co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G01120

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033494: ferulate metabolic process	0.00E+00
2	GO:0060416: response to growth hormone	0.00E+00
3	GO:0015976: carbon utilization	3.37E-08
4	GO:0010411: xyloglucan metabolic process	4.83E-06
5	GO:0006833: water transport	1.04E-05
6	GO:2000122: negative regulation of stomatal complex development	1.09E-05
7	GO:0010037: response to carbon dioxide	1.09E-05
8	GO:0009704: de-etiolation	6.75E-05
9	GO:0046520: sphingoid biosynthetic process	1.12E-04
10	GO:0071277: cellular response to calcium ion	1.12E-04
11	GO:0071370: cellular response to gibberellin stimulus	1.12E-04
12	GO:0006723: cuticle hydrocarbon biosynthetic process	1.12E-04
13	GO:0033481: galacturonate biosynthetic process	1.12E-04
14	GO:0010024: phytochromobilin biosynthetic process	2.61E-04
15	GO:0080148: negative regulation of response to water deprivation	2.61E-04
16	GO:0042546: cell wall biogenesis	2.94E-04
17	GO:0033591: response to L-ascorbic acid	4.32E-04
18	GO:0043447: alkane biosynthetic process	4.32E-04
19	GO:0006788: heme oxidation	4.32E-04
20	GO:0015840: urea transport	4.32E-04
21	GO:0015714: phosphoenolpyruvate transport	4.32E-04
22	GO:0006857: oligopeptide transport	4.50E-04
23	GO:0015979: photosynthesis	5.79E-04
24	GO:0055085: transmembrane transport	6.18E-04
25	GO:0006166: purine ribonucleoside salvage	6.19E-04
26	GO:0006168: adenine salvage	6.19E-04
27	GO:0034220: ion transmembrane transport	6.82E-04
28	GO:0006810: transport	6.85E-04
29	GO:0006183: GTP biosynthetic process	8.23E-04
30	GO:0015713: phosphoglycerate transport	8.23E-04
31	GO:0006749: glutathione metabolic process	8.23E-04
32	GO:0031122: cytoplasmic microtubule organization	8.23E-04
33	GO:0044209: AMP salvage	1.04E-03
34	GO:0032876: negative regulation of DNA endoreduplication	1.04E-03
35	GO:0000741: karyogamy	1.27E-03
36	GO:0006596: polyamine biosynthetic process	1.27E-03
37	GO:0048759: xylem vessel member cell differentiation	1.27E-03
38	GO:0071555: cell wall organization	1.39E-03
39	GO:0042372: phylloquinone biosynthetic process	1.52E-03
40	GO:0018298: protein-chromophore linkage	1.65E-03
41	GO:0050829: defense response to Gram-negative bacterium	1.78E-03
42	GO:0009407: toxin catabolic process	1.82E-03
43	GO:0010119: regulation of stomatal movement	1.91E-03
44	GO:0008610: lipid biosynthetic process	2.06E-03
45	GO:0030091: protein repair	2.06E-03
46	GO:0009850: auxin metabolic process	2.06E-03
47	GO:0009932: cell tip growth	2.35E-03
48	GO:0007389: pattern specification process	2.35E-03
49	GO:0090333: regulation of stomatal closure	2.66E-03
50	GO:0010205: photoinhibition	2.97E-03
51	GO:0009636: response to toxic substance	3.00E-03
52	GO:0019538: protein metabolic process	3.30E-03
53	GO:0009870: defense response signaling pathway, resistance gene-dependent	3.30E-03
54	GO:0043069: negative regulation of programmed cell death	3.30E-03
55	GO:1903507: negative regulation of nucleic acid-templated transcription	3.65E-03
56	GO:0009725: response to hormone	4.36E-03
57	GO:0006006: glucose metabolic process	4.36E-03
58	GO:0010143: cutin biosynthetic process	4.74E-03
59	GO:0019253: reductive pentose-phosphate cycle	4.74E-03
60	GO:0009225: nucleotide-sugar metabolic process	5.13E-03
61	GO:0009825: multidimensional cell growth	5.13E-03
62	GO:0005985: sucrose metabolic process	5.13E-03
63	GO:0010025: wax biosynthetic process	5.52E-03
64	GO:0006636: unsaturated fatty acid biosynthetic process	5.52E-03
65	GO:0006487: protein N-linked glycosylation	5.93E-03
66	GO:0009768: photosynthesis, light harvesting in photosystem I	6.35E-03
67	GO:0031408: oxylipin biosynthetic process	6.78E-03
68	GO:0016998: cell wall macromolecule catabolic process	6.78E-03
69	GO:2000022: regulation of jasmonic acid mediated signaling pathway	7.22E-03
70	GO:0019722: calcium-mediated signaling	8.13E-03
71	GO:0007623: circadian rhythm	8.80E-03
72	GO:0045490: pectin catabolic process	8.80E-03
73	GO:0042335: cuticle development	9.08E-03
74	GO:0080022: primary root development	9.08E-03
75	GO:0010051: xylem and phloem pattern formation	9.08E-03
76	GO:0010087: phloem or xylem histogenesis	9.08E-03
