Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G01340

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
2GO:0072722: response to amitrole0.00E+00
3GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
4GO:0015690: aluminum cation transport0.00E+00
5GO:0070212: protein poly-ADP-ribosylation0.00E+00
6GO:0042430: indole-containing compound metabolic process0.00E+00
7GO:0030149: sphingolipid catabolic process0.00E+00
8GO:0006793: phosphorus metabolic process0.00E+00
9GO:0009617: response to bacterium3.59E-10
10GO:0009626: plant-type hypersensitive response3.76E-05
11GO:0006979: response to oxidative stress5.26E-05
12GO:0006564: L-serine biosynthetic process6.89E-05
13GO:0051707: response to other organism1.44E-04
14GO:0046686: response to cadmium ion2.11E-04
15GO:0009609: response to symbiotic bacterium2.51E-04
16GO:0033306: phytol metabolic process2.51E-04
17GO:0055081: anion homeostasis2.51E-04
18GO:0010193: response to ozone2.76E-04
19GO:0010112: regulation of systemic acquired resistance3.46E-04
20GO:0006468: protein phosphorylation3.64E-04
21GO:0009615: response to virus4.49E-04
22GO:0006032: chitin catabolic process4.80E-04
23GO:0009627: systemic acquired resistance5.18E-04
24GO:0006123: mitochondrial electron transport, cytochrome c to oxygen5.53E-04
25GO:0080151: positive regulation of salicylic acid mediated signaling pathway5.53E-04
26GO:0090057: root radial pattern formation5.53E-04
27GO:0015865: purine nucleotide transport5.53E-04
28GO:0019752: carboxylic acid metabolic process5.53E-04
29GO:0044419: interspecies interaction between organisms5.53E-04
30GO:0031349: positive regulation of defense response5.53E-04
31GO:0051592: response to calcium ion5.53E-04
32GO:0000272: polysaccharide catabolic process5.54E-04
33GO:0010200: response to chitin5.87E-04
34GO:0009407: toxin catabolic process7.14E-04
35GO:0010272: response to silver ion8.99E-04
36GO:0045039: protein import into mitochondrial inner membrane8.99E-04
37GO:0010581: regulation of starch biosynthetic process8.99E-04
38GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway8.99E-04
39GO:0010351: lithium ion transport8.99E-04
40GO:0070588: calcium ion transmembrane transport9.03E-04
41GO:0055085: transmembrane transport1.22E-03
42GO:0048194: Golgi vesicle budding1.28E-03
43GO:0043207: response to external biotic stimulus1.28E-03
44GO:0046902: regulation of mitochondrial membrane permeability1.28E-03
45GO:0006882: cellular zinc ion homeostasis1.28E-03
46GO:0001676: long-chain fatty acid metabolic process1.28E-03
47GO:0006515: misfolded or incompletely synthesized protein catabolic process1.28E-03
48GO:0046836: glycolipid transport1.28E-03
49GO:0009636: response to toxic substance1.34E-03
50GO:0016998: cell wall macromolecule catabolic process1.34E-03
51GO:0045727: positive regulation of translation1.71E-03
52GO:0006536: glutamate metabolic process1.71E-03
53GO:0006621: protein retention in ER lumen1.71E-03
54GO:0051205: protein insertion into membrane1.71E-03
55GO:0034440: lipid oxidation1.71E-03
56GO:1901141: regulation of lignin biosynthetic process1.71E-03
57GO:0009409: response to cold1.73E-03
58GO:0006606: protein import into nucleus2.02E-03
59GO:0006461: protein complex assembly2.19E-03
60GO:0009697: salicylic acid biosynthetic process2.19E-03
61GO:0034052: positive regulation of plant-type hypersensitive response2.19E-03
62GO:0045487: gibberellin catabolic process2.19E-03
63GO:0031365: N-terminal protein amino acid modification2.19E-03
64GO:0009646: response to absence of light2.34E-03
65GO:0080167: response to karrikin2.63E-03
66GO:0009624: response to nematode2.65E-03
67GO:0000302: response to reactive oxygen species2.68E-03
68GO:0060918: auxin transport2.70E-03
69GO:0009117: nucleotide metabolic process2.70E-03
