| 55 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.11E-02 |
| 56 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.27E-02 |
| 57 | GO:0005507: copper ion binding | 4.43E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031224: intrinsic component of membrane | 0.00E+00 |
| 2 | GO:0009505: plant-type cell wall | 3.60E-05 |
| 3 | GO:0031519: PcG protein complex | 3.42E-04 |
| 4 | GO:0035619: root hair tip | 4.92E-04 |
| 5 | GO:0031209: SCAR complex | 1.01E-03 |
| 6 | GO:0032588: trans-Golgi network membrane | 1.01E-03 |
| 7 | GO:0009506: plasmodesma | 1.10E-03 |
| 8 | GO:0046658: anchored component of plasma membrane | 1.16E-03 |
| 9 | GO:0000123: histone acetyltransferase complex | 1.41E-03 |
| 10 | GO:0005677: chromatin silencing complex | 1.86E-03 |
| 11 | GO:0031901: early endosome membrane | 2.10E-03 |
| 12 | GO:0031225: anchored component of membrane | 2.31E-03 |
| 13 | GO:0030176: integral component of endoplasmic reticulum membrane | 4.03E-03 |
| 14 | GO:0000139: Golgi membrane | 5.44E-03 |
| 15 | GO:0048046: apoplast | 7.12E-03 |
| 16 | GO:0005618: cell wall | 8.27E-03 |
| 17 | GO:0005773: vacuole | 1.37E-02 |
| 18 | GO:0000786: nucleosome | 1.55E-02 |
| 19 | GO:0005576: extracellular region | 1.62E-02 |
| 20 | GO:0005886: plasma membrane | 1.99E-02 |
| 21 | GO:0005856: cytoskeleton | 2.08E-02 |
| 22 | GO:0005634: nucleus | 2.32E-02 |
| 23 | GO:0005834: heterotrimeric G-protein complex | 2.79E-02 |
| 24 | GO:0005794: Golgi apparatus | 4.30E-02 |
| 25 | GO:0005802: trans-Golgi network | 4.97E-02 |