77	GO:0010197: polar nucleus fusion	9.57E-03
78	GO:0005975: carbohydrate metabolic process	1.11E-02
79	GO:0071554: cell wall organization or biogenesis	1.11E-02
80	GO:0010583: response to cyclopentenone	1.16E-02
81	GO:0048235: pollen sperm cell differentiation	1.16E-02
82	GO:1901657: glycosyl compound metabolic process	1.22E-02
83	GO:0007267: cell-cell signaling	1.33E-02
84	GO:0016126: sterol biosynthetic process	1.44E-02
85	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.50E-02
86	GO:0042128: nitrate assimilation	1.56E-02
87	GO:0016311: dephosphorylation	1.68E-02
88	GO:0080167: response to karrikin	1.69E-02
89	GO:0009817: defense response to fungus, incompatible interaction	1.74E-02
90	GO:0010218: response to far red light	1.86E-02
91	GO:0048527: lateral root development	1.93E-02
92	GO:0045454: cell redox homeostasis	2.03E-02
93	GO:0009867: jasmonic acid mediated signaling pathway	2.06E-02
94	GO:0009637: response to blue light	2.06E-02
95	GO:0006839: mitochondrial transport	2.25E-02
96	GO:0055114: oxidation-reduction process	2.29E-02
97	GO:0009414: response to water deprivation	2.31E-02
98	GO:0006631: fatty acid metabolic process	2.32E-02
99	GO:0009640: photomorphogenesis	2.46E-02
100	GO:0010114: response to red light	2.46E-02
101	GO:0009926: auxin polar transport	2.46E-02
102	GO:0009744: response to sucrose	2.46E-02
103	GO:0006629: lipid metabolic process	2.51E-02
104	GO:0009644: response to high light intensity	2.60E-02
105	GO:0008643: carbohydrate transport	2.60E-02
106	GO:0031347: regulation of defense response	2.82E-02
107	GO:0042538: hyperosmotic salinity response	2.89E-02
108	GO:0051603: proteolysis involved in cellular protein catabolic process	3.12E-02
109	GO:0006508: proteolysis	3.17E-02
110	GO:0006096: glycolytic process	3.43E-02
111	GO:0042545: cell wall modification	3.83E-02
112	GO:0018105: peptidyl-serine phosphorylation	3.99E-02
113	GO:0009742: brassinosteroid mediated signaling pathway	4.08E-02
114	GO:0009738: abscisic acid-activated signaling pathway	4.29E-02
115	GO:0009416: response to light stimulus	4.43E-02
116	GO:0009611: response to wounding	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0010487: thermospermine synthase activity	0.00E+00
2	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
3	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
4	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
5	GO:0004089: carbonate dehydratase activity	5.63E-06
6	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.49E-05
7	GO:0016762: xyloglucan:xyloglucosyl transferase activity	5.45E-05
8	GO:0015250: water channel activity	9.55E-05
9	GO:0000170: sphingosine hydroxylase activity	1.12E-04
10	GO:0030797: 24-methylenesterol C-methyltransferase activity	1.12E-04
11	GO:0080132: fatty acid alpha-hydroxylase activity	1.12E-04
12	GO:0015121: phosphoenolpyruvate:phosphate antiporter activity	1.12E-04
13	GO:0052638: indole-3-butyrate beta-glucosyltransferase activity	1.12E-04
14	GO:0008568: microtubule-severing ATPase activity	1.12E-04
15	GO:0015200: methylammonium transmembrane transporter activity	1.12E-04
16	GO:0016768: spermine synthase activity	1.12E-04
17	GO:0004328: formamidase activity	1.12E-04
18	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.22E-04
19	GO:0008794: arsenate reductase (glutaredoxin) activity	1.78E-04
20	GO:0003938: IMP dehydrogenase activity	2.61E-04
21	GO:0042284: sphingolipid delta-4 desaturase activity	2.61E-04
22	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	2.61E-04
23	GO:0050734: hydroxycinnamoyltransferase activity	4.32E-04
24	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	4.32E-04
25	GO:0001872: (1->3)-beta-D-glucan binding	6.19E-04
26	GO:0003999: adenine phosphoribosyltransferase activity	6.19E-04
27	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	6.19E-04
28	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	6.19E-04
29	GO:0052793: pectin acetylesterase activity	8.23E-04
30	GO:0050378: UDP-glucuronate 4-epimerase activity	8.23E-04
31	GO:0004392: heme oxygenase (decyclizing) activity	8.23E-04
32	GO:0015204: urea transmembrane transporter activity	8.23E-04