70GO:0009228: thiamine biosynthetic process2.70E-03
71GO:0030163: protein catabolic process3.05E-03
72GO:0042742: defense response to bacterium3.08E-03
73GO:0009611: response to wounding3.11E-03
74GO:0010555: response to mannitol3.24E-03
75GO:0080086: stamen filament development3.24E-03
76GO:2000067: regulation of root morphogenesis3.24E-03
77GO:0071470: cellular response to osmotic stress3.24E-03
78GO:0009094: L-phenylalanine biosynthetic process3.24E-03
79GO:0009610: response to symbiotic fungus3.82E-03
80GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c3.82E-03
81GO:0030026: cellular manganese ion homeostasis3.82E-03
82GO:0006102: isocitrate metabolic process4.44E-03
83GO:0010928: regulation of auxin mediated signaling pathway4.44E-03
84GO:0009787: regulation of abscisic acid-activated signaling pathway4.44E-03
85GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.44E-03
86GO:0050821: protein stabilization4.44E-03
87GO:0031540: regulation of anthocyanin biosynthetic process4.44E-03
88GO:0009651: response to salt stress4.58E-03
89GO:0009737: response to abscisic acid4.66E-03
90GO:0040008: regulation of growth5.00E-03
91GO:0009699: phenylpropanoid biosynthetic process5.08E-03
92GO:0006075: (1->3)-beta-D-glucan biosynthetic process5.08E-03
93GO:0007186: G-protein coupled receptor signaling pathway5.08E-03
94GO:0010262: somatic embryogenesis5.08E-03
95GO:0010120: camalexin biosynthetic process5.08E-03
96GO:0010497: plasmodesmata-mediated intercellular transport5.08E-03
97GO:0043562: cellular response to nitrogen levels5.08E-03
98GO:0006607: NLS-bearing protein import into nucleus5.75E-03
99GO:0046685: response to arsenic-containing substance5.75E-03
100GO:0009051: pentose-phosphate shunt, oxidative branch5.75E-03
101GO:0019432: triglyceride biosynthetic process5.75E-03
102GO:0030042: actin filament depolymerization6.46E-03
103GO:2000280: regulation of root development6.46E-03
104GO:0006099: tricarboxylic acid cycle6.68E-03
105GO:0055062: phosphate ion homeostasis7.20E-03
106GO:0007064: mitotic sister chromatid cohesion7.20E-03
107GO:0009870: defense response signaling pathway, resistance gene-dependent7.20E-03
108GO:0043069: negative regulation of programmed cell death7.20E-03
109GO:0006816: calcium ion transport7.96E-03
110GO:0006913: nucleocytoplasmic transport7.96E-03
111GO:0009682: induced systemic resistance7.96E-03
112GO:0015770: sucrose transport7.96E-03
113GO:0009750: response to fructose7.96E-03
114GO:0016485: protein processing7.96E-03
115GO:0048229: gametophyte development7.96E-03
116GO:0006820: anion transport8.75E-03
117GO:0015706: nitrate transport8.75E-03
118GO:0006890: retrograde vesicle-mediated transport, Golgi to ER8.75E-03
119GO:0006006: glucose metabolic process9.57E-03
120GO:2000028: regulation of photoperiodism, flowering9.57E-03
121GO:0006855: drug transmembrane transport9.62E-03
122GO:0002237: response to molecule of bacterial origin1.04E-02
123GO:0042343: indole glucosinolate metabolic process1.13E-02
124GO:0046688: response to copper ion1.13E-02
125GO:0010167: response to nitrate1.13E-02
126GO:0009901: anther dehiscence1.13E-02
127GO:0010224: response to UV-B1.15E-02
128GO:0000162: tryptophan biosynthetic process1.22E-02
129GO:0000027: ribosomal large subunit assembly1.31E-02
130GO:0080147: root hair cell development1.31E-02
131GO:0009863: salicylic acid mediated signaling pathway1.31E-02
132GO:0006825: copper ion transport1.41E-02
133GO:0006874: cellular calcium ion homeostasis1.41E-02
134GO:0009695: jasmonic acid biosynthetic process1.41E-02
135GO:0006952: defense response1.47E-02
136GO:0098542: defense response to other organism1.50E-02
137GO:0031408: oxylipin biosynthetic process1.50E-02
138GO:0009814: defense response, incompatible interaction1.60E-02
139GO:0016226: iron-sulfur cluster assembly1.60E-02
140GO:0035428: hexose transmembrane transport1.60E-02
141GO:0007005: mitochondrion organization1.60E-02
142GO:0031348: negative regulation of defense response1.60E-02
143GO:0009686: gibberellin biosynthetic process1.71E-02
144GO:0009411: response to UV1.71E-02
145GO:0040007: growth1.71E-02
146GO:0009625: response to insect1.71E-02
147GO:0006511: ubiquitin-dependent protein catabolic process1.80E-02
148GO:0009561: megagametogenesis1.81E-02
149GO:0070417: cellular response to cold1.92E-02
150GO:0006810: transport1.99E-02
151GO:0009408: response to heat1.99E-02
152GO:0048653: anther development2.02E-02
153GO:0042631: cellular response to water deprivation2.02E-02
154GO:0046323: glucose import2.14E-02
155GO:0008360: regulation of cell shape2.14E-02
156GO:0009958: positive gravitropism2.14E-02
157GO:0006520: cellular amino acid metabolic process2.14E-02
158GO:0010197: polar nucleus fusion2.14E-02
159GO:0048544: recognition of pollen2.25E-02
160GO:0008152: metabolic process2.25E-02
161GO:0006814: sodium ion transport2.25E-02
162GO:0010183: pollen tube guidance2.36E-02
163GO:0009749: response to glucose2.36E-02
164GO:0002229: defense response to oomycetes2.48E-02
165GO:0006635: fatty acid beta-oxidation2.48E-02
166GO:0050832: defense response to fungus2.53E-02
167GO:0032502: developmental process2.60E-02
168GO:0006508: proteolysis2.70E-02
169GO:0010150: leaf senescence2.75E-02
170GO:0009639: response to red or far red light2.85E-02
171GO:0055114: oxidation-reduction process2.93E-02
172GO:0009734: auxin-activated signaling pathway3.06E-02
173GO:0001666: response to hypoxia3.23E-02
174GO:0009816: defense response to bacterium, incompatible interaction3.36E-02
175GO:0042128: nitrate assimilation3.49E-02
176GO:0016049: cell growth3.76E-02
177GO:0008219: cell death3.90E-02
178GO:0009555: pollen development4.07E-02
179GO:0006811: ion transport4.18E-02
180GO:0010043: response to zinc ion4.32E-02
181GO:0048527: lateral root development4.32E-02
182GO:0010119: regulation of stomatal movement4.32E-02
183GO:0045087: innate immune response4.61E-02
184GO:0009723: response to ethylene4.89E-02
RankGO TermAdjusted P value
1GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
2GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
3GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
4GO:0005046: KDEL sequence binding0.00E+00
5GO:0005524: ATP binding9.86E-07
6GO:0004617: phosphoglycerate dehydrogenase activity2.91E-06
7GO:0051287: NAD binding1.68E-05
8GO:0005388: calcium-transporting ATPase activity3.64E-05
9GO:0047631: ADP-ribose diphosphatase activity6.89E-05
10GO:0000210: NAD+ diphosphatase activity1.01E-04
11GO:0004674: protein serine/threonine kinase activity2.13E-04
12GO:0080042: ADP-glucose pyrophosphohydrolase activity2.51E-04
13GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity2.51E-04
14GO:0004048: anthranilate phosphoribosyltransferase activity2.51E-04
15GO:0008237: metallopeptidase activity3.86E-04
16GO:0016597: amino acid binding4.17E-04
17GO:0005516: calmodulin binding4.63E-04
18GO:0004568: chitinase activity4.80E-04
19GO:0045543: gibberellin 2-beta-dioxygenase activity5.53E-04
20GO:0080041: ADP-ribose pyrophosphohydrolase activity5.53E-04
21GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity5.53E-04
22GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity5.53E-04
23GO:0017110: nucleoside-diphosphatase activity5.53E-04
24GO:0004775: succinate-CoA ligase (ADP-forming) activity5.53E-04
25GO:0019172: glyoxalase III activity5.53E-04
26GO:0070361: mitochondrial light strand promoter anti-sense binding5.53E-04
27GO:0004338: glucan exo-1,3-beta-glucosidase activity5.53E-04
28GO:0004385: guanylate kinase activity5.53E-04
29GO:0048531: beta-1,3-galactosyltransferase activity5.53E-04
30GO:0004776: succinate-CoA ligase (GDP-forming) activity5.53E-04
31GO:0004634: phosphopyruvate hydratase activity5.53E-04
32GO:0001664: G-protein coupled receptor binding8.99E-04
33GO:0016531: copper chaperone activity8.99E-04
34GO:0004148: dihydrolipoyl dehydrogenase activity8.99E-04
35GO:0031683: G-protein beta/gamma-subunit complex binding8.99E-04
36GO:0016165: linoleate 13S-lipoxygenase activity8.99E-04
37GO:0008061: chitin binding9.03E-04
38GO:0004190: aspartic-type endopeptidase activity9.03E-04
39GO:0004364: glutathione transferase activity1.11E-03
40GO:0004351: glutamate decarboxylase activity1.28E-03
41GO:0017089: glycolipid transporter activity1.28E-03
42GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity1.28E-03
43GO:0035529: NADH pyrophosphatase activity1.28E-03
44GO:0004449: isocitrate dehydrogenase (NAD+) activity1.28E-03
45GO:0010178: IAA-amino acid conjugate hydrolase activity1.28E-03
46GO:0004298: threonine-type endopeptidase activity1.34E-03
47GO:0005507: copper ion binding1.53E-03
48GO:0047769: arogenate dehydratase activity1.71E-03
49GO:0004345: glucose-6-phosphate dehydrogenase activity1.71E-03
50GO:0004664: prephenate dehydratase activity1.71E-03
51GO:0051861: glycolipid binding1.71E-03
52GO:0015369: calcium:proton antiporter activity1.71E-03
53GO:0046923: ER retention sequence binding1.71E-03
54GO:0015368: calcium:cation antiporter activity1.71E-03
55GO:0016301: kinase activity2.11E-03
56GO:0015145: monosaccharide transmembrane transporter activity2.19E-03
57GO:0005471: ATP:ADP antiporter activity2.19E-03
58GO:0008233: peptidase activity2.56E-03
59GO:0030976: thiamine pyrophosphate binding2.70E-03
60GO:0004029: aldehyde dehydrogenase (NAD) activity2.70E-03
61GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity2.70E-03
62GO:0102391: decanoate--CoA ligase activity3.24E-03
63GO:0004012: phospholipid-translocating ATPase activity3.24E-03
64GO:0004144: diacylglycerol O-acyltransferase activity3.24E-03
65GO:0004656: procollagen-proline 4-dioxygenase activity3.24E-03
66GO:0005215: transporter activity3.76E-03
67GO:0016831: carboxy-lyase activity3.82E-03
68GO:0008506: sucrose:proton symporter activity3.82E-03
69GO:0008235: metalloexopeptidase activity3.82E-03
70GO:0008121: ubiquinol-cytochrome-c reductase activity3.82E-03
71GO:0004467: long-chain fatty acid-CoA ligase activity3.82E-03
72GO:0008565: protein transporter activity4.42E-03
73GO:0004564: beta-fructofuranosidase activity4.44E-03
74GO:0015288: porin activity4.44E-03
75GO:0015491: cation:cation antiporter activity4.44E-03
76GO:0003843: 1,3-beta-D-glucan synthase activity5.08E-03
77GO:0008308: voltage-gated anion channel activity5.08E-03
78GO:0015238: drug transmembrane transporter activity5.30E-03
79GO:0050897: cobalt ion binding5.83E-03
80GO:0015112: nitrate transmembrane transporter activity6.46E-03
81GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity6.46E-03
82GO:0004575: sucrose alpha-glucosidase activity6.46E-03
83GO:0004672: protein kinase activity6.55E-03
84GO:0042626: ATPase activity, coupled to transmembrane movement of substances7.20E-03
85GO:0015020: glucuronosyltransferase activity7.20E-03
86GO:0004177: aminopeptidase activity7.96E-03
87GO:0008559: xenobiotic-transporting ATPase activity7.96E-03
88GO:0051537: 2 iron, 2 sulfur cluster binding8.92E-03
89GO:0000287: magnesium ion binding9.03E-03
90GO:0005262: calcium channel activity9.57E-03
91GO:0015114: phosphate ion transmembrane transporter activity9.57E-03
92GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism9.57E-03
93GO:0008139: nuclear localization sequence binding9.57E-03
94GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.04E-02
95GO:0003712: transcription cofactor activity1.13E-02
96GO:0016757: transferase activity, transferring glycosyl groups1.27E-02
97GO:0046872: metal ion binding1.41E-02
98GO:0080043: quercetin 3-O-glucosyltransferase activity1.45E-02
99GO:0080044: quercetin 7-O-glucosyltransferase activity1.45E-02
100GO:0004176: ATP-dependent peptidase activity1.50E-02
101GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.69E-02
102GO:0022891: substrate-specific transmembrane transporter activity1.71E-02
103GO:0008810: cellulase activity1.71E-02
104GO:0016758: transferase activity, transferring hexosyl groups1.94E-02
105GO:0008536: Ran GTPase binding2.14E-02
106GO:0009055: electron carrier activity2.18E-02
107GO:0030170: pyridoxal phosphate binding2.21E-02
108GO:0005355: glucose transmembrane transporter activity2.25E-02
109GO:0004872: receptor activity2.36E-02
110GO:0005515: protein binding2.46E-02
111GO:0015297: antiporter activity2.63E-02
112GO:0008194: UDP-glycosyltransferase activity3.08E-02
113GO:0016887: ATPase activity3.44E-02
114GO:0004683: calmodulin-dependent protein kinase activity3.62E-02
115GO:0030247: polysaccharide binding3.62E-02
116GO:0008236: serine-type peptidase activity3.76E-02
117GO:0008757: S-adenosylmethionine-dependent methyltransferase activity3.76E-02
118GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity3.90E-02
119GO:0008168: methyltransferase activity4.09E-02
120GO:0004222: metalloendopeptidase activity4.18E-02
121GO:0030145: manganese ion binding4.32E-02
122GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.32E-02
123GO:0003746: translation elongation factor activity4.61E-02
124GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.61E-02
125GO:0000987: core promoter proximal region sequence-specific DNA binding4.76E-02
126GO:0050660: flavin adenine dinucleotide binding4.89E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane9.38E-10
2GO:0005740: mitochondrial envelope1.82E-05
3GO:0005829: cytosol3.27E-05
4GO:0005758: mitochondrial intermembrane space7.44E-05
5GO:0005741: mitochondrial outer membrane1.00E-04
6GO:0005774: vacuolar membrane2.04E-04
7GO:0019773: proteasome core complex, alpha-subunit complex2.86E-04
8GO:0005901: caveola5.53E-04
9GO:0000015: phosphopyruvate hydratase complex5.53E-04
10GO:0005618: cell wall9.21E-04
11GO:0005839: proteasome core complex1.34E-03
12GO:0016021: integral component of membrane1.46E-03
13GO:0000502: proteasome complex1.69E-03
14GO:0030660: Golgi-associated vesicle membrane1.71E-03
15GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane1.71E-03
16GO:0005773: vacuole2.06E-03
17GO:0005801: cis-Golgi network3.24E-03
18GO:0005783: endoplasmic reticulum4.36E-03
19GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane4.44E-03
20GO:0046930: pore complex5.08E-03
21GO:0000148: 1,3-beta-D-glucan synthase complex5.08E-03
22GO:0048046: apoplast5.54E-03
23GO:0005765: lysosomal membrane7.96E-03
24GO:0008541: proteasome regulatory particle, lid subcomplex7.96E-03
25GO:0031012: extracellular matrix9.57E-03
26GO:0005750: mitochondrial respiratory chain complex III1.04E-02
27GO:0005635: nuclear envelope1.19E-02
28GO:0070469: respiratory chain1.41E-02
29GO:0015629: actin cytoskeleton1.71E-02
30GO:0005743: mitochondrial inner membrane1.82E-02
31GO:0031225: anchored component of membrane2.22E-02
32GO:0009504: cell plate2.36E-02
33GO:0005759: mitochondrial matrix2.50E-02
34GO:0016020: membrane2.66E-02
35GO:0009705: plant-type vacuole membrane2.75E-02
36GO:0005887: integral component of plasma membrane2.92E-02
37GO:0009507: chloroplast3.03E-02
38GO:0005788: endoplasmic reticulum lumen3.36E-02
39GO:0046658: anchored component of plasma membrane3.64E-02
40GO:0000151: ubiquitin ligase complex3.90E-02
41GO:0005643: nuclear pore3.90E-02
42GO:0005739: mitochondrion4.08E-02
43GO:0000325: plant-type vacuole4.32E-02
44GO:0009506: plasmodesma4.81E-02
Gene type



Gene DE type