33	GO:0015120: phosphoglycerate transmembrane transporter activity	8.23E-04
34	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.14E-03
35	GO:0016413: O-acetyltransferase activity	1.21E-03
36	GO:0035673: oligopeptide transmembrane transporter activity	1.27E-03
37	GO:0016208: AMP binding	1.27E-03
38	GO:0008519: ammonium transmembrane transporter activity	1.27E-03
39	GO:0016168: chlorophyll binding	1.35E-03
40	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.52E-03
41	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	1.52E-03
42	GO:0004564: beta-fructofuranosidase activity	2.06E-03
43	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	2.35E-03
44	GO:0004364: glutathione transferase activity	2.57E-03
45	GO:0051537: 2 iron, 2 sulfur cluster binding	2.89E-03
46	GO:0004575: sucrose alpha-glucosidase activity	2.97E-03
47	GO:0052689: carboxylic ester hydrolase activity	3.26E-03
48	GO:0015198: oligopeptide transporter activity	4.00E-03
49	GO:0008081: phosphoric diester hydrolase activity	4.36E-03
50	GO:0004650: polygalacturonase activity	4.66E-03
51	GO:0030599: pectinesterase activity	4.80E-03
52	GO:0015035: protein disulfide oxidoreductase activity	5.25E-03
53	GO:0031409: pigment binding	5.52E-03
54	GO:0003714: transcription corepressor activity	5.93E-03
55	GO:0043424: protein histidine kinase binding	6.35E-03
56	GO:0003824: catalytic activity	6.79E-03
57	GO:0005215: transporter activity	6.87E-03
58	GO:0022891: substrate-specific transmembrane transporter activity	7.67E-03
59	GO:0030570: pectate lyase activity	7.67E-03
60	GO:0008514: organic anion transmembrane transporter activity	8.13E-03
61	GO:0016491: oxidoreductase activity	8.94E-03
62	GO:0004872: receptor activity	1.06E-02
63	GO:0008375: acetylglucosaminyltransferase activity	1.56E-02
64	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.56E-02
65	GO:0102483: scopolin beta-glucosidase activity	1.62E-02
66	GO:0030247: polysaccharide binding	1.62E-02
67	GO:0004683: calmodulin-dependent protein kinase activity	1.62E-02
68	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.68E-02
69	GO:0003993: acid phosphatase activity	2.12E-02
70	GO:0004871: signal transducer activity	2.13E-02
71	GO:0008422: beta-glucosidase activity	2.19E-02
72	GO:0050661: NADP binding	2.25E-02
73	GO:0005506: iron ion binding	2.34E-02
74	GO:0004185: serine-type carboxypeptidase activity	2.46E-02
75	GO:0015293: symporter activity	2.67E-02
76	GO:0009055: electron carrier activity	2.69E-02
77	GO:0051287: NAD binding	2.82E-02
78	GO:0045330: aspartyl esterase activity	3.27E-02
79	GO:0046872: metal ion binding	3.47E-02
80	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.67E-02
81	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.67E-02
82	GO:0022857: transmembrane transporter activity	3.75E-02
83	GO:0016758: transferase activity, transferring hexosyl groups	4.50E-02

Rank	GO Term	Adjusted P value
1	GO:0048046: apoplast	2.60E-08
2	GO:0005618: cell wall	3.03E-06
3	GO:0005576: extracellular region	8.41E-06
4	GO:0009505: plant-type cell wall	1.41E-05
5	GO:0005775: vacuolar lumen	6.19E-04
6	GO:0009941: chloroplast envelope	6.53E-04
7	GO:0005887: integral component of plasma membrane	1.35E-03
8	GO:0042807: central vacuole	1.78E-03
9	GO:0000326: protein storage vacuole	2.35E-03
10	GO:0031969: chloroplast membrane	2.88E-03
11	GO:0031225: anchored component of membrane	3.97E-03
12	GO:0016020: membrane	4.33E-03
13	GO:0030076: light-harvesting complex	5.13E-03
14	GO:0009507: chloroplast	5.32E-03
15	GO:0009535: chloroplast thylakoid membrane	5.71E-03
16	GO:0009506: plasmodesma	7.59E-03
17	GO:0009522: photosystem I	1.01E-02
18	GO:0009523: photosystem II	1.06E-02
19	GO:0005789: endoplasmic reticulum membrane	1.12E-02
20	GO:0046658: anchored component of plasma membrane	1.17E-02
21	GO:0009579: thylakoid	1.23E-02
22	GO:0032580: Golgi cisterna membrane	1.27E-02
23	GO:0010319: stromule	1.33E-02
24	GO:0005778: peroxisomal membrane	1.33E-02
25	GO:0005886: plasma membrane	1.38E-02
26	GO:0005794: Golgi apparatus	1.53E-02
27	GO:0000325: plant-type vacuole	1.93E-02
28	GO:0031902: late endosome membrane	2.32E-02
29	GO:0016021: integral component of membrane	2.49E-02
30	GO:0010287: plastoglobule	4.42E